RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 RIMBP3BA6NNM3 1639 aa35.12■■■■□ 3.21
R3HDM4-204ENST00000589428 RIMBP3Q9UFD9 1639 aa35.12■■■■□ 3.21
R3HDM4-204ENST00000589428 KIAA0586Q9BVV6 1533 aa35.1■■■■□ 3.21
R3HDM4-204ENST00000589428 SHROOM2Q13796 1616 aa35.06■■■■□ 3.2
R3HDM4-204ENST00000589428 IQGAP2Q13576 1575 aa34.99■■■■□ 3.19
R3HDM4-204ENST00000589428 KIF21BO75037 1637 aa34.98■■■■□ 3.19
R3HDM4-204ENST00000589428 JPH4Q96JJ6 628 aa34.98■■■■□ 3.19
R3HDM4-204ENST00000589428 CTTNBP2Q8WZ74 1663 aa34.95■■■■□ 3.19
R3HDM4-204ENST00000589428 PRG4Q92954 1404 aaPredicted RBP34.92■■■■□ 3.18
R3HDM4-204ENST00000589428 ERCC6L2Q5T890 1561 aa34.9■■■■□ 3.18
R3HDM4-204ENST00000589428 ARAP1Q96P48 1450 aa34.88■■■■□ 3.17
R3HDM4-204ENST00000589428 GOLGA3Q08378 1498 aa34.8■■■■□ 3.16
R3HDM4-204ENST00000589428 CYB5RLQ6IPT4 315 aa34.78■■■■□ 3.16
R3HDM4-204ENST00000589428 UGGT2Q9NYU1 1516 aa34.78■■■■□ 3.16
R3HDM4-204ENST00000589428 CARMIL2Q6F5E8 1435 aa34.75■■■■□ 3.15
R3HDM4-204ENST00000589428 EHMT2Q96KQ7 1210 aa34.72■■■■□ 3.15
R3HDM4-204ENST00000589428 DISP1Q96F81 1524 aa34.67■■■■□ 3.14
R3HDM4-204ENST00000589428 UBTFP17480 764 aaKnown RBP34.67■■■■□ 3.14
R3HDM4-204ENST00000589428 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
R3HDM4-204ENST00000589428 TNIKQ9UKE5 1360 aa34.59■■■■□ 3.13
R3HDM4-204ENST00000589428 PTPRGP23470 1445 aa34.54■■■■□ 3.12
R3HDM4-204ENST00000589428 LOC105371045A0A1W2PR82 267 aa34.52■■■■□ 3.12
R3HDM4-204ENST00000589428 TTBK1Q5TCY1 1321 aaPredicted RBP34.5■■■■□ 3.11
R3HDM4-204ENST00000589428 SAMD9Q5K651 1589 aa34.5■■■■□ 3.11
R3HDM4-204ENST00000589428 RANGAP1P46060 587 aaPredicted RBP34.49■■■■□ 3.11
R3HDM4-204ENST00000589428 EFCAB5A4FU69 1503 aa34.43■■■■□ 3.1
R3HDM4-204ENST00000589428 P3H3Q8IVL6 736 aa34.39■■■■□ 3.1
R3HDM4-204ENST00000589428 ADCY10Q96PN6 1610 aa34.35■■■■□ 3.09
R3HDM4-204ENST00000589428 UACAQ9BZF9 1416 aa34.32■■■■□ 3.09
R3HDM4-204ENST00000589428 FHOD3Q2V2M9 1422 aa34.3■■■■□ 3.08
R3HDM4-204ENST00000589428 ABCC2Q92887 1545 aa34.28■■■■□ 3.08
R3HDM4-204ENST00000589428 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
R3HDM4-204ENST00000589428 ARHGAP35Q9NRY4 1499 aa34.26■■■■□ 3.07
R3HDM4-204ENST00000589428 PLB1Q6P1J6 1458 aa34.25■■■■□ 3.07
R3HDM4-204ENST00000589428 NPM1P06748 294 aaKnown RBP eCLIP34.24■■■■□ 3.07
R3HDM4-204ENST00000589428 ABCA8O94911 1581 aa34.22■■■■□ 3.07
R3HDM4-204ENST00000589428 CLIP1P30622 1438 aa34.17■■■■□ 3.06
R3HDM4-204ENST00000589428 RAPGEF6Q8TEU7 1601 aa34.12■■■■□ 3.05
R3HDM4-204ENST00000589428 KDM5BQ9UGL1 1544 aa34.11■■■■□ 3.05
R3HDM4-204ENST00000589428 FMN1Q68DA7 1419 aa34.1■■■■□ 3.05
R3HDM4-204ENST00000589428 MAPKBP1O60336 1514 aa34.09■■■■□ 3.05
R3HDM4-204ENST00000589428 CEP162Q5TB80 1403 aa34.09■■■■□ 3.05
R3HDM4-204ENST00000589428 ZCCHC11Q5TAX3 1644 aaKnown RBP34.06■■■■□ 3.04
R3HDM4-204ENST00000589428 TRHP20396 242 aaPredicted RBP34.01■■■■□ 3.04
R3HDM4-204ENST00000589428 NUP153P49790 1475 aaKnown RBP33.98■■■■□ 3.03
R3HDM4-204ENST00000589428 ASXL2Q76L83 1435 aa33.95■■■■□ 3.03
R3HDM4-204ENST00000589428 ARID3CA6NKF2 412 aa33.94■■■■□ 3.02
R3HDM4-204ENST00000589428 HECW1Q76N89 1606 aa33.93■■■■□ 3.02
R3HDM4-204ENST00000589428 ATP10BO94823 1461 aa33.91■■■■□ 3.02
R3HDM4-204ENST00000589428 ABCC10Q5T3U5 1492 aa33.88■■■■□ 3.01
R3HDM4-204ENST00000589428 ATP1B4Q9UN42 357 aaPredicted RBP33.87■■■■□ 3.01
R3HDM4-204ENST00000589428 PCF11O94913 1555 aaKnown RBP33.87■■■■□ 3.01
R3HDM4-204ENST00000589428 DIP2BQ9P265 1576 aa33.86■■■■□ 3.01
R3HDM4-204ENST00000589428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
R3HDM4-204ENST00000589428 HNRNPUL2Q1KMD3 747 aaKnown RBP33.85■■■■□ 3.01
R3HDM4-204ENST00000589428 WDR7Q9Y4E6 1490 aa33.85■■■■□ 3.01
R3HDM4-204ENST00000589428 CASKIN1Q8WXD9 1431 aa33.84■■■■□ 3.01
R3HDM4-204ENST00000589428 KIF13AQ9H1H9 1805 aa33.82■■■■□ 3.01
R3HDM4-204ENST00000589428 FYCO1Q9BQS8 1478 aa33.8■■■■□ 3
R3HDM4-204ENST00000589428 FAM69CQ0P6D2 419 aa33.79■■■■□ 3
R3HDM4-204ENST00000589428 EPRSP07814 1512 aaKnown RBP33.79■■■■□ 3
R3HDM4-204ENST00000589428 CDK13Q14004 1512 aaKnown RBP33.78■■■■□ 3
R3HDM4-204ENST00000589428 GLI2P10070 1586 aa33.72■■■□□ 2.99
R3HDM4-204ENST00000589428 CCDC18Q5T9S5 1454 aa33.72■■■□□ 2.99
R3HDM4-204ENST00000589428 LRRIQ1Q96JM4 1722 aa33.69■■■□□ 2.98
R3HDM4-204ENST00000589428 PLEKHD1A6NEE1 506 aa33.67■■■□□ 2.98
R3HDM4-204ENST00000589428 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
R3HDM4-204ENST00000589428 VPS8Q8N3P4 1428 aa33.66■■■□□ 2.98
R3HDM4-204ENST00000589428 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
R3HDM4-204ENST00000589428 MAP3K4Q9Y6R4 1608 aa33.58■■■□□ 2.97
R3HDM4-204ENST00000589428 CFAP43Q8NDM7 1665 aa33.55■■■□□ 2.96
R3HDM4-204ENST00000589428 TSPOAP1O95153 1857 aa33.55■■■□□ 2.96
R3HDM4-204ENST00000589428 ABCA9Q8IUA7 1624 aa33.52■■■□□ 2.96
R3HDM4-204ENST00000589428 TROQ12816 1431 aaPredicted RBP33.52■■■□□ 2.96
R3HDM4-204ENST00000589428 CD109Q6YHK3 1445 aa33.49■■■□□ 2.95
R3HDM4-204ENST00000589428 KIF14Q15058 1648 aa33.46■■■□□ 2.95
R3HDM4-204ENST00000589428 PPRC1Q5VV67 1664 aaKnown RBP33.45■■■□□ 2.95
R3HDM4-204ENST00000589428 MAGI3Q5TCQ9 1506 aa33.44■■■□□ 2.94
R3HDM4-204ENST00000589428 TEX14Q8IWB6 1497 aa33.43■■■□□ 2.94
R3HDM4-204ENST00000589428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.43■■■□□ 2.945e-6■■■■□ 23.9
R3HDM4-204ENST00000589428 TTC37Q6PGP7 1564 aa33.41■■■□□ 2.94
R3HDM4-204ENST00000589428 TIAM1Q13009 1591 aa33.39■■■□□ 2.94
R3HDM4-204ENST00000589428 MTUS2Q5JR59 1369 aa33.38■■■□□ 2.93
R3HDM4-204ENST00000589428 EHBP1L1Q8N3D4 1523 aa33.35■■■□□ 2.93
R3HDM4-204ENST00000589428 MAP3K1Q13233 1512 aa33.32■■■□□ 2.92
R3HDM4-204ENST00000589428 APLP2Q06481 763 aa33.3■■■□□ 2.92
R3HDM4-204ENST00000589428 MYO5CQ9NQX4 1742 aa33.28■■■□□ 2.92
R3HDM4-204ENST00000589428 KDM6BO15054 1643 aa33.27■■■□□ 2.92
R3HDM4-204ENST00000589428 PLCH2O75038 1416 aa33.23■■■□□ 2.91
R3HDM4-204ENST00000589428 LRRC9Q6ZRR7 1453 aa33.22■■■□□ 2.91
R3HDM4-204ENST00000589428 CFAP74Q9C0B2 1584 aa33.22■■■□□ 2.91
R3HDM4-204ENST00000589428 NEO1Q92859 1461 aa33.22■■■□□ 2.91
R3HDM4-204ENST00000589428 FANCAO15360 1455 aa33.2■■■□□ 2.91
R3HDM4-204ENST00000589428 ARAP3Q8WWN8 1544 aa33.2■■■□□ 2.91
R3HDM4-204ENST00000589428 PHLDB1Q86UU1 1377 aa33.18■■■□□ 2.9
R3HDM4-204ENST00000589428 SUPT6HQ7KZ85 1726 aaKnown RBP33.18■■■□□ 2.9
R3HDM4-204ENST00000589428 PREX2Q70Z35 1606 aa33.17■■■□□ 2.9
R3HDM4-204ENST00000589428 ARHGAP5Q13017 1502 aa33.16■■■□□ 2.9
R3HDM4-204ENST00000589428 CDC42BPAQ5VT25 1732 aa33.13■■■□□ 2.89
R3HDM4-204ENST00000589428 CCNB3Q8WWL7 1395 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms