RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 RIMBP3CA6NJZ7 1639 aa33.24■■■□□ 2.91
CCDC61-205ENST00000596161 RIMBP3BA6NNM3 1639 aa33.24■■■□□ 2.91
CCDC61-205ENST00000596161 RIMBP3Q9UFD9 1639 aa33.24■■■□□ 2.91
CCDC61-205ENST00000596161 SHROOM2Q13796 1616 aa33.2■■■□□ 2.9
CCDC61-205ENST00000596161 JPH4Q96JJ6 628 aa33.15■■■□□ 2.9
CCDC61-205ENST00000596161 IQGAP2Q13576 1575 aa33.11■■■□□ 2.89
CCDC61-205ENST00000596161 KIF21BO75037 1637 aa33.1■■■□□ 2.89
CCDC61-205ENST00000596161 PRG4Q92954 1404 aaPredicted RBP33.07■■■□□ 2.88
CCDC61-205ENST00000596161 CTTNBP2Q8WZ74 1663 aa33.07■■■□□ 2.88
CCDC61-205ENST00000596161 ARAP1Q96P48 1450 aa33.03■■■□□ 2.88
CCDC61-205ENST00000596161 ERCC6L2Q5T890 1561 aa33■■■□□ 2.87
CCDC61-205ENST00000596161 CYB5RLQ6IPT4 315 aa32.95■■■□□ 2.87
CCDC61-205ENST00000596161 GOLGA3Q08378 1498 aa32.94■■■□□ 2.86
CCDC61-205ENST00000596161 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
CCDC61-205ENST00000596161 UGGT2Q9NYU1 1516 aa32.93■■■□□ 2.86
CCDC61-205ENST00000596161 DISP1Q96F81 1524 aa32.82■■■□□ 2.85
CCDC61-205ENST00000596161 UBTFP17480 764 aaKnown RBP32.81■■■□□ 2.84
CCDC61-205ENST00000596161 EHMT2Q96KQ7 1210 aa32.8■■■□□ 2.84
CCDC61-205ENST00000596161 TNIKQ9UKE5 1360 aa32.78■■■□□ 2.84
CCDC61-205ENST00000596161 KIAA0556O60303 1618 aa32.77■■■□□ 2.84
CCDC61-205ENST00000596161 PTPRGP23470 1445 aa32.72■■■□□ 2.83
CCDC61-205ENST00000596161 SAMD9Q5K651 1589 aa32.65■■■□□ 2.82
CCDC61-205ENST00000596161 TTBK1Q5TCY1 1321 aaPredicted RBP32.63■■■□□ 2.81
CCDC61-205ENST00000596161 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
CCDC61-205ENST00000596161 EFCAB5A4FU69 1503 aa32.6■■■□□ 2.81
CCDC61-205ENST00000596161 P3H3Q8IVL6 736 aa32.55■■■□□ 2.8
CCDC61-205ENST00000596161 UACAQ9BZF9 1416 aa32.51■■■□□ 2.8
CCDC61-205ENST00000596161 ADCY10Q96PN6 1610 aa32.51■■■□□ 2.79
CCDC61-205ENST00000596161 UHRF1BP1LA0JNW5 1464 aa32.48■■■□□ 2.79
CCDC61-205ENST00000596161 NPM1P06748 294 aaKnown RBP eCLIP32.46■■■□□ 2.79
CCDC61-205ENST00000596161 FHOD3Q2V2M9 1422 aa32.45■■■□□ 2.79
CCDC61-205ENST00000596161 ABCC2Q92887 1545 aa32.45■■■□□ 2.78
CCDC61-205ENST00000596161 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
CCDC61-205ENST00000596161 PLB1Q6P1J6 1458 aa32.41■■■□□ 2.78
CCDC61-205ENST00000596161 ABCA8O94911 1581 aa32.41■■■□□ 2.78
CCDC61-205ENST00000596161 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
CCDC61-205ENST00000596161 CLIP1P30622 1438 aa32.34■■■□□ 2.77
CCDC61-205ENST00000596161 KDM5BQ9UGL1 1544 aa32.31■■■□□ 2.76
CCDC61-205ENST00000596161 RAPGEF6Q8TEU7 1601 aa32.29■■■□□ 2.76
CCDC61-205ENST00000596161 FMN1Q68DA7 1419 aa32.29■■■□□ 2.76
CCDC61-205ENST00000596161 MAPKBP1O60336 1514 aa32.29■■■□□ 2.76
CCDC61-205ENST00000596161 CEP162Q5TB80 1403 aa32.25■■■□□ 2.75
CCDC61-205ENST00000596161 ZCCHC11Q5TAX3 1644 aaKnown RBP32.23■■■□□ 2.75
CCDC61-205ENST00000596161 TRHP20396 242 aaPredicted RBP32.22■■■□□ 2.75
CCDC61-205ENST00000596161 NUP153P49790 1475 aaKnown RBP32.16■■■□□ 2.74
CCDC61-205ENST00000596161 ASXL2Q76L83 1435 aa32.15■■■□□ 2.74
CCDC61-205ENST00000596161 ATP10BO94823 1461 aa32.12■■■□□ 2.73
CCDC61-205ENST00000596161 HECW1Q76N89 1606 aa32.11■■■□□ 2.73
CCDC61-205ENST00000596161 ABCC10Q5T3U5 1492 aa32.1■■■□□ 2.73
CCDC61-205ENST00000596161 ARID3CA6NKF2 412 aa32.09■■■□□ 2.73
CCDC61-205ENST00000596161 WDR7Q9Y4E6 1490 aa32.05■■■□□ 2.72
CCDC61-205ENST00000596161 ATP1B4Q9UN42 357 aaPredicted RBP32.05■■■□□ 2.72
CCDC61-205ENST00000596161 DIP2BQ9P265 1576 aa32.05■■■□□ 2.72
CCDC61-205ENST00000596161 CASKIN1Q8WXD9 1431 aa32.04■■■□□ 2.72
CCDC61-205ENST00000596161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.04■■■□□ 2.72
CCDC61-205ENST00000596161 HNRNPUL2Q1KMD3 747 aaKnown RBP32.04■■■□□ 2.72
CCDC61-205ENST00000596161 PCF11O94913 1555 aaKnown RBP32.02■■■□□ 2.72
CCDC61-205ENST00000596161 FAM69CQ0P6D2 419 aa32.01■■■□□ 2.71
CCDC61-205ENST00000596161 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
CCDC61-205ENST00000596161 FYCO1Q9BQS8 1478 aa32■■■□□ 2.71
CCDC61-205ENST00000596161 EPRSP07814 1512 aaKnown RBP31.98■■■□□ 2.71
CCDC61-205ENST00000596161 CDK13Q14004 1512 aaKnown RBP31.95■■■□□ 2.71
CCDC61-205ENST00000596161 GLI2P10070 1586 aa31.94■■■□□ 2.7
CCDC61-205ENST00000596161 CCDC18Q5T9S5 1454 aa31.92■■■□□ 2.7
CCDC61-205ENST00000596161 PLEKHD1A6NEE1 506 aa31.92■■■□□ 2.7
CCDC61-205ENST00000596161 KCNH8Q96L42 1107 aa31.88■■■□□ 2.69
CCDC61-205ENST00000596161 CDK11AQ9UQ88 783 aaPredicted RBP31.88■■■□□ 2.69
CCDC61-205ENST00000596161 VPS8Q8N3P4 1428 aa31.86■■■□□ 2.69
CCDC61-205ENST00000596161 LRRIQ1Q96JM4 1722 aa31.85■■■□□ 2.69
CCDC61-205ENST00000596161 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
CCDC61-205ENST00000596161 CFAP43Q8NDM7 1665 aa31.76■■■□□ 2.68
CCDC61-205ENST00000596161 TROQ12816 1431 aaPredicted RBP31.75■■■□□ 2.67
CCDC61-205ENST00000596161 ABCA9Q8IUA7 1624 aa31.74■■■□□ 2.67
CCDC61-205ENST00000596161 CD109Q6YHK3 1445 aa31.73■■■□□ 2.67
CCDC61-205ENST00000596161 TSPOAP1O95153 1857 aa31.72■■■□□ 2.67
CCDC61-205ENST00000596161 TEX14Q8IWB6 1497 aa31.68■■■□□ 2.66
CCDC61-205ENST00000596161 KIF14Q15058 1648 aa31.66■■■□□ 2.66
CCDC61-205ENST00000596161 PPRC1Q5VV67 1664 aaKnown RBP31.66■■■□□ 2.66
CCDC61-205ENST00000596161 MAGI3Q5TCQ9 1506 aa31.65■■■□□ 2.66
CCDC61-205ENST00000596161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.64■■■□□ 2.66
CCDC61-205ENST00000596161 MTUS2Q5JR59 1369 aa31.61■■■□□ 2.65
CCDC61-205ENST00000596161 TIAM1Q13009 1591 aa31.6■■■□□ 2.65
CCDC61-205ENST00000596161 TTC37Q6PGP7 1564 aa31.59■■■□□ 2.65
CCDC61-205ENST00000596161 MAP3K1Q13233 1512 aa31.57■■■□□ 2.64
CCDC61-205ENST00000596161 EHBP1L1Q8N3D4 1523 aa31.56■■■□□ 2.64
CCDC61-205ENST00000596161 APLP2Q06481 763 aa31.54■■■□□ 2.64
CCDC61-205ENST00000596161 KDM6BO15054 1643 aa31.49■■■□□ 2.63
CCDC61-205ENST00000596161 PHLDB1Q86UU1 1377 aa31.48■■■□□ 2.63
CCDC61-205ENST00000596161 MYO5CQ9NQX4 1742 aa31.48■■■□□ 2.63
CCDC61-205ENST00000596161 PLCH2O75038 1416 aa31.48■■■□□ 2.63
CCDC61-205ENST00000596161 NEO1Q92859 1461 aa31.47■■■□□ 2.63
CCDC61-205ENST00000596161 ARAP3Q8WWN8 1544 aa31.46■■■□□ 2.63
CCDC61-205ENST00000596161 CFAP74Q9C0B2 1584 aa31.46■■■□□ 2.63
CCDC61-205ENST00000596161 LRRC9Q6ZRR7 1453 aa31.45■■■□□ 2.62
CCDC61-205ENST00000596161 FANCAO15360 1455 aa31.43■■■□□ 2.62
CCDC61-205ENST00000596161 SUPT6HQ7KZ85 1726 aaKnown RBP31.39■■■□□ 2.62
CCDC61-205ENST00000596161 EFCAB2Q5VUJ9 269 aa31.39■■■□□ 2.62
CCDC61-205ENST00000596161 ARHGAP5Q13017 1502 aa31.38■■■□□ 2.61
CCDC61-205ENST00000596161 PREX2Q70Z35 1606 aa31.38■■■□□ 2.61
CCDC61-205ENST00000596161 CCNB3Q8WWL7 1395 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 308.6 ms