RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
IRF3-229ENST00000601373 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
IRF3-229ENST00000601373 PBRM1Q86U86 1689 aa21.74■■□□□ 1.07
IRF3-229ENST00000601373 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
IRF3-229ENST00000601373 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
IRF3-229ENST00000601373 CLIP1P30622 1438 aa21.69■■□□□ 1.06
IRF3-229ENST00000601373 CLASP1Q7Z460 1538 aa21.67■■□□□ 1.06
IRF3-229ENST00000601373 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
IRF3-229ENST00000601373 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
IRF3-229ENST00000601373 ADAMTS12P58397 1594 aa21.64■■□□□ 1.05
IRF3-229ENST00000601373 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
IRF3-229ENST00000601373 CTTNBP2Q8WZ74 1663 aa21.55■■□□□ 1.04
IRF3-229ENST00000601373 RANGAP1P46060 587 aaPredicted RBP21.54■■□□□ 1.04
IRF3-229ENST00000601373 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
IRF3-229ENST00000601373 GRIN2AQ12879 1464 aa21.49■■□□□ 1.03
IRF3-229ENST00000601373 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
IRF3-229ENST00000601373 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
IRF3-229ENST00000601373 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
IRF3-229ENST00000601373 IQGAP2Q13576 1575 aa21.39■■□□□ 1.01
IRF3-229ENST00000601373 APLP2Q06481 763 aa21.36■■□□□ 1.01
IRF3-229ENST00000601373 NUP160Q12769 1436 aa21.35■■□□□ 1.01
IRF3-229ENST00000601373 SAMD9Q5K651 1589 aa21.33■■□□□ 1.01
IRF3-229ENST00000601373 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
IRF3-229ENST00000601373 CEP170Q5SW79 1584 aa21.31■■□□□ 1
IRF3-229ENST00000601373 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
IRF3-229ENST00000601373 P3H3Q8IVL6 736 aa21.3■■□□□ 1
IRF3-229ENST00000601373 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
IRF3-229ENST00000601373 FMN1Q68DA7 1419 aa21.28■■□□□ 1
IRF3-229ENST00000601373 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
IRF3-229ENST00000601373 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
IRF3-229ENST00000601373 PPARGC1BQ86YN6 1023 aaKnown RBP21.2■□□□□ 0.98
IRF3-229ENST00000601373 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
IRF3-229ENST00000601373 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
IRF3-229ENST00000601373 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
IRF3-229ENST00000601373 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
IRF3-229ENST00000601373 FYCO1Q9BQS8 1478 aa21.18■□□□□ 0.98
IRF3-229ENST00000601373 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
IRF3-229ENST00000601373 DISP1Q96F81 1524 aa21.17■□□□□ 0.98
IRF3-229ENST00000601373 KIAA0556O60303 1618 aa21.16■□□□□ 0.98
IRF3-229ENST00000601373 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
IRF3-229ENST00000601373 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
IRF3-229ENST00000601373 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
IRF3-229ENST00000601373 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.97
IRF3-229ENST00000601373 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
IRF3-229ENST00000601373 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
IRF3-229ENST00000601373 KIF13AQ9H1H9 1805 aa21.05■□□□□ 0.96
IRF3-229ENST00000601373 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
IRF3-229ENST00000601373 CFAP43Q8NDM7 1665 aa21.03■□□□□ 0.96
IRF3-229ENST00000601373 HECW1Q76N89 1606 aa21.02■□□□□ 0.96
IRF3-229ENST00000601373 ABCC10Q5T3U5 1492 aa21.01■□□□□ 0.95
IRF3-229ENST00000601373 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
IRF3-229ENST00000601373 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
IRF3-229ENST00000601373 FAM69CQ0P6D2 419 aa21■□□□□ 0.95
IRF3-229ENST00000601373 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
IRF3-229ENST00000601373 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
IRF3-229ENST00000601373 PTPRGP23470 1445 aa20.95■□□□□ 0.94
IRF3-229ENST00000601373 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
IRF3-229ENST00000601373 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
IRF3-229ENST00000601373 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
IRF3-229ENST00000601373 DIP2BQ9P265 1576 aa20.89■□□□□ 0.93
IRF3-229ENST00000601373 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
IRF3-229ENST00000601373 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
IRF3-229ENST00000601373 CDK11AQ9UQ88 783 aaPredicted RBP20.88■□□□□ 0.93
IRF3-229ENST00000601373 ABCA8O94911 1581 aa20.88■□□□□ 0.93
IRF3-229ENST00000601373 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
IRF3-229ENST00000601373 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
IRF3-229ENST00000601373 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
IRF3-229ENST00000601373 CDK13Q14004 1512 aaKnown RBP20.83■□□□□ 0.92
IRF3-229ENST00000601373 UACAQ9BZF9 1416 aa20.82■□□□□ 0.92
IRF3-229ENST00000601373 KDM6BO15054 1643 aa20.82■□□□□ 0.92
IRF3-229ENST00000601373 KDM4FA0A1W2PPD8 638 aa20.8■□□□□ 0.92
IRF3-229ENST00000601373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
IRF3-229ENST00000601373 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
IRF3-229ENST00000601373 SUPT6HQ7KZ85 1726 aaKnown RBP20.79■□□□□ 0.92
IRF3-229ENST00000601373 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
IRF3-229ENST00000601373 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
IRF3-229ENST00000601373 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
IRF3-229ENST00000601373 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
IRF3-229ENST00000601373 ATP10BO94823 1461 aa20.75■□□□□ 0.91
IRF3-229ENST00000601373 NCOA2Q15596 1464 aa20.75■□□□□ 0.91
IRF3-229ENST00000601373 TROQ12816 1431 aaPredicted RBP20.73■□□□□ 0.91
IRF3-229ENST00000601373 PLEKHD1A6NEE1 506 aa20.73■□□□□ 0.91
IRF3-229ENST00000601373 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
IRF3-229ENST00000601373 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
IRF3-229ENST00000601373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.72■□□□□ 0.913e-6■□□□□ 11.3
IRF3-229ENST00000601373 MYOM3Q5VTT5 1437 aa20.7■□□□□ 0.9
IRF3-229ENST00000601373 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
IRF3-229ENST00000601373 TSPOAP1O95153 1857 aa20.67■□□□□ 0.9
IRF3-229ENST00000601373 GLI2P10070 1586 aa20.64■□□□□ 0.9
IRF3-229ENST00000601373 MIA2Q96PC5 1412 aa20.63■□□□□ 0.89
IRF3-229ENST00000601373 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
IRF3-229ENST00000601373 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
IRF3-229ENST00000601373 ASXL2Q76L83 1435 aa20.61■□□□□ 0.89
IRF3-229ENST00000601373 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
IRF3-229ENST00000601373 ILDR1Q86SU0 546 aaPredicted RBP20.58■□□□□ 0.89
IRF3-229ENST00000601373 KIF14Q15058 1648 aa20.57■□□□□ 0.88
IRF3-229ENST00000601373 TCOF1Q13428 1488 aaKnown RBP20.56■□□□□ 0.88
IRF3-229ENST00000601373 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
IRF3-229ENST00000601373 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
IRF3-229ENST00000601373 ADGRL1O94910 1474 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms