RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
GFAP-216ENST00000589701 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
GFAP-216ENST00000589701 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
GFAP-216ENST00000589701 DIEXFQ68CQ4 756 aaKnown RBP16.4■□□□□ 0.22
GFAP-216ENST00000589701 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
GFAP-216ENST00000589701 ERICH6Q7L0X2 663 aa16.36■□□□□ 0.21
GFAP-216ENST00000589701 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
GFAP-216ENST00000589701 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
GFAP-216ENST00000589701 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
GFAP-216ENST00000589701 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
GFAP-216ENST00000589701 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
GFAP-216ENST00000589701 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
GFAP-216ENST00000589701 FHOD3Q2V2M9 1422 aa16.24■□□□□ 0.19
GFAP-216ENST00000589701 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
GFAP-216ENST00000589701 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
GFAP-216ENST00000589701 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
GFAP-216ENST00000589701 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
GFAP-216ENST00000589701 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.18
GFAP-216ENST00000589701 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
GFAP-216ENST00000589701 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
GFAP-216ENST00000589701 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
GFAP-216ENST00000589701 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
GFAP-216ENST00000589701 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
GFAP-216ENST00000589701 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
GFAP-216ENST00000589701 CHD1O14646 1710 aa16.17■□□□□ 0.18
GFAP-216ENST00000589701 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
GFAP-216ENST00000589701 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
GFAP-216ENST00000589701 PHLDB1Q86UU1 1377 aa16.15■□□□□ 0.18
GFAP-216ENST00000589701 MIER1Q8N108 512 aa16.14■□□□□ 0.17
GFAP-216ENST00000589701 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
GFAP-216ENST00000589701 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
GFAP-216ENST00000589701 PCF11O94913 1555 aaKnown RBP16.12■□□□□ 0.17
GFAP-216ENST00000589701 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
GFAP-216ENST00000589701 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
GFAP-216ENST00000589701 FBLN2P98095 1184 aa16.09■□□□□ 0.17
GFAP-216ENST00000589701 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
GFAP-216ENST00000589701 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
GFAP-216ENST00000589701 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
GFAP-216ENST00000589701 GAPVD1Q14C86 1478 aa16.08■□□□□ 0.16
GFAP-216ENST00000589701 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
GFAP-216ENST00000589701 CUL7Q14999 1698 aa16.07■□□□□ 0.16
GFAP-216ENST00000589701 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
GFAP-216ENST00000589701 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
GFAP-216ENST00000589701 SIN3AQ96ST3 1273 aa16.04■□□□□ 0.16
GFAP-216ENST00000589701 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
GFAP-216ENST00000589701 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.16
GFAP-216ENST00000589701 PBRM1Q86U86 1689 aa16.02■□□□□ 0.15
GFAP-216ENST00000589701 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.15
GFAP-216ENST00000589701 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
GFAP-216ENST00000589701 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
GFAP-216ENST00000589701 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
GFAP-216ENST00000589701 GTF3C3Q9Y5Q9 886 aa15.99■□□□□ 0.15
GFAP-216ENST00000589701 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
GFAP-216ENST00000589701 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
GFAP-216ENST00000589701 MTUS2Q5JR59 1369 aa15.95■□□□□ 0.14
GFAP-216ENST00000589701 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
GFAP-216ENST00000589701 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
GFAP-216ENST00000589701 CFAP43Q8NDM7 1665 aa15.93■□□□□ 0.14
GFAP-216ENST00000589701 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
GFAP-216ENST00000589701 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
GFAP-216ENST00000589701 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
GFAP-216ENST00000589701 CHIC2Q9UKJ5 165 aa15.91■□□□□ 0.14
GFAP-216ENST00000589701 MAP3K1Q13233 1512 aa15.91■□□□□ 0.14
GFAP-216ENST00000589701 LRRIQ1Q96JM4 1722 aa15.91■□□□□ 0.14
GFAP-216ENST00000589701 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
GFAP-216ENST00000589701 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
GFAP-216ENST00000589701 PTPRKQ15262 1439 aa15.87■□□□□ 0.13
GFAP-216ENST00000589701 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
GFAP-216ENST00000589701 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
GFAP-216ENST00000589701 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
GFAP-216ENST00000589701 FGD6Q6ZV73 1430 aa15.85■□□□□ 0.13
GFAP-216ENST00000589701 KCNH8Q96L42 1107 aa15.83■□□□□ 0.13
GFAP-216ENST00000589701 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
GFAP-216ENST00000589701 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
GFAP-216ENST00000589701 NCOA2Q15596 1464 aa15.82■□□□□ 0.12
GFAP-216ENST00000589701 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
GFAP-216ENST00000589701 NUP160Q12769 1436 aa15.8■□□□□ 0.12
GFAP-216ENST00000589701 TRHP20396 242 aaPredicted RBP15.79■□□□□ 0.12
GFAP-216ENST00000589701 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
GFAP-216ENST00000589701 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.11
GFAP-216ENST00000589701 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
GFAP-216ENST00000589701 ANP32EQ9BTT0 268 aa15.75■□□□□ 0.11
GFAP-216ENST00000589701 FOXD1Q16676 465 aa15.75■□□□□ 0.11
GFAP-216ENST00000589701 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
GFAP-216ENST00000589701 MYOM3Q5VTT5 1437 aa15.75■□□□□ 0.11
GFAP-216ENST00000589701 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
GFAP-216ENST00000589701 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
GFAP-216ENST00000589701 TRIM52Q96A61 297 aa15.72■□□□□ 0.11
GFAP-216ENST00000589701 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
GFAP-216ENST00000589701 NAIPQ13075 1403 aa15.69■□□□□ 0.1
GFAP-216ENST00000589701 ERCC6L2Q5T890 1561 aa15.69■□□□□ 0.1
GFAP-216ENST00000589701 SUPT6HQ7KZ85 1726 aaKnown RBP15.69■□□□□ 0.1
GFAP-216ENST00000589701 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
GFAP-216ENST00000589701 PTPN23Q9H3S7 1636 aa15.67■□□□□ 0.1
GFAP-216ENST00000589701 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
GFAP-216ENST00000589701 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
GFAP-216ENST00000589701 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
GFAP-216ENST00000589701 UGGT2Q9NYU1 1516 aa15.66■□□□□ 0.1
GFAP-216ENST00000589701 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
GFAP-216ENST00000589701 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms