RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
SMG9-204ENST00000596714 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SMG9-204ENST00000596714 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SMG9-204ENST00000596714 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
SMG9-204ENST00000596714 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
SMG9-204ENST00000596714 KIF21BO75037 1637 aa28.51■■■□□ 2.15
SMG9-204ENST00000596714 IQGAP2Q13576 1575 aa28.5■■■□□ 2.15
SMG9-204ENST00000596714 CTTNBP2Q8WZ74 1663 aa28.47■■■□□ 2.15
SMG9-204ENST00000596714 PRG4Q92954 1404 aaPredicted RBP28.46■■■□□ 2.15
SMG9-204ENST00000596714 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
SMG9-204ENST00000596714 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
SMG9-204ENST00000596714 ERCC6L2Q5T890 1561 aa28.37■■■□□ 2.13
SMG9-204ENST00000596714 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
SMG9-204ENST00000596714 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
SMG9-204ENST00000596714 UGGT2Q9NYU1 1516 aa28.33■■■□□ 2.13
SMG9-204ENST00000596714 UBTFP17480 764 aaKnown RBP28.32■■■□□ 2.12
SMG9-204ENST00000596714 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
SMG9-204ENST00000596714 DISP1Q96F81 1524 aa28.23■■■□□ 2.11
SMG9-204ENST00000596714 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
SMG9-204ENST00000596714 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
SMG9-204ENST00000596714 PTPRGP23470 1445 aa28.17■■■□□ 2.1
SMG9-204ENST00000596714 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.1
SMG9-204ENST00000596714 TTBK1Q5TCY1 1321 aaPredicted RBP28.14■■■□□ 2.09
SMG9-204ENST00000596714 SAMD9Q5K651 1589 aa28.09■■■□□ 2.09
SMG9-204ENST00000596714 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.08
SMG9-204ENST00000596714 P3H3Q8IVL6 736 aa28.05■■■□□ 2.08
SMG9-204ENST00000596714 NPM1P06748 294 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMG9-204ENST00000596714 UACAQ9BZF9 1416 aa27.98■■■□□ 2.07
SMG9-204ENST00000596714 ADCY10Q96PN6 1610 aa27.96■■■□□ 2.07
SMG9-204ENST00000596714 FHOD3Q2V2M9 1422 aa27.94■■■□□ 2.06
SMG9-204ENST00000596714 UHRF1BP1LA0JNW5 1464 aa27.93■■■□□ 2.06
SMG9-204ENST00000596714 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
SMG9-204ENST00000596714 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
SMG9-204ENST00000596714 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
SMG9-204ENST00000596714 PLB1Q6P1J6 1458 aa27.89■■■□□ 2.05
SMG9-204ENST00000596714 CLIP1P30622 1438 aa27.88■■■□□ 2.05
SMG9-204ENST00000596714 ABCA8O94911 1581 aa27.86■■■□□ 2.05
SMG9-204ENST00000596714 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
SMG9-204ENST00000596714 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
SMG9-204ENST00000596714 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
SMG9-204ENST00000596714 KDM5BQ9UGL1 1544 aa27.78■■■□□ 2.04
SMG9-204ENST00000596714 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
SMG9-204ENST00000596714 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
SMG9-204ENST00000596714 ZCCHC11Q5TAX3 1644 aaKnown RBP27.74■■■□□ 2.03
SMG9-204ENST00000596714 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
SMG9-204ENST00000596714 ASXL2Q76L83 1435 aa27.67■■■□□ 2.02
SMG9-204ENST00000596714 ARID3CA6NKF2 412 aa27.66■■■□□ 2.02
SMG9-204ENST00000596714 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
SMG9-204ENST00000596714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
SMG9-204ENST00000596714 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
SMG9-204ENST00000596714 HECW1Q76N89 1606 aa27.65■■■□□ 2.02
SMG9-204ENST00000596714 ATP10BO94823 1461 aa27.63■■■□□ 2.01
SMG9-204ENST00000596714 ABCC10Q5T3U5 1492 aa27.6■■■□□ 2.01
SMG9-204ENST00000596714 CASKIN1Q8WXD9 1431 aa27.59■■■□□ 2.01
SMG9-204ENST00000596714 WDR7Q9Y4E6 1490 aa27.58■■■□□ 2.01
SMG9-204ENST00000596714 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
SMG9-204ENST00000596714 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
SMG9-204ENST00000596714 FAM69CQ0P6D2 419 aa27.56■■■□□ 2
SMG9-204ENST00000596714 DIP2BQ9P265 1576 aa27.55■■■□□ 2
SMG9-204ENST00000596714 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
SMG9-204ENST00000596714 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
SMG9-204ENST00000596714 PLEKHD1A6NEE1 506 aa27.51■■□□□ 1.99
SMG9-204ENST00000596714 CDK11AQ9UQ88 783 aaPredicted RBP27.51■■□□□ 1.99
SMG9-204ENST00000596714 CCDC18Q5T9S5 1454 aa27.51■■□□□ 1.99
SMG9-204ENST00000596714 CDK13Q14004 1512 aaKnown RBP27.5■■□□□ 1.99
SMG9-204ENST00000596714 KCNH8Q96L42 1107 aa27.47■■□□□ 1.99
SMG9-204ENST00000596714 GLI2P10070 1586 aa27.47■■□□□ 1.99
SMG9-204ENST00000596714 VPS8Q8N3P4 1428 aa27.46■■□□□ 1.99
SMG9-204ENST00000596714 LRRIQ1Q96JM4 1722 aa27.4■■□□□ 1.98
SMG9-204ENST00000596714 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
SMG9-204ENST00000596714 CFAP43Q8NDM7 1665 aa27.33■■□□□ 1.97
SMG9-204ENST00000596714 TROQ12816 1431 aaPredicted RBP27.33■■□□□ 1.96
SMG9-204ENST00000596714 TSPOAP1O95153 1857 aa27.32■■□□□ 1.96
SMG9-204ENST00000596714 CD109Q6YHK3 1445 aa27.31■■□□□ 1.96
SMG9-204ENST00000596714 ABCA9Q8IUA7 1624 aa27.3■■□□□ 1.96
SMG9-204ENST00000596714 TEX14Q8IWB6 1497 aa27.28■■□□□ 1.96
SMG9-204ENST00000596714 KIF14Q15058 1648 aa27.27■■□□□ 1.96
SMG9-204ENST00000596714 APLP2Q06481 763 aa27.26■■□□□ 1.95
SMG9-204ENST00000596714 MTUS2Q5JR59 1369 aa27.25■■□□□ 1.95
SMG9-204ENST00000596714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.23■■□□□ 1.95
SMG9-204ENST00000596714 MAGI3Q5TCQ9 1506 aa27.22■■□□□ 1.95
SMG9-204ENST00000596714 TIAM1Q13009 1591 aa27.21■■□□□ 1.95
SMG9-204ENST00000596714 PPRC1Q5VV67 1664 aaKnown RBP27.2■■□□□ 1.94
SMG9-204ENST00000596714 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
SMG9-204ENST00000596714 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
SMG9-204ENST00000596714 EHBP1L1Q8N3D4 1523 aa27.18■■□□□ 1.94
SMG9-204ENST00000596714 MYO5CQ9NQX4 1742 aa27.11■■□□□ 1.93
SMG9-204ENST00000596714 PHLDB1Q86UU1 1377 aa27.1■■□□□ 1.93
SMG9-204ENST00000596714 PLCH2O75038 1416 aa27.09■■□□□ 1.93
SMG9-204ENST00000596714 LRRC9Q6ZRR7 1453 aa27.09■■□□□ 1.93
SMG9-204ENST00000596714 CFAP74Q9C0B2 1584 aa27.09■■□□□ 1.93
SMG9-204ENST00000596714 NEO1Q92859 1461 aa27.08■■□□□ 1.93
SMG9-204ENST00000596714 KDM6BO15054 1643 aa27.08■■□□□ 1.93
SMG9-204ENST00000596714 ARAP3Q8WWN8 1544 aa27.07■■□□□ 1.92
SMG9-204ENST00000596714 FANCAO15360 1455 aa27.06■■□□□ 1.92
SMG9-204ENST00000596714 SUPT6HQ7KZ85 1726 aaKnown RBP27.05■■□□□ 1.92
SMG9-204ENST00000596714 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
SMG9-204ENST00000596714 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
SMG9-204ENST00000596714 ARHGAP5Q13017 1502 aa27.04■■□□□ 1.92
SMG9-204ENST00000596714 PREX2Q70Z35 1606 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms