RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 GAPVD1Q14C86 1478 aa24.97■■□□□ 1.59
RFX1-206ENST00000589760 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
RFX1-206ENST00000589760 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
RFX1-206ENST00000589760 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
RFX1-206ENST00000589760 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
RFX1-206ENST00000589760 FBLN2P98095 1184 aa24.85■■□□□ 1.57
RFX1-206ENST00000589760 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
RFX1-206ENST00000589760 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
RFX1-206ENST00000589760 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
RFX1-206ENST00000589760 ATXN8OSP0DMR3 200 aa24.78■■□□□ 1.56
RFX1-206ENST00000589760 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
RFX1-206ENST00000589760 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
RFX1-206ENST00000589760 U3KPZ7 1027 aaPredicted RBP24.68■■□□□ 1.54
RFX1-206ENST00000589760 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
RFX1-206ENST00000589760 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
RFX1-206ENST00000589760 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
RFX1-206ENST00000589760 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
RFX1-206ENST00000589760 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
RFX1-206ENST00000589760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
RFX1-206ENST00000589760 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
RFX1-206ENST00000589760 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
RFX1-206ENST00000589760 POTEDQ86YR6 584 aa24.63■■□□□ 1.53
RFX1-206ENST00000589760 CUL7Q14999 1698 aa24.62■■□□□ 1.53
RFX1-206ENST00000589760 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
RFX1-206ENST00000589760 ARHGEF11O15085 1522 aa24.59■■□□□ 1.53
RFX1-206ENST00000589760 CEP170Q5SW79 1584 aa24.56■■□□□ 1.52
RFX1-206ENST00000589760 SAMD1Q6SPF0 538 aaPredicted RBP24.56■■□□□ 1.52
RFX1-206ENST00000589760 IGF1RP08069 1367 aa24.55■■□□□ 1.52
RFX1-206ENST00000589760 NUP160Q12769 1436 aa24.52■■□□□ 1.52
RFX1-206ENST00000589760 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
RFX1-206ENST00000589760 CARMIL1Q5VZK9 1371 aa24.44■■□□□ 1.5
RFX1-206ENST00000589760 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
RFX1-206ENST00000589760 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
RFX1-206ENST00000589760 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
RFX1-206ENST00000589760 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
RFX1-206ENST00000589760 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
RFX1-206ENST00000589760 ERCC6L2Q5T890 1561 aa24.3■■□□□ 1.48
RFX1-206ENST00000589760 ATF5Q9Y2D1 282 aaPredicted RBP24.29■■□□□ 1.48
RFX1-206ENST00000589760 APLP2Q06481 763 aa24.28■■□□□ 1.48
RFX1-206ENST00000589760 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
RFX1-206ENST00000589760 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
RFX1-206ENST00000589760 EEA1Q15075 1411 aa24.23■■□□□ 1.47
RFX1-206ENST00000589760 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
RFX1-206ENST00000589760 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
RFX1-206ENST00000589760 PRXQ9BXM0 1461 aa24.2■■□□□ 1.47
RFX1-206ENST00000589760 RNF39Q9H2S5 420 aa24.16■■□□□ 1.46
RFX1-206ENST00000589760 FAM9AQ8IZU1 332 aaPredicted RBP24.09■■□□□ 1.45
RFX1-206ENST00000589760 UGGT2Q9NYU1 1516 aa24.05■■□□□ 1.44
RFX1-206ENST00000589760 CARMIL2Q6F5E8 1435 aa24.05■■□□□ 1.44
RFX1-206ENST00000589760 KIF21BO75037 1637 aa24.03■■□□□ 1.44
RFX1-206ENST00000589760 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
RFX1-206ENST00000589760 KIAA0556O60303 1618 aa23.99■■□□□ 1.43
RFX1-206ENST00000589760 TNIKQ9UKE5 1360 aa23.96■■□□□ 1.43
RFX1-206ENST00000589760 C1QBPQ07021 282 aaKnown RBP23.94■■□□□ 1.42
RFX1-206ENST00000589760 PTPRGP23470 1445 aa23.93■■□□□ 1.42
RFX1-206ENST00000589760 GOLGA3Q08378 1498 aa23.92■■□□□ 1.42
RFX1-206ENST00000589760 ADCY10Q96PN6 1610 aa23.92■■□□□ 1.42
RFX1-206ENST00000589760 ZNF219Q9P2Y4 722 aaPredicted RBP23.91■■□□□ 1.42
RFX1-206ENST00000589760 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
RFX1-206ENST00000589760 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
RFX1-206ENST00000589760 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
RFX1-206ENST00000589760 SAMD9Q5K651 1589 aa23.82■■□□□ 1.4
RFX1-206ENST00000589760 SPINK5Q9NQ38 1064 aaPredicted RBP23.81■■□□□ 1.4
RFX1-206ENST00000589760 UACAQ9BZF9 1416 aa23.79■■□□□ 1.4
RFX1-206ENST00000589760 UHRF1BP1LA0JNW5 1464 aa23.78■■□□□ 1.4
RFX1-206ENST00000589760 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
RFX1-206ENST00000589760 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
RFX1-206ENST00000589760 ABCC2Q92887 1545 aa23.77■■□□□ 1.4
RFX1-206ENST00000589760 MAPKBP1O60336 1514 aa23.75■■□□□ 1.39
RFX1-206ENST00000589760 CAPN15O75808 1086 aa23.74■■□□□ 1.39
RFX1-206ENST00000589760 P3H3Q8IVL6 736 aa23.72■■□□□ 1.39
RFX1-206ENST00000589760 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
RFX1-206ENST00000589760 ABCA8O94911 1581 aa23.7■■□□□ 1.38
RFX1-206ENST00000589760 EFCAB5A4FU69 1503 aa23.7■■□□□ 1.38
RFX1-206ENST00000589760 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
RFX1-206ENST00000589760 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
RFX1-206ENST00000589760 KDM5BQ9UGL1 1544 aa23.67■■□□□ 1.38
RFX1-206ENST00000589760 DIP2BQ9P265 1576 aa23.63■■□□□ 1.37
RFX1-206ENST00000589760 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
RFX1-206ENST00000589760 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
RFX1-206ENST00000589760 FKBP8Q14318 412 aa23.62■■□□□ 1.37
RFX1-206ENST00000589760 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
RFX1-206ENST00000589760 ASXL2Q76L83 1435 aa23.58■■□□□ 1.36
RFX1-206ENST00000589760 TSPOAP1O95153 1857 aa23.58■■□□□ 1.36
RFX1-206ENST00000589760 FAM69CQ0P6D2 419 aa23.56■■□□□ 1.36
RFX1-206ENST00000589760 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
RFX1-206ENST00000589760 GLI2P10070 1586 aa23.5■■□□□ 1.35
RFX1-206ENST00000589760 POLA2Q14181 598 aa23.48■■□□□ 1.35
RFX1-206ENST00000589760 ATP10BO94823 1461 aa23.47■■□□□ 1.35
RFX1-206ENST00000589760 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
RFX1-206ENST00000589760 EPRSP07814 1512 aaKnown RBP23.46■■□□□ 1.35
RFX1-206ENST00000589760 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.34
RFX1-206ENST00000589760 FMN1Q68DA7 1419 aa23.45■■□□□ 1.34
RFX1-206ENST00000589760 ARID3CA6NKF2 412 aa23.43■■□□□ 1.34
RFX1-206ENST00000589760 MAP3K4Q9Y6R4 1608 aa23.43■■□□□ 1.34
RFX1-206ENST00000589760 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
RFX1-206ENST00000589760 PPRC1Q5VV67 1664 aaKnown RBP23.4■■□□□ 1.34
RFX1-206ENST00000589760 CFAP43Q8NDM7 1665 aa23.4■■□□□ 1.34
RFX1-206ENST00000589760 CLIP1P30622 1438 aa23.39■■□□□ 1.33
RFX1-206ENST00000589760 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms