RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 FBLN2P98095 1184 aa17.64■□□□□ 0.41
LINC00343-205ENST00000598229 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
LINC00343-205ENST00000598229 CHD1O14646 1710 aa17.58■□□□□ 0.41
LINC00343-205ENST00000598229 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.41
LINC00343-205ENST00000598229 ABCB7O75027 752 aa17.58■□□□□ 0.4
LINC00343-205ENST00000598229 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
LINC00343-205ENST00000598229 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
LINC00343-205ENST00000598229 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
LINC00343-205ENST00000598229 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
LINC00343-205ENST00000598229 SOGA1O94964 1423 aa17.47■□□□□ 0.39
LINC00343-205ENST00000598229 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
LINC00343-205ENST00000598229 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
LINC00343-205ENST00000598229 SNAPC4Q5SXM2 1469 aa17.43■□□□□ 0.38
LINC00343-205ENST00000598229 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
LINC00343-205ENST00000598229 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
LINC00343-205ENST00000598229 MAGI1Q96QZ7 1491 aaPredicted RBP17.42■□□□□ 0.38
LINC00343-205ENST00000598229 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
LINC00343-205ENST00000598229 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
LINC00343-205ENST00000598229 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
LINC00343-205ENST00000598229 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
LINC00343-205ENST00000598229 POLA2Q14181 598 aa17.28■□□□□ 0.36
LINC00343-205ENST00000598229 CUX1P39880 1505 aa17.22■□□□□ 0.35
LINC00343-205ENST00000598229 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
LINC00343-205ENST00000598229 POTEHQ6S545 545 aa17.14■□□□□ 0.33
LINC00343-205ENST00000598229 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
LINC00343-205ENST00000598229 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
LINC00343-205ENST00000598229 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
LINC00343-205ENST00000598229 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
LINC00343-205ENST00000598229 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
LINC00343-205ENST00000598229 NUP160Q12769 1436 aa17.11■□□□□ 0.33
LINC00343-205ENST00000598229 ZBTB22O15209 634 aa17.1■□□□□ 0.33
LINC00343-205ENST00000598229 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
LINC00343-205ENST00000598229 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
LINC00343-205ENST00000598229 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
LINC00343-205ENST00000598229 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
LINC00343-205ENST00000598229 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
LINC00343-205ENST00000598229 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
LINC00343-205ENST00000598229 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
LINC00343-205ENST00000598229 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
LINC00343-205ENST00000598229 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
LINC00343-205ENST00000598229 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
LINC00343-205ENST00000598229 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
LINC00343-205ENST00000598229 KDM4FA0A1W2PPD8 638 aa16.98■□□□□ 0.31
LINC00343-205ENST00000598229 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00343-205ENST00000598229 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
LINC00343-205ENST00000598229 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
LINC00343-205ENST00000598229 ILDR1Q86SU0 546 aaPredicted RBP16.96■□□□□ 0.31
LINC00343-205ENST00000598229 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
LINC00343-205ENST00000598229 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
LINC00343-205ENST00000598229 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
LINC00343-205ENST00000598229 KDM6BO15054 1643 aa16.82■□□□□ 0.28
LINC00343-205ENST00000598229 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
LINC00343-205ENST00000598229 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
LINC00343-205ENST00000598229 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
LINC00343-205ENST00000598229 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
LINC00343-205ENST00000598229 RUSC2Q8N2Y8 1516 aa16.75■□□□□ 0.27
LINC00343-205ENST00000598229 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
LINC00343-205ENST00000598229 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
LINC00343-205ENST00000598229 PTPRGP23470 1445 aa16.68■□□□□ 0.26
LINC00343-205ENST00000598229 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
LINC00343-205ENST00000598229 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
LINC00343-205ENST00000598229 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
LINC00343-205ENST00000598229 IGF1RP08069 1367 aa16.64■□□□□ 0.25
LINC00343-205ENST00000598229 GLI2P10070 1586 aa16.63■□□□□ 0.25
LINC00343-205ENST00000598229 ABCC2Q92887 1545 aa16.62■□□□□ 0.25
LINC00343-205ENST00000598229 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
LINC00343-205ENST00000598229 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
LINC00343-205ENST00000598229 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
LINC00343-205ENST00000598229 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
LINC00343-205ENST00000598229 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
LINC00343-205ENST00000598229 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
LINC00343-205ENST00000598229 UHRF1BP1LA0JNW5 1464 aa16.56■□□□□ 0.24
LINC00343-205ENST00000598229 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
LINC00343-205ENST00000598229 PPRC1Q5VV67 1664 aaKnown RBP16.55■□□□□ 0.24
LINC00343-205ENST00000598229 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
LINC00343-205ENST00000598229 TEX14Q8IWB6 1497 aa16.52■□□□□ 0.23
LINC00343-205ENST00000598229 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
LINC00343-205ENST00000598229 TTBK1Q5TCY1 1321 aaPredicted RBP16.51■□□□□ 0.23
LINC00343-205ENST00000598229 CUL7Q14999 1698 aa16.51■□□□□ 0.23
LINC00343-205ENST00000598229 EPRSP07814 1512 aaKnown RBP16.5■□□□□ 0.23
LINC00343-205ENST00000598229 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
LINC00343-205ENST00000598229 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
LINC00343-205ENST00000598229 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
LINC00343-205ENST00000598229 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
LINC00343-205ENST00000598229 SPDYE2Q495Y8 402 aa16.48■□□□□ 0.23
LINC00343-205ENST00000598229 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
LINC00343-205ENST00000598229 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
LINC00343-205ENST00000598229 DISP1Q96F81 1524 aa16.41■□□□□ 0.22
LINC00343-205ENST00000598229 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
LINC00343-205ENST00000598229 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
LINC00343-205ENST00000598229 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
LINC00343-205ENST00000598229 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
LINC00343-205ENST00000598229 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
LINC00343-205ENST00000598229 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
LINC00343-205ENST00000598229 CD109Q6YHK3 1445 aa16.35■□□□□ 0.21
LINC00343-205ENST00000598229 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
LINC00343-205ENST00000598229 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
LINC00343-205ENST00000598229 PIP4P2Q8N4L2 257 aa16.32■□□□□ 0.2
LINC00343-205ENST00000598229 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
LINC00343-205ENST00000598229 ARAP3Q8WWN8 1544 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms