RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
MBD1-222ENST00000590208 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
MBD1-222ENST00000590208 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
MBD1-222ENST00000590208 ANP32CO43423 234 aa22.21■■□□□ 1.15
MBD1-222ENST00000590208 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
MBD1-222ENST00000590208 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
MBD1-222ENST00000590208 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
MBD1-222ENST00000590208 IRX6P78412 446 aaPredicted RBP22.17■■□□□ 1.14
MBD1-222ENST00000590208 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
MBD1-222ENST00000590208 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
MBD1-222ENST00000590208 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.13
MBD1-222ENST00000590208 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
MBD1-222ENST00000590208 KIF27Q86VH2 1401 aa22.08■■□□□ 1.12
MBD1-222ENST00000590208 FANCIQ9NVI1 1328 aa22.08■■□□□ 1.12
MBD1-222ENST00000590208 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
MBD1-222ENST00000590208 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
MBD1-222ENST00000590208 NESP48681 1621 aa22.05■■□□□ 1.12
MBD1-222ENST00000590208 HNRNPUQ00839 825 aaKnown RBP eCLIP22.04■■□□□ 1.12
MBD1-222ENST00000590208 TIAM1Q13009 1591 aa22.03■■□□□ 1.12
MBD1-222ENST00000590208 CUX1P39880 1505 aa22.02■■□□□ 1.12
MBD1-222ENST00000590208 TIMELESSQ9UNS1 1208 aa22.02■■□□□ 1.12
MBD1-222ENST00000590208 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
MBD1-222ENST00000590208 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
MBD1-222ENST00000590208 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
MBD1-222ENST00000590208 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
MBD1-222ENST00000590208 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
MBD1-222ENST00000590208 DEKP35659 375 aaKnown RBP21.85■■□□□ 1.09
MBD1-222ENST00000590208 IGF1RP08069 1367 aa21.85■■□□□ 1.09
MBD1-222ENST00000590208 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
MBD1-222ENST00000590208 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.08
MBD1-222ENST00000590208 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.08
MBD1-222ENST00000590208 CCDC184Q52MB2 194 aa21.82■■□□□ 1.08
MBD1-222ENST00000590208 CFTRP13569 1480 aa21.77■■□□□ 1.08
MBD1-222ENST00000590208 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.07
MBD1-222ENST00000590208 WASHC2AQ641Q2 1341 aa21.76■■□□□ 1.07
MBD1-222ENST00000590208 PCF11O94913 1555 aaKnown RBP21.75■■□□□ 1.07
MBD1-222ENST00000590208 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
MBD1-222ENST00000590208 NBR1Q14596 966 aa21.74■■□□□ 1.07
MBD1-222ENST00000590208 ERICH6BQ5W0A0 696 aa21.73■■□□□ 1.07
MBD1-222ENST00000590208 CCDC18Q5T9S5 1454 aa21.72■■□□□ 1.07
MBD1-222ENST00000590208 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
MBD1-222ENST00000590208 FAM9BQ8IZU0 186 aa21.72■■□□□ 1.07
MBD1-222ENST00000590208 HSPA5P11021 654 aaKnown RBP21.71■■□□□ 1.07
MBD1-222ENST00000590208 PAK3O75914 559 aaPredicted RBP21.71■■□□□ 1.07
MBD1-222ENST00000590208 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
MBD1-222ENST00000590208 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
MBD1-222ENST00000590208 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
MBD1-222ENST00000590208 NOP58Q9Y2X3 529 aaKnown RBP21.67■■□□□ 1.06
MBD1-222ENST00000590208 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
MBD1-222ENST00000590208 KDM5BQ9UGL1 1544 aa21.66■■□□□ 1.06
MBD1-222ENST00000590208 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
MBD1-222ENST00000590208 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.066e-7■■■□□ 18.9
MBD1-222ENST00000590208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.64■■□□□ 1.05
MBD1-222ENST00000590208 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.05
MBD1-222ENST00000590208 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
MBD1-222ENST00000590208 C11orf95C9JLR9 678 aaPredicted RBP21.61■■□□□ 1.05
MBD1-222ENST00000590208 HFM1A2PYH4 1435 aa21.61■■□□□ 1.05
MBD1-222ENST00000590208 PRKRIP1Q9H875 184 aaPredicted RBP21.59■■□□□ 1.05
MBD1-222ENST00000590208 PRKCSHP14314 528 aaPredicted RBP21.59■■□□□ 1.05
MBD1-222ENST00000590208 KIF21AQ7Z4S6 1674 aa21.58■■□□□ 1.05
MBD1-222ENST00000590208 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
MBD1-222ENST00000590208 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
MBD1-222ENST00000590208 PTPN23Q9H3S7 1636 aa21.58■■□□□ 1.05
MBD1-222ENST00000590208 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
MBD1-222ENST00000590208 NAIPQ13075 1403 aa21.57■■□□□ 1.04
MBD1-222ENST00000590208 ZBED9Q6R2W3 1325 aa21.56■■□□□ 1.04
MBD1-222ENST00000590208 CNTLNQ9NXG0 1405 aa21.56■■□□□ 1.04
MBD1-222ENST00000590208 FYCO1Q9BQS8 1478 aa21.55■■□□□ 1.04
MBD1-222ENST00000590208 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
MBD1-222ENST00000590208 CASKIN1Q8WXD9 1431 aa21.54■■□□□ 1.04
MBD1-222ENST00000590208 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
MBD1-222ENST00000590208 RRP7BPQ9NSQ0 103 aa21.52■■□□□ 1.04
MBD1-222ENST00000590208 NCOA2Q15596 1464 aa21.52■■□□□ 1.04
MBD1-222ENST00000590208 MTUS2Q5JR59 1369 aa21.52■■□□□ 1.04
MBD1-222ENST00000590208 CHIC2Q9UKJ5 165 aa21.49■■□□□ 1.03
MBD1-222ENST00000590208 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
MBD1-222ENST00000590208 AKNAQ7Z591 1439 aa21.49■■□□□ 1.03
MBD1-222ENST00000590208 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
MBD1-222ENST00000590208 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
MBD1-222ENST00000590208 CCDC7Q96M83 1385 aa21.47■■□□□ 1.03
MBD1-222ENST00000590208 FMN1Q68DA7 1419 aa21.47■■□□□ 1.03
MBD1-222ENST00000590208 L3MBTL2Q969R5 705 aa21.46■■□□□ 1.03
MBD1-222ENST00000590208 FOXD1Q16676 465 aa21.45■■□□□ 1.02
MBD1-222ENST00000590208 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
MBD1-222ENST00000590208 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
MBD1-222ENST00000590208 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
MBD1-222ENST00000590208 DENND4BO75064 1496 aaPredicted RBP21.44■■□□□ 1.02
MBD1-222ENST00000590208 ANP32AP39687 249 aaKnown RBP21.43■■□□□ 1.02
MBD1-222ENST00000590208 NCOA1Q15788 1441 aa21.43■■□□□ 1.02
MBD1-222ENST00000590208 URB2Q14146 1524 aaKnown RBP21.43■■□□□ 1.02
MBD1-222ENST00000590208 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
MBD1-222ENST00000590208 ZBTB47Q9UFB7 747 aaPredicted RBP21.4■■□□□ 1.02
MBD1-222ENST00000590208 MYOM3Q5VTT5 1437 aa21.4■■□□□ 1.02
MBD1-222ENST00000590208 EFCAB5A4FU69 1503 aa21.38■■□□□ 1.01
MBD1-222ENST00000590208 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
MBD1-222ENST00000590208 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
MBD1-222ENST00000590208 KIF7Q2M1P5 1343 aa21.37■■□□□ 1.01
MBD1-222ENST00000590208 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
MBD1-222ENST00000590208 MPHOSPH9Q99550 1183 aa21.35■■□□□ 1.01
MBD1-222ENST00000590208 SALL2Q9Y467 1007 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms