RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.99■□□□□ 0.956e-7■■■□□ 16.6
SYMPK-202ENST00000593504 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
SYMPK-202ENST00000593504 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
SYMPK-202ENST00000593504 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
SYMPK-202ENST00000593504 HIRIP3Q9BW71 556 aaPredicted RBP20.96■□□□□ 0.95
SYMPK-202ENST00000593504 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
SYMPK-202ENST00000593504 DAXXQ9UER7 740 aaPredicted RBP20.91■□□□□ 0.94
SYMPK-202ENST00000593504 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
SYMPK-202ENST00000593504 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
SYMPK-202ENST00000593504 KDM2AQ9Y2K7 1162 aa20.87■□□□□ 0.93
SYMPK-202ENST00000593504 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
SYMPK-202ENST00000593504 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
SYMPK-202ENST00000593504 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
SYMPK-202ENST00000593504 NCAPD3P42695 1498 aa20.83■□□□□ 0.93
SYMPK-202ENST00000593504 HNRNPUQ00839 825 aaKnown RBP eCLIP20.83■□□□□ 0.93
SYMPK-202ENST00000593504 EIF4G2P78344 907 aaKnown RBP eCLIP20.83■□□□□ 0.922e-7■■■■■ 34.2
SYMPK-202ENST00000593504 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
SYMPK-202ENST00000593504 FAM9BQ8IZU0 186 aa20.8■□□□□ 0.92
SYMPK-202ENST00000593504 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
SYMPK-202ENST00000593504 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
SYMPK-202ENST00000593504 FKBP8Q14318 412 aa20.75■□□□□ 0.91
SYMPK-202ENST00000593504 FHOD3Q2V2M9 1422 aa20.75■□□□□ 0.91
SYMPK-202ENST00000593504 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
SYMPK-202ENST00000593504 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
SYMPK-202ENST00000593504 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
SYMPK-202ENST00000593504 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
SYMPK-202ENST00000593504 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
SYMPK-202ENST00000593504 TMC1Q8TDI8 760 aa20.67■□□□□ 0.9
SYMPK-202ENST00000593504 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
SYMPK-202ENST00000593504 IGF1RP08069 1367 aa20.65■□□□□ 0.9
SYMPK-202ENST00000593504 RGL3Q3MIN7 710 aa20.65■□□□□ 0.9
SYMPK-202ENST00000593504 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
SYMPK-202ENST00000593504 CARMIL2Q6F5E8 1435 aa20.63■□□□□ 0.89
SYMPK-202ENST00000593504 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
SYMPK-202ENST00000593504 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
SYMPK-202ENST00000593504 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
SYMPK-202ENST00000593504 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
SYMPK-202ENST00000593504 SALL2Q9Y467 1007 aaPredicted RBP20.58■□□□□ 0.89
SYMPK-202ENST00000593504 NEFMP07197 916 aa20.58■□□□□ 0.88
SYMPK-202ENST00000593504 CFTRP13569 1480 aa20.58■□□□□ 0.88
SYMPK-202ENST00000593504 RTL5Q5HYW3 569 aaPredicted RBP20.54■□□□□ 0.88
SYMPK-202ENST00000593504 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
SYMPK-202ENST00000593504 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
SYMPK-202ENST00000593504 KIF21BO75037 1637 aa20.53■□□□□ 0.88
SYMPK-202ENST00000593504 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
SYMPK-202ENST00000593504 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
SYMPK-202ENST00000593504 FOXD1Q16676 465 aa20.47■□□□□ 0.87
SYMPK-202ENST00000593504 TOP2BQ02880 1626 aa20.46■□□□□ 0.87
SYMPK-202ENST00000593504 WDR43Q15061 677 aaKnown RBP eCLIP20.46■□□□□ 0.873e-6■■■■□ 24.6
SYMPK-202ENST00000593504 JPH4Q96JJ6 628 aa20.44■□□□□ 0.86
SYMPK-202ENST00000593504 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
SYMPK-202ENST00000593504 MPHOSPH9Q99550 1183 aa20.43■□□□□ 0.86
SYMPK-202ENST00000593504 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
SYMPK-202ENST00000593504 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
SYMPK-202ENST00000593504 CCDC18Q5T9S5 1454 aa20.43■□□□□ 0.86
SYMPK-202ENST00000593504 CUX1P39880 1505 aa20.41■□□□□ 0.86
SYMPK-202ENST00000593504 PKD2Q13563 968 aa20.41■□□□□ 0.86
SYMPK-202ENST00000593504 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
SYMPK-202ENST00000593504 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
SYMPK-202ENST00000593504 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
SYMPK-202ENST00000593504 NESP48681 1621 aa20.39■□□□□ 0.86
SYMPK-202ENST00000593504 SLC24A1O60721 1099 aa20.38■□□□□ 0.85
SYMPK-202ENST00000593504 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
SYMPK-202ENST00000593504 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
SYMPK-202ENST00000593504 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
SYMPK-202ENST00000593504 ANKRD30AQ9BXX3 1397 aa20.37■□□□□ 0.85
SYMPK-202ENST00000593504 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
SYMPK-202ENST00000593504 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
SYMPK-202ENST00000593504 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
SYMPK-202ENST00000593504 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
SYMPK-202ENST00000593504 CDCA8Q53HL2 280 aa20.34■□□□□ 0.85
SYMPK-202ENST00000593504 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.846e-7■■■■■ 33.3
SYMPK-202ENST00000593504 ANP32AP39687 249 aaKnown RBP20.32■□□□□ 0.84
SYMPK-202ENST00000593504 NUP155O75694 1391 aa20.32■□□□□ 0.84
SYMPK-202ENST00000593504 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
SYMPK-202ENST00000593504 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
SYMPK-202ENST00000593504 KNSTRNQ9Y448 316 aa20.3■□□□□ 0.84
SYMPK-202ENST00000593504 HNRNPMP52272 730 aaKnown RBP eCLIP20.3■□□□□ 0.84
SYMPK-202ENST00000593504 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
SYMPK-202ENST00000593504 KANK1Q14678 1352 aa20.29■□□□□ 0.84
SYMPK-202ENST00000593504 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
SYMPK-202ENST00000593504 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
SYMPK-202ENST00000593504 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
SYMPK-202ENST00000593504 LRRC9Q6ZRR7 1453 aa20.27■□□□□ 0.84
SYMPK-202ENST00000593504 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
SYMPK-202ENST00000593504 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
SYMPK-202ENST00000593504 CCER2I3L3R5 266 aa20.26■□□□□ 0.83
SYMPK-202ENST00000593504 L3MBTL2Q969R5 705 aa20.25■□□□□ 0.83
SYMPK-202ENST00000593504 SUPT16HQ9Y5B9 1047 aaKnown RBP20.25■□□□□ 0.83
SYMPK-202ENST00000593504 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
SYMPK-202ENST00000593504 CASKIN1Q8WXD9 1431 aa20.23■□□□□ 0.83
SYMPK-202ENST00000593504 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
SYMPK-202ENST00000593504 PTPRGP23470 1445 aa20.21■□□□□ 0.83
SYMPK-202ENST00000593504 TMF1P82094 1093 aa20.2■□□□□ 0.82
SYMPK-202ENST00000593504 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
SYMPK-202ENST00000593504 RSPH4AQ5TD94 716 aa20.19■□□□□ 0.82
SYMPK-202ENST00000593504 MYOM3Q5VTT5 1437 aa20.18■□□□□ 0.82
SYMPK-202ENST00000593504 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
SYMPK-202ENST00000593504 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
SYMPK-202ENST00000593504 DNMBPQ6XZF7 1577 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms