RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 RIMBP3BA6NNM3 1639 aa38.11■■■■□ 3.69
PNKP-205ENST00000595081 RIMBP3Q9UFD9 1639 aa38.11■■■■□ 3.69
PNKP-205ENST00000595081 KIAA0586Q9BVV6 1533 aa38.04■■■■□ 3.68
PNKP-205ENST00000595081 SHROOM2Q13796 1616 aa38■■■■□ 3.67
PNKP-205ENST00000595081 JPH4Q96JJ6 628 aa37.96■■■■□ 3.67
PNKP-205ENST00000595081 ERCC6L2Q5T890 1561 aa37.93■■■■□ 3.66
PNKP-205ENST00000595081 PRG4Q92954 1404 aaPredicted RBP37.88■■■■□ 3.66
PNKP-205ENST00000595081 ARAP1Q96P48 1450 aa37.88■■■■□ 3.65
PNKP-205ENST00000595081 IQGAP2Q13576 1575 aa37.88■■■■□ 3.65
PNKP-205ENST00000595081 KIF21BO75037 1637 aa37.84■■■■□ 3.65
PNKP-205ENST00000595081 CTTNBP2Q8WZ74 1663 aa37.8■■■■□ 3.64
PNKP-205ENST00000595081 CYB5RLQ6IPT4 315 aa37.8■■■■□ 3.64
PNKP-205ENST00000595081 EHMT2Q96KQ7 1210 aa37.76■■■■□ 3.64
PNKP-205ENST00000595081 UGGT2Q9NYU1 1516 aa37.68■■■■□ 3.62
PNKP-205ENST00000595081 GOLGA3Q08378 1498 aa37.66■■■■□ 3.62
PNKP-205ENST00000595081 CARMIL2Q6F5E8 1435 aa37.61■■■■□ 3.61
PNKP-205ENST00000595081 DISP1Q96F81 1524 aa37.61■■■■□ 3.61
PNKP-205ENST00000595081 UBTFP17480 764 aaKnown RBP37.57■■■■□ 3.6
PNKP-205ENST00000595081 KIAA0556O60303 1618 aa37.52■■■■□ 3.6
PNKP-205ENST00000595081 TTBK1Q5TCY1 1321 aaPredicted RBP37.5■■■■□ 3.59
PNKP-205ENST00000595081 TNIKQ9UKE5 1360 aa37.49■■■■□ 3.59
PNKP-205ENST00000595081 RANGAP1P46060 587 aaPredicted RBP37.47■■■■□ 3.59
PNKP-205ENST00000595081 PTPRGP23470 1445 aa37.45■■■■□ 3.59
PNKP-205ENST00000595081 P3H3Q8IVL6 736 aa37.37■■■■□ 3.57
PNKP-205ENST00000595081 SAMD9Q5K651 1589 aa37.36■■■■□ 3.57
PNKP-205ENST00000595081 ADCY10Q96PN6 1610 aa37.26■■■■□ 3.56
PNKP-205ENST00000595081 EFCAB5A4FU69 1503 aa37.23■■■■□ 3.55
PNKP-205ENST00000595081 FHOD3Q2V2M9 1422 aa37.21■■■■□ 3.55
PNKP-205ENST00000595081 UACAQ9BZF9 1416 aa37.2■■■■□ 3.55
PNKP-205ENST00000595081 LOC105371045A0A1W2PR82 267 aa37.18■■■■□ 3.54
PNKP-205ENST00000595081 PLB1Q6P1J6 1458 aa37.16■■■■□ 3.54
PNKP-205ENST00000595081 ARHGAP35Q9NRY4 1499 aa37.14■■■■□ 3.54
PNKP-205ENST00000595081 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.54
PNKP-205ENST00000595081 ABCC2Q92887 1545 aa37.13■■■■□ 3.53
PNKP-205ENST00000595081 ABCA8O94911 1581 aa37.09■■■■□ 3.53
PNKP-205ENST00000595081 NPM1P06748 294 aaKnown RBP eCLIP37.08■■■■□ 3.53
PNKP-205ENST00000595081 CLIP1P30622 1438 aa37.02■■■■□ 3.52
PNKP-205ENST00000595081 KDM5BQ9UGL1 1544 aa36.97■■■■□ 3.51
PNKP-205ENST00000595081 RAPGEF6Q8TEU7 1601 aa36.95■■■■□ 3.51
PNKP-205ENST00000595081 TRHP20396 242 aaPredicted RBP36.93■■■■□ 3.5
PNKP-205ENST00000595081 MAPKBP1O60336 1514 aa36.93■■■■□ 3.5
PNKP-205ENST00000595081 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
PNKP-205ENST00000595081 ZCCHC11Q5TAX3 1644 aaKnown RBP36.91■■■■□ 3.5
PNKP-205ENST00000595081 ARID3CA6NKF2 412 aa36.9■■■■□ 3.5
PNKP-205ENST00000595081 FMN1Q68DA7 1419 aa36.89■■■■□ 3.5
PNKP-205ENST00000595081 NUP153P49790 1475 aaKnown RBP36.84■■■■□ 3.49
PNKP-205ENST00000595081 ASXL2Q76L83 1435 aa36.83■■■■□ 3.49
PNKP-205ENST00000595081 ATP10BO94823 1461 aa36.81■■■■□ 3.48
PNKP-205ENST00000595081 ATP1B4Q9UN42 357 aaPredicted RBP36.74■■■■□ 3.47
PNKP-205ENST00000595081 ABCC10Q5T3U5 1492 aa36.74■■■■□ 3.47
PNKP-205ENST00000595081 DIP2BQ9P265 1576 aa36.7■■■■□ 3.46
PNKP-205ENST00000595081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.69■■■■□ 3.46
PNKP-205ENST00000595081 HNRNPUL2Q1KMD3 747 aaKnown RBP36.69■■■■□ 3.46
PNKP-205ENST00000595081 HECW1Q76N89 1606 aa36.69■■■■□ 3.46
PNKP-205ENST00000595081 FAM69CQ0P6D2 419 aa36.68■■■■□ 3.46
PNKP-205ENST00000595081 PCF11O94913 1555 aaKnown RBP36.68■■■■□ 3.46
PNKP-205ENST00000595081 KIF13AQ9H1H9 1805 aa36.68■■■■□ 3.46
PNKP-205ENST00000595081 WDR7Q9Y4E6 1490 aa36.68■■■■□ 3.46
PNKP-205ENST00000595081 CASKIN1Q8WXD9 1431 aa36.66■■■■□ 3.46
PNKP-205ENST00000595081 CDK13Q14004 1512 aaKnown RBP36.64■■■■□ 3.46
PNKP-205ENST00000595081 EPRSP07814 1512 aaKnown RBP36.61■■■■□ 3.45
PNKP-205ENST00000595081 FYCO1Q9BQS8 1478 aa36.57■■■■□ 3.45
PNKP-205ENST00000595081 KCNH8Q96L42 1107 aa36.56■■■■□ 3.44
PNKP-205ENST00000595081 LRRIQ1Q96JM4 1722 aa36.54■■■■□ 3.44
PNKP-205ENST00000595081 GLI2P10070 1586 aa36.53■■■■□ 3.44
PNKP-205ENST00000595081 PLEKHD1A6NEE1 506 aa36.49■■■■□ 3.43
PNKP-205ENST00000595081 CCDC18Q5T9S5 1454 aa36.46■■■■□ 3.43
PNKP-205ENST00000595081 VPS8Q8N3P4 1428 aa36.44■■■■□ 3.42
PNKP-205ENST00000595081 MAP3K4Q9Y6R4 1608 aa36.39■■■■□ 3.42
PNKP-205ENST00000595081 TSPOAP1O95153 1857 aa36.39■■■■□ 3.42
PNKP-205ENST00000595081 CDK11AQ9UQ88 783 aaPredicted RBP36.38■■■■□ 3.41
PNKP-205ENST00000595081 CFAP43Q8NDM7 1665 aa36.31■■■■□ 3.4
PNKP-205ENST00000595081 TROQ12816 1431 aaPredicted RBP36.31■■■■□ 3.4
PNKP-205ENST00000595081 CD109Q6YHK3 1445 aa36.31■■■■□ 3.4
PNKP-205ENST00000595081 ABCA9Q8IUA7 1624 aa36.3■■■■□ 3.4
PNKP-205ENST00000595081 PPRC1Q5VV67 1664 aaKnown RBP36.29■■■■□ 3.4
PNKP-205ENST00000595081 MAGI3Q5TCQ9 1506 aa36.29■■■■□ 3.4
PNKP-205ENST00000595081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.24■■■■□ 3.39
PNKP-205ENST00000595081 KIF14Q15058 1648 aa36.23■■■■□ 3.39
PNKP-205ENST00000595081 TTC37Q6PGP7 1564 aa36.21■■■■□ 3.39
PNKP-205ENST00000595081 TEX14Q8IWB6 1497 aa36.18■■■■□ 3.38
PNKP-205ENST00000595081 TIAM1Q13009 1591 aa36.15■■■■□ 3.38
PNKP-205ENST00000595081 MTUS2Q5JR59 1369 aa36.14■■■■□ 3.38
PNKP-205ENST00000595081 EHBP1L1Q8N3D4 1523 aa36.07■■■■□ 3.36
PNKP-205ENST00000595081 MAP3K1Q13233 1512 aa36.04■■■■□ 3.36
PNKP-205ENST00000595081 KDM6BO15054 1643 aa36.03■■■■□ 3.36
PNKP-205ENST00000595081 PLCH2O75038 1416 aa36.02■■■■□ 3.36
PNKP-205ENST00000595081 MYO5CQ9NQX4 1742 aa36■■■■□ 3.35
PNKP-205ENST00000595081 LRRC9Q6ZRR7 1453 aa35.99■■■■□ 3.35
PNKP-205ENST00000595081 APLP2Q06481 763 aa35.99■■■■□ 3.35
PNKP-205ENST00000595081 KANK4Q5T7N3 995 aaPredicted RBP35.99■■■■□ 3.35
PNKP-205ENST00000595081 COL17A1Q9UMD9 1497 aaPredicted RBP35.99■■■■□ 3.35
PNKP-205ENST00000595081 FANCAO15360 1455 aa35.98■■■■□ 3.35
PNKP-205ENST00000595081 NEO1Q92859 1461 aa35.97■■■■□ 3.35
PNKP-205ENST00000595081 ARAP3Q8WWN8 1544 aa35.92■■■■□ 3.34
PNKP-205ENST00000595081 ARHGAP5Q13017 1502 aa35.91■■■■□ 3.34
PNKP-205ENST00000595081 PHLDB1Q86UU1 1377 aa35.9■■■■□ 3.34
PNKP-205ENST00000595081 AKNAQ7Z591 1439 aa35.9■■■■□ 3.34
PNKP-205ENST00000595081 PREX2Q70Z35 1606 aa35.9■■■■□ 3.34
PNKP-205ENST00000595081 CFAP74Q9C0B2 1584 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms