RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
CIRBP-228ENST00000590347 HNRNPUQ00839 825 aaKnown RBP eCLIP21.21■□□□□ 0.99
CIRBP-228ENST00000590347 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
CIRBP-228ENST00000590347 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
CIRBP-228ENST00000590347 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
CIRBP-228ENST00000590347 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
CIRBP-228ENST00000590347 CEP164Q9UPV0 1460 aa21.16■□□□□ 0.98
CIRBP-228ENST00000590347 CFTRP13569 1480 aa21.14■□□□□ 0.98
CIRBP-228ENST00000590347 ANP32CO43423 234 aa21.14■□□□□ 0.98
CIRBP-228ENST00000590347 CUX1P39880 1505 aa21.14■□□□□ 0.98
CIRBP-228ENST00000590347 CLIP1P30622 1438 aa21.14■□□□□ 0.97
CIRBP-228ENST00000590347 RTL5Q5HYW3 569 aaPredicted RBP21.14■□□□□ 0.97
CIRBP-228ENST00000590347 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
CIRBP-228ENST00000590347 CADPSQ9ULU8 1353 aa21.11■□□□□ 0.97
CIRBP-228ENST00000590347 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
CIRBP-228ENST00000590347 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
CIRBP-228ENST00000590347 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.97
CIRBP-228ENST00000590347 NESP48681 1621 aa21.06■□□□□ 0.96
CIRBP-228ENST00000590347 PPP1R15AO75807 674 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-228ENST00000590347 UBE2Q2Q8WVN8 375 aa21.02■□□□□ 0.96
CIRBP-228ENST00000590347 LAS1LQ9Y4W2 734 aaKnown RBP21.02■□□□□ 0.95
CIRBP-228ENST00000590347 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
CIRBP-228ENST00000590347 KIF27Q86VH2 1401 aa20.99■□□□□ 0.95
CIRBP-228ENST00000590347 ERICH6BQ5W0A0 696 aa20.98■□□□□ 0.95
CIRBP-228ENST00000590347 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
CIRBP-228ENST00000590347 CUX2O14529 1486 aa20.98■□□□□ 0.95
CIRBP-228ENST00000590347 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
CIRBP-228ENST00000590347 PPP4R2Q9NY27 417 aa20.95■□□□□ 0.95
CIRBP-228ENST00000590347 KIF21BO75037 1637 aa20.95■□□□□ 0.94
CIRBP-228ENST00000590347 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
CIRBP-228ENST00000590347 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
CIRBP-228ENST00000590347 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
CIRBP-228ENST00000590347 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
CIRBP-228ENST00000590347 ZBTB47Q9UFB7 747 aaPredicted RBP20.92■□□□□ 0.94
CIRBP-228ENST00000590347 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
CIRBP-228ENST00000590347 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
CIRBP-228ENST00000590347 CCER2I3L3R5 266 aa20.89■□□□□ 0.94
CIRBP-228ENST00000590347 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
CIRBP-228ENST00000590347 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
CIRBP-228ENST00000590347 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
CIRBP-228ENST00000590347 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
CIRBP-228ENST00000590347 ANP32AP39687 249 aaKnown RBP20.87■□□□□ 0.93
CIRBP-228ENST00000590347 FAM9BQ8IZU0 186 aa20.87■□□□□ 0.93
CIRBP-228ENST00000590347 CCDC184Q52MB2 194 aa20.86■□□□□ 0.93
CIRBP-228ENST00000590347 IGF1RP08069 1367 aa20.86■□□□□ 0.93
CIRBP-228ENST00000590347 NEFMP07197 916 aa20.84■□□□□ 0.93
CIRBP-228ENST00000590347 IPO9Q96P70 1041 aaKnown RBP20.83■□□□□ 0.92
CIRBP-228ENST00000590347 RAB3GAP2Q9H2M9 1393 aa20.81■□□□□ 0.92
CIRBP-228ENST00000590347 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
CIRBP-228ENST00000590347 ARAP1Q96P48 1450 aa20.77■□□□□ 0.92
CIRBP-228ENST00000590347 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
CIRBP-228ENST00000590347 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
CIRBP-228ENST00000590347 PKNOX2Q96KN3 472 aa20.71■□□□□ 0.91
CIRBP-228ENST00000590347 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
CIRBP-228ENST00000590347 ERICH3Q5RHP9 1530 aa20.68■□□□□ 0.9
CIRBP-228ENST00000590347 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
CIRBP-228ENST00000590347 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
CIRBP-228ENST00000590347 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
CIRBP-228ENST00000590347 ARHGAP35Q9NRY4 1499 aa20.66■□□□□ 0.9
CIRBP-228ENST00000590347 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
CIRBP-228ENST00000590347 WASHC2AQ641Q2 1341 aa20.6■□□□□ 0.89
CIRBP-228ENST00000590347 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
CIRBP-228ENST00000590347 MRS2Q9HD23 443 aa20.59■□□□□ 0.89
CIRBP-228ENST00000590347 AKNAQ7Z591 1439 aa20.58■□□□□ 0.89
CIRBP-228ENST00000590347 SKAP1Q86WV1 359 aa20.57■□□□□ 0.88
CIRBP-228ENST00000590347 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
CIRBP-228ENST00000590347 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
CIRBP-228ENST00000590347 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
CIRBP-228ENST00000590347 PDS5BQ9NTI5 1447 aa20.54■□□□□ 0.88
CIRBP-228ENST00000590347 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
CIRBP-228ENST00000590347 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-228ENST00000590347 RRBP1Q9P2E9 1410 aaKnown RBP20.5■□□□□ 0.87
CIRBP-228ENST00000590347 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
CIRBP-228ENST00000590347 PLEKHG5O94827 1062 aa20.49■□□□□ 0.87
CIRBP-228ENST00000590347 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
CIRBP-228ENST00000590347 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
CIRBP-228ENST00000590347 SETD5Q9C0A6 1442 aa20.47■□□□□ 0.87
CIRBP-228ENST00000590347 GSE1Q14687 1217 aa20.46■□□□□ 0.87
CIRBP-228ENST00000590347 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
CIRBP-228ENST00000590347 ARXQ96QS3 562 aa20.45■□□□□ 0.86
CIRBP-228ENST00000590347 WASHC2CQ9Y4E1 1318 aa20.45■□□□□ 0.86
CIRBP-228ENST00000590347 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.862e-10■■■■■ 31.7
CIRBP-228ENST00000590347 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
CIRBP-228ENST00000590347 C11orf95C9JLR9 678 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-228ENST00000590347 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
CIRBP-228ENST00000590347 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
CIRBP-228ENST00000590347 KIF21AQ7Z4S6 1674 aa20.39■□□□□ 0.86
CIRBP-228ENST00000590347 PDE4AP27815 886 aa20.38■□□□□ 0.85
CIRBP-228ENST00000590347 NFKBIBQ15653 356 aa20.38■□□□□ 0.85
CIRBP-228ENST00000590347 ZMYND15Q9H091 742 aa20.38■□□□□ 0.85
CIRBP-228ENST00000590347 FBLN2P98095 1184 aa20.38■□□□□ 0.85
CIRBP-228ENST00000590347 DCAF11Q8TEB1 546 aa20.37■□□□□ 0.85
CIRBP-228ENST00000590347 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
CIRBP-228ENST00000590347 PRKRIP1Q9H875 184 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-228ENST00000590347 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
CIRBP-228ENST00000590347 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.84
CIRBP-228ENST00000590347 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.84
CIRBP-228ENST00000590347 USP35Q9P2H5 1018 aa20.31■□□□□ 0.84
CIRBP-228ENST00000590347 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-228ENST00000590347 FRAT2O75474 233 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms