RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
BCAS3-220ENST00000588720 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
BCAS3-220ENST00000588720 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
BCAS3-220ENST00000588720 TSPY4P0CV99 314 aa16.08■□□□□ 0.17
BCAS3-220ENST00000588720 TSPY10P0CW01 314 aa16.08■□□□□ 0.17
BCAS3-220ENST00000588720 ANP32CO43423 234 aa16.08■□□□□ 0.16
BCAS3-220ENST00000588720 IGF1RP08069 1367 aa16.07■□□□□ 0.16
BCAS3-220ENST00000588720 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
BCAS3-220ENST00000588720 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
BCAS3-220ENST00000588720 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
BCAS3-220ENST00000588720 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
BCAS3-220ENST00000588720 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
BCAS3-220ENST00000588720 RRP7BPQ9NSQ0 103 aa16.04■□□□□ 0.16
BCAS3-220ENST00000588720 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
BCAS3-220ENST00000588720 CFDP1Q9UEE9 299 aaPredicted RBP16.01■□□□□ 0.15
BCAS3-220ENST00000588720 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
BCAS3-220ENST00000588720 KIF21BO75037 1637 aa15.98■□□□□ 0.15
BCAS3-220ENST00000588720 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
BCAS3-220ENST00000588720 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
BCAS3-220ENST00000588720 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
BCAS3-220ENST00000588720 CUX1P39880 1505 aa15.95■□□□□ 0.14
BCAS3-220ENST00000588720 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
BCAS3-220ENST00000588720 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
BCAS3-220ENST00000588720 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
BCAS3-220ENST00000588720 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
BCAS3-220ENST00000588720 NESP48681 1621 aa15.93■□□□□ 0.14
BCAS3-220ENST00000588720 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
BCAS3-220ENST00000588720 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
BCAS3-220ENST00000588720 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
BCAS3-220ENST00000588720 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
BCAS3-220ENST00000588720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.13
BCAS3-220ENST00000588720 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
BCAS3-220ENST00000588720 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
BCAS3-220ENST00000588720 POLA1P09884 1462 aaPredicted RBP15.83■□□□□ 0.12
BCAS3-220ENST00000588720 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.12
BCAS3-220ENST00000588720 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
BCAS3-220ENST00000588720 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
BCAS3-220ENST00000588720 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
BCAS3-220ENST00000588720 DNMBPQ6XZF7 1577 aa15.8■□□□□ 0.12
BCAS3-220ENST00000588720 MIER1Q8N108 512 aa15.8■□□□□ 0.12
BCAS3-220ENST00000588720 EIF4G2P78344 907 aaKnown RBP eCLIP15.79■□□□□ 0.12
BCAS3-220ENST00000588720 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.12
BCAS3-220ENST00000588720 GLIPR1L2Q4G1C9 344 aa15.78■□□□□ 0.12
BCAS3-220ENST00000588720 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.12
BCAS3-220ENST00000588720 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
BCAS3-220ENST00000588720 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
BCAS3-220ENST00000588720 BCANQ96GW7 911 aa15.76■□□□□ 0.11
BCAS3-220ENST00000588720 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
BCAS3-220ENST00000588720 KDM2AQ9Y2K7 1162 aa15.75■□□□□ 0.11
BCAS3-220ENST00000588720 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
BCAS3-220ENST00000588720 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
BCAS3-220ENST00000588720 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
BCAS3-220ENST00000588720 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
BCAS3-220ENST00000588720 DNAJC5BQ9UF47 199 aa15.7■□□□□ 0.1
BCAS3-220ENST00000588720 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
BCAS3-220ENST00000588720 IFT140Q96RY7 1462 aa15.69■□□□□ 0.1
BCAS3-220ENST00000588720 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
BCAS3-220ENST00000588720 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
BCAS3-220ENST00000588720 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
BCAS3-220ENST00000588720 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
BCAS3-220ENST00000588720 EFCAB5A4FU69 1503 aa15.66■□□□□ 0.1
BCAS3-220ENST00000588720 FYCO1Q9BQS8 1478 aa15.63■□□□□ 0.09
BCAS3-220ENST00000588720 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
BCAS3-220ENST00000588720 PTPRGP23470 1445 aa15.63■□□□□ 0.09
BCAS3-220ENST00000588720 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
BCAS3-220ENST00000588720 MPHOSPH9Q99550 1183 aa15.62■□□□□ 0.09
BCAS3-220ENST00000588720 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
BCAS3-220ENST00000588720 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
BCAS3-220ENST00000588720 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
BCAS3-220ENST00000588720 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
BCAS3-220ENST00000588720 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
BCAS3-220ENST00000588720 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
BCAS3-220ENST00000588720 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.09
BCAS3-220ENST00000588720 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.09
BCAS3-220ENST00000588720 MYOM3Q5VTT5 1437 aa15.58■□□□□ 0.08
BCAS3-220ENST00000588720 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
BCAS3-220ENST00000588720 PKD2Q13563 968 aa15.58■□□□□ 0.08
BCAS3-220ENST00000588720 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
BCAS3-220ENST00000588720 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
BCAS3-220ENST00000588720 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
BCAS3-220ENST00000588720 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
BCAS3-220ENST00000588720 FOXD1Q16676 465 aa15.55■□□□□ 0.08
BCAS3-220ENST00000588720 CUL7Q14999 1698 aa15.54■□□□□ 0.08
BCAS3-220ENST00000588720 NUP155O75694 1391 aa15.54■□□□□ 0.08
BCAS3-220ENST00000588720 HNRNPMP52272 730 aaKnown RBP eCLIP15.53■□□□□ 0.08
BCAS3-220ENST00000588720 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
BCAS3-220ENST00000588720 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
BCAS3-220ENST00000588720 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
BCAS3-220ENST00000588720 DCAF11Q8TEB1 546 aa15.5■□□□□ 0.07
BCAS3-220ENST00000588720 KANK1Q14678 1352 aa15.5■□□□□ 0.07
BCAS3-220ENST00000588720 FKBP8Q14318 412 aa15.48■□□□□ 0.07
BCAS3-220ENST00000588720 KIAA0586Q9BVV6 1533 aa15.48■□□□□ 0.07
BCAS3-220ENST00000588720 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
BCAS3-220ENST00000588720 CDCA8Q53HL2 280 aa15.46■□□□□ 0.06
BCAS3-220ENST00000588720 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
BCAS3-220ENST00000588720 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
BCAS3-220ENST00000588720 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
BCAS3-220ENST00000588720 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
BCAS3-220ENST00000588720 NEFMP07197 916 aa15.43■□□□□ 0.06
BCAS3-220ENST00000588720 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms