RNA–Protein interactions for RNA: ENST00000598996.2

FENDRR-205, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 1 (best)

Gene FENDRR, Length 2,835 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-205ENST00000598996 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
FENDRR-205ENST00000598996 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
FENDRR-205ENST00000598996 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
FENDRR-205ENST00000598996 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
FENDRR-205ENST00000598996 MIER1Q8N108 512 aa13.15□□□□□ -0.3
FENDRR-205ENST00000598996 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
FENDRR-205ENST00000598996 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
FENDRR-205ENST00000598996 CUL7Q14999 1698 aa13.14□□□□□ -0.31
FENDRR-205ENST00000598996 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
FENDRR-205ENST00000598996 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
FENDRR-205ENST00000598996 CTTNBP2Q8WZ74 1663 aa13.13□□□□□ -0.31
FENDRR-205ENST00000598996 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
FENDRR-205ENST00000598996 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
FENDRR-205ENST00000598996 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
FENDRR-205ENST00000598996 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
FENDRR-205ENST00000598996 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
FENDRR-205ENST00000598996 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
FENDRR-205ENST00000598996 NESP48681 1621 aa13.09□□□□□ -0.31
FENDRR-205ENST00000598996 LAMC3Q9Y6N6 1575 aa13.08□□□□□ -0.31
FENDRR-205ENST00000598996 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
FENDRR-205ENST00000598996 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
FENDRR-205ENST00000598996 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
FENDRR-205ENST00000598996 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
FENDRR-205ENST00000598996 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
FENDRR-205ENST00000598996 ITGAEP38570 1179 aa13.05□□□□□ -0.32
FENDRR-205ENST00000598996 MAPKBP1O60336 1514 aa13.04□□□□□ -0.32
FENDRR-205ENST00000598996 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
FENDRR-205ENST00000598996 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
FENDRR-205ENST00000598996 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
FENDRR-205ENST00000598996 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
FENDRR-205ENST00000598996 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
FENDRR-205ENST00000598996 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
FENDRR-205ENST00000598996 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
FENDRR-205ENST00000598996 ADRA2BP18089 450 aa13□□□□□ -0.33
FENDRR-205ENST00000598996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
FENDRR-205ENST00000598996 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
FENDRR-205ENST00000598996 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
FENDRR-205ENST00000598996 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
FENDRR-205ENST00000598996 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
FENDRR-205ENST00000598996 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
FENDRR-205ENST00000598996 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
FENDRR-205ENST00000598996 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
FENDRR-205ENST00000598996 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.34
FENDRR-205ENST00000598996 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
FENDRR-205ENST00000598996 PDS5BQ9NTI5 1447 aa12.95□□□□□ -0.34
FENDRR-205ENST00000598996 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
FENDRR-205ENST00000598996 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
FENDRR-205ENST00000598996 FGD6Q6ZV73 1430 aa12.91□□□□□ -0.34
FENDRR-205ENST00000598996 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
FENDRR-205ENST00000598996 SENP3Q9H4L4 574 aaPredicted RBP12.91□□□□□ -0.34
FENDRR-205ENST00000598996 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
FENDRR-205ENST00000598996 GRIN2BQ13224 1484 aa12.9□□□□□ -0.34
FENDRR-205ENST00000598996 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
FENDRR-205ENST00000598996 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
FENDRR-205ENST00000598996 MTUS2Q5JR59 1369 aa12.88□□□□□ -0.35
FENDRR-205ENST00000598996 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
FENDRR-205ENST00000598996 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
FENDRR-205ENST00000598996 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
FENDRR-205ENST00000598996 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
FENDRR-205ENST00000598996 PTPN23Q9H3S7 1636 aa12.85□□□□□ -0.35
FENDRR-205ENST00000598996 HFM1A2PYH4 1435 aa12.84□□□□□ -0.35
FENDRR-205ENST00000598996 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
FENDRR-205ENST00000598996 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
FENDRR-205ENST00000598996 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
FENDRR-205ENST00000598996 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
FENDRR-205ENST00000598996 PTPRKQ15262 1439 aa12.82□□□□□ -0.36
FENDRR-205ENST00000598996 UACAQ9BZF9 1416 aa12.81□□□□□ -0.36
FENDRR-205ENST00000598996 HECW1Q76N89 1606 aa12.81□□□□□ -0.36
FENDRR-205ENST00000598996 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
FENDRR-205ENST00000598996 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
FENDRR-205ENST00000598996 PPP1R15AO75807 674 aaPredicted RBP12.8□□□□□ -0.36
FENDRR-205ENST00000598996 MAGI3Q5TCQ9 1506 aa12.79□□□□□ -0.36
FENDRR-205ENST00000598996 NAIPQ13075 1403 aa12.79□□□□□ -0.36
FENDRR-205ENST00000598996 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
FENDRR-205ENST00000598996 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.37
FENDRR-205ENST00000598996 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
FENDRR-205ENST00000598996 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
FENDRR-205ENST00000598996 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
FENDRR-205ENST00000598996 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
FENDRR-205ENST00000598996 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
FENDRR-205ENST00000598996 WDR62O43379 1518 aa12.74□□□□□ -0.37
FENDRR-205ENST00000598996 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
FENDRR-205ENST00000598996 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
FENDRR-205ENST00000598996 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
FENDRR-205ENST00000598996 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
FENDRR-205ENST00000598996 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
FENDRR-205ENST00000598996 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
FENDRR-205ENST00000598996 KDM5BQ9UGL1 1544 aa12.69□□□□□ -0.38
FENDRR-205ENST00000598996 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
FENDRR-205ENST00000598996 KIAA0556O60303 1618 aa12.67□□□□□ -0.38
FENDRR-205ENST00000598996 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
FENDRR-205ENST00000598996 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
FENDRR-205ENST00000598996 KDM6BO15054 1643 aa12.66□□□□□ -0.38
FENDRR-205ENST00000598996 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
FENDRR-205ENST00000598996 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
FENDRR-205ENST00000598996 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
FENDRR-205ENST00000598996 RRP7BPQ9NSQ0 103 aa12.65□□□□□ -0.38
FENDRR-205ENST00000598996 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
FENDRR-205ENST00000598996 ANP32CO43423 234 aa12.63□□□□□ -0.39
FENDRR-205ENST00000598996 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms