RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-216ENST00000599335 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
SUPT5H-216ENST00000599335 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
SUPT5H-216ENST00000599335 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
SUPT5H-216ENST00000599335 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
SUPT5H-216ENST00000599335 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
SUPT5H-216ENST00000599335 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
SUPT5H-216ENST00000599335 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
SUPT5H-216ENST00000599335 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
SUPT5H-216ENST00000599335 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
SUPT5H-216ENST00000599335 CLIP1P30622 1438 aa16.71■□□□□ 0.27
SUPT5H-216ENST00000599335 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
SUPT5H-216ENST00000599335 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
SUPT5H-216ENST00000599335 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
SUPT5H-216ENST00000599335 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
SUPT5H-216ENST00000599335 ITGAEP38570 1179 aa16.64■□□□□ 0.25
SUPT5H-216ENST00000599335 ANP32EQ9BTT0 268 aa16.64■□□□□ 0.25
SUPT5H-216ENST00000599335 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
SUPT5H-216ENST00000599335 PODXL2Q9NZ53 605 aa16.61■□□□□ 0.25
SUPT5H-216ENST00000599335 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
SUPT5H-216ENST00000599335 JPH4Q96JJ6 628 aa16.6■□□□□ 0.25
SUPT5H-216ENST00000599335 KIF21BO75037 1637 aa16.57■□□□□ 0.24
SUPT5H-216ENST00000599335 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
SUPT5H-216ENST00000599335 KANK4Q5T7N3 995 aaPredicted RBP16.53■□□□□ 0.24
SUPT5H-216ENST00000599335 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
SUPT5H-216ENST00000599335 ZNF777Q9ULD5 760 aaPredicted RBP16.52■□□□□ 0.23
SUPT5H-216ENST00000599335 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
SUPT5H-216ENST00000599335 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
SUPT5H-216ENST00000599335 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
SUPT5H-216ENST00000599335 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
SUPT5H-216ENST00000599335 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
SUPT5H-216ENST00000599335 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
SUPT5H-216ENST00000599335 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
SUPT5H-216ENST00000599335 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
SUPT5H-216ENST00000599335 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
SUPT5H-216ENST00000599335 WDR62O43379 1518 aa16.44■□□□□ 0.22
SUPT5H-216ENST00000599335 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
SUPT5H-216ENST00000599335 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
SUPT5H-216ENST00000599335 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
SUPT5H-216ENST00000599335 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
SUPT5H-216ENST00000599335 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
SUPT5H-216ENST00000599335 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
SUPT5H-216ENST00000599335 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
SUPT5H-216ENST00000599335 PKNOX2Q96KN3 472 aa16.31■□□□□ 0.2
SUPT5H-216ENST00000599335 DIEXFQ68CQ4 756 aaKnown RBP16.31■□□□□ 0.2
SUPT5H-216ENST00000599335 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
SUPT5H-216ENST00000599335 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
SUPT5H-216ENST00000599335 PRG4Q92954 1404 aaPredicted RBP16.29■□□□□ 0.2
SUPT5H-216ENST00000599335 CDK11AQ9UQ88 783 aaPredicted RBP16.27■□□□□ 0.2
SUPT5H-216ENST00000599335 PTPRGP23470 1445 aa16.27■□□□□ 0.19
SUPT5H-216ENST00000599335 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.19
SUPT5H-216ENST00000599335 CARMIL2Q6F5E8 1435 aa16.26■□□□□ 0.19
SUPT5H-216ENST00000599335 CUL7Q14999 1698 aa16.25■□□□□ 0.19
SUPT5H-216ENST00000599335 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
SUPT5H-216ENST00000599335 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
SUPT5H-216ENST00000599335 FAM69CQ0P6D2 419 aa16.23■□□□□ 0.19
SUPT5H-216ENST00000599335 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
SUPT5H-216ENST00000599335 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
SUPT5H-216ENST00000599335 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
SUPT5H-216ENST00000599335 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
SUPT5H-216ENST00000599335 CHIC2Q9UKJ5 165 aa16.19■□□□□ 0.18
SUPT5H-216ENST00000599335 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
SUPT5H-216ENST00000599335 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
SUPT5H-216ENST00000599335 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
SUPT5H-216ENST00000599335 MLECQ14165 292 aa16.13■□□□□ 0.17
SUPT5H-216ENST00000599335 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
SUPT5H-216ENST00000599335 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
SUPT5H-216ENST00000599335 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
SUPT5H-216ENST00000599335 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
SUPT5H-216ENST00000599335 NEFLP07196 543 aa16.11■□□□□ 0.17
SUPT5H-216ENST00000599335 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
SUPT5H-216ENST00000599335 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
SUPT5H-216ENST00000599335 CTTNBP2Q8WZ74 1663 aa16.1■□□□□ 0.17
SUPT5H-216ENST00000599335 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
SUPT5H-216ENST00000599335 PHLDB1Q86UU1 1377 aa16.09■□□□□ 0.17
SUPT5H-216ENST00000599335 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
SUPT5H-216ENST00000599335 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
SUPT5H-216ENST00000599335 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
SUPT5H-216ENST00000599335 DISP1Q96F81 1524 aa16.05■□□□□ 0.16
SUPT5H-216ENST00000599335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.169e-7■■■■□ 20.9
SUPT5H-216ENST00000599335 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
SUPT5H-216ENST00000599335 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
SUPT5H-216ENST00000599335 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
SUPT5H-216ENST00000599335 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.15
SUPT5H-216ENST00000599335 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
SUPT5H-216ENST00000599335 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
SUPT5H-216ENST00000599335 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
SUPT5H-216ENST00000599335 NUP160Q12769 1436 aa16.01■□□□□ 0.15
SUPT5H-216ENST00000599335 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
SUPT5H-216ENST00000599335 TIAM1Q13009 1591 aa16■□□□□ 0.15
SUPT5H-216ENST00000599335 RRBP1Q9P2E9 1410 aaKnown RBP16■□□□□ 0.15
SUPT5H-216ENST00000599335 ZNF644Q9H582 1327 aaPredicted RBP15.99■□□□□ 0.15
SUPT5H-216ENST00000599335 ESF1Q9H501 851 aaKnown RBP15.98■□□□□ 0.15
SUPT5H-216ENST00000599335 SAMD9Q5K651 1589 aa15.98■□□□□ 0.15
SUPT5H-216ENST00000599335 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
SUPT5H-216ENST00000599335 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
SUPT5H-216ENST00000599335 PDE4CQ08493 712 aa15.97■□□□□ 0.15
SUPT5H-216ENST00000599335 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.14
SUPT5H-216ENST00000599335 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
SUPT5H-216ENST00000599335 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
SUPT5H-216ENST00000599335 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms