RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 FHOD3Q2V2M9 1422 aa18.1■□□□□ 0.49
NOTCH3-206ENST00000601011 FOXD1Q16676 465 aa18.09■□□□□ 0.49
NOTCH3-206ENST00000601011 IGF1RP08069 1367 aa18.06■□□□□ 0.48
NOTCH3-206ENST00000601011 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
NOTCH3-206ENST00000601011 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
NOTCH3-206ENST00000601011 NEFLP07196 543 aa18.03■□□□□ 0.48
NOTCH3-206ENST00000601011 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
NOTCH3-206ENST00000601011 NCAPD3P42695 1498 aa18.02■□□□□ 0.47
NOTCH3-206ENST00000601011 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
NOTCH3-206ENST00000601011 CUX1P39880 1505 aa18.01■□□□□ 0.47
NOTCH3-206ENST00000601011 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
NOTCH3-206ENST00000601011 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
NOTCH3-206ENST00000601011 KIF21BO75037 1637 aa17.98■□□□□ 0.47
NOTCH3-206ENST00000601011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
NOTCH3-206ENST00000601011 KDM2AQ9Y2K7 1162 aa17.94■□□□□ 0.46
NOTCH3-206ENST00000601011 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
NOTCH3-206ENST00000601011 ANP32CO43423 234 aa17.92■□□□□ 0.46
NOTCH3-206ENST00000601011 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
NOTCH3-206ENST00000601011 IRX6P78412 446 aaPredicted RBP17.91■□□□□ 0.46
NOTCH3-206ENST00000601011 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
NOTCH3-206ENST00000601011 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
NOTCH3-206ENST00000601011 CFTRP13569 1480 aa17.9■□□□□ 0.46
NOTCH3-206ENST00000601011 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
NOTCH3-206ENST00000601011 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
NOTCH3-206ENST00000601011 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
NOTCH3-206ENST00000601011 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
NOTCH3-206ENST00000601011 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
NOTCH3-206ENST00000601011 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
NOTCH3-206ENST00000601011 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
NOTCH3-206ENST00000601011 ERCC6Q03468 1493 aa17.81■□□□□ 0.44
NOTCH3-206ENST00000601011 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
NOTCH3-206ENST00000601011 FKBP8Q14318 412 aa17.8■□□□□ 0.44
NOTCH3-206ENST00000601011 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
NOTCH3-206ENST00000601011 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
NOTCH3-206ENST00000601011 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
NOTCH3-206ENST00000601011 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
NOTCH3-206ENST00000601011 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
NOTCH3-206ENST00000601011 CFDP1Q9UEE9 299 aaPredicted RBP17.74■□□□□ 0.43
NOTCH3-206ENST00000601011 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
NOTCH3-206ENST00000601011 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
NOTCH3-206ENST00000601011 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
NOTCH3-206ENST00000601011 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
NOTCH3-206ENST00000601011 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
NOTCH3-206ENST00000601011 CHGAP10645 457 aaKnown RBP17.68■□□□□ 0.42
NOTCH3-206ENST00000601011 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
NOTCH3-206ENST00000601011 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
NOTCH3-206ENST00000601011 TOPBP1Q92547 1522 aa17.64■□□□□ 0.41
NOTCH3-206ENST00000601011 PLEKHD1A6NEE1 506 aa17.63■□□□□ 0.41
NOTCH3-206ENST00000601011 TSPY4P0CV99 314 aa17.63■□□□□ 0.41
NOTCH3-206ENST00000601011 TSPY10P0CW01 314 aa17.63■□□□□ 0.41
NOTCH3-206ENST00000601011 MRS2Q9HD23 443 aa17.58■□□□□ 0.4
NOTCH3-206ENST00000601011 PPP1R15AO75807 674 aaPredicted RBP17.58■□□□□ 0.4
NOTCH3-206ENST00000601011 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
NOTCH3-206ENST00000601011 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
NOTCH3-206ENST00000601011 JPH4Q96JJ6 628 aa17.57■□□□□ 0.4
NOTCH3-206ENST00000601011 MPHOSPH9Q99550 1183 aa17.56■□□□□ 0.4
NOTCH3-206ENST00000601011 L3MBTL2Q969R5 705 aa17.56■□□□□ 0.4
NOTCH3-206ENST00000601011 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
NOTCH3-206ENST00000601011 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
NOTCH3-206ENST00000601011 EIF4G2P78344 907 aaKnown RBP eCLIP17.54■□□□□ 0.4
NOTCH3-206ENST00000601011 FMN1Q68DA7 1419 aa17.54■□□□□ 0.4
NOTCH3-206ENST00000601011 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.39
NOTCH3-206ENST00000601011 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.39
NOTCH3-206ENST00000601011 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
NOTCH3-206ENST00000601011 PKD2Q13563 968 aa17.5■□□□□ 0.39
NOTCH3-206ENST00000601011 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
NOTCH3-206ENST00000601011 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
NOTCH3-206ENST00000601011 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
NOTCH3-206ENST00000601011 DCAF11Q8TEB1 546 aa17.46■□□□□ 0.38
NOTCH3-206ENST00000601011 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
NOTCH3-206ENST00000601011 NBR1Q14596 966 aa17.43■□□□□ 0.38
NOTCH3-206ENST00000601011 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
NOTCH3-206ENST00000601011 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
NOTCH3-206ENST00000601011 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
NOTCH3-206ENST00000601011 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
NOTCH3-206ENST00000601011 CDK13Q14004 1512 aaKnown RBP17.41■□□□□ 0.38
NOTCH3-206ENST00000601011 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
NOTCH3-206ENST00000601011 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
NOTCH3-206ENST00000601011 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
NOTCH3-206ENST00000601011 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
NOTCH3-206ENST00000601011 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
NOTCH3-206ENST00000601011 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
NOTCH3-206ENST00000601011 PTPRKQ15262 1439 aa17.35■□□□□ 0.37
NOTCH3-206ENST00000601011 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
NOTCH3-206ENST00000601011 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
NOTCH3-206ENST00000601011 NUP155O75694 1391 aa17.34■□□□□ 0.37
NOTCH3-206ENST00000601011 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
NOTCH3-206ENST00000601011 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
NOTCH3-206ENST00000601011 WDR97A6NE52 1622 aa17.33■□□□□ 0.36
NOTCH3-206ENST00000601011 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
NOTCH3-206ENST00000601011 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
NOTCH3-206ENST00000601011 NPM1P06748 294 aaKnown RBP eCLIP17.32■□□□□ 0.36
NOTCH3-206ENST00000601011 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
NOTCH3-206ENST00000601011 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
NOTCH3-206ENST00000601011 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
NOTCH3-206ENST00000601011 MYOM3Q5VTT5 1437 aa17.31■□□□□ 0.36
NOTCH3-206ENST00000601011 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
NOTCH3-206ENST00000601011 NBPF8Q3BBV2 869 aa17.3■□□□□ 0.36
NOTCH3-206ENST00000601011 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
NOTCH3-206ENST00000601011 C11orf95C9JLR9 678 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms