RNA–Protein interactions for RNA: ENST00000588136.5

TCF3-212, Transcript of transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TCF3, Length 2,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-212ENST00000588136 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
TCF3-212ENST00000588136 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
TCF3-212ENST00000588136 NESP48681 1621 aa24.36■■□□□ 1.49
TCF3-212ENST00000588136 FHOD3Q2V2M9 1422 aa24.33■■□□□ 1.49
TCF3-212ENST00000588136 LRRC9Q6ZRR7 1453 aa24.32■■□□□ 1.48
TCF3-212ENST00000588136 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
TCF3-212ENST00000588136 PCF11O94913 1555 aaKnown RBP24.3■■□□□ 1.48
TCF3-212ENST00000588136 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
TCF3-212ENST00000588136 MYT1Q01538 1121 aa24.28■■□□□ 1.48
TCF3-212ENST00000588136 KCNH8Q96L42 1107 aa24.25■■□□□ 1.47
TCF3-212ENST00000588136 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
TCF3-212ENST00000588136 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
TCF3-212ENST00000588136 SETD5Q9C0A6 1442 aa24.21■■□□□ 1.47
TCF3-212ENST00000588136 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
TCF3-212ENST00000588136 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
TCF3-212ENST00000588136 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
TCF3-212ENST00000588136 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
TCF3-212ENST00000588136 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
TCF3-212ENST00000588136 CFAP43Q8NDM7 1665 aa24.15■■□□□ 1.46
TCF3-212ENST00000588136 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
TCF3-212ENST00000588136 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
TCF3-212ENST00000588136 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
TCF3-212ENST00000588136 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
TCF3-212ENST00000588136 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
TCF3-212ENST00000588136 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
TCF3-212ENST00000588136 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
TCF3-212ENST00000588136 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
TCF3-212ENST00000588136 SUPT16HQ9Y5B9 1047 aaKnown RBP23.99■■□□□ 1.43
TCF3-212ENST00000588136 CUL7Q14999 1698 aa23.97■■□□□ 1.43
TCF3-212ENST00000588136 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
TCF3-212ENST00000588136 EFCAB5A4FU69 1503 aa23.96■■□□□ 1.43
TCF3-212ENST00000588136 PTPRKQ15262 1439 aa23.95■■□□□ 1.42
TCF3-212ENST00000588136 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
TCF3-212ENST00000588136 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
TCF3-212ENST00000588136 LRRIQ1Q96JM4 1722 aa23.94■■□□□ 1.42
TCF3-212ENST00000588136 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
TCF3-212ENST00000588136 FMN1Q68DA7 1419 aa23.9■■□□□ 1.42
TCF3-212ENST00000588136 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
TCF3-212ENST00000588136 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
TCF3-212ENST00000588136 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.412e-6■■■■□ 23.5
TCF3-212ENST00000588136 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
TCF3-212ENST00000588136 CCDC18Q5T9S5 1454 aa23.85■■□□□ 1.41
TCF3-212ENST00000588136 ABCA5Q8WWZ7 1642 aa23.84■■□□□ 1.41
TCF3-212ENST00000588136 BCANQ96GW7 911 aa23.83■■□□□ 1.41
TCF3-212ENST00000588136 NCOA2Q15596 1464 aa23.83■■□□□ 1.4
TCF3-212ENST00000588136 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
TCF3-212ENST00000588136 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
TCF3-212ENST00000588136 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
TCF3-212ENST00000588136 SAMD9Q5K651 1589 aa23.8■■□□□ 1.4
TCF3-212ENST00000588136 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
TCF3-212ENST00000588136 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
TCF3-212ENST00000588136 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
TCF3-212ENST00000588136 TRIM52Q96A61 297 aa23.77■■□□□ 1.39
TCF3-212ENST00000588136 PTPN23Q9H3S7 1636 aa23.76■■□□□ 1.39
TCF3-212ENST00000588136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.76■■□□□ 1.396e-10■■■■■ 33.2
TCF3-212ENST00000588136 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
TCF3-212ENST00000588136 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
TCF3-212ENST00000588136 NAIPQ13075 1403 aa23.74■■□□□ 1.39
TCF3-212ENST00000588136 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
TCF3-212ENST00000588136 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
TCF3-212ENST00000588136 TIMELESSQ9UNS1 1208 aa23.69■■□□□ 1.38
TCF3-212ENST00000588136 SUPT6HQ7KZ85 1726 aaKnown RBP23.68■■□□□ 1.38
TCF3-212ENST00000588136 FOXD1Q16676 465 aa23.67■■□□□ 1.38
TCF3-212ENST00000588136 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
TCF3-212ENST00000588136 FKBP8Q14318 412 aa23.66■■□□□ 1.38
TCF3-212ENST00000588136 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
TCF3-212ENST00000588136 ANP32CO43423 234 aa23.65■■□□□ 1.38
TCF3-212ENST00000588136 EHBP1L1Q8N3D4 1523 aa23.63■■□□□ 1.37
TCF3-212ENST00000588136 KDM6BO15054 1643 aa23.63■■□□□ 1.37
TCF3-212ENST00000588136 UGGT2Q9NYU1 1516 aa23.63■■□□□ 1.37
TCF3-212ENST00000588136 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
TCF3-212ENST00000588136 PBRM1Q86U86 1689 aa23.58■■□□□ 1.37
TCF3-212ENST00000588136 KDM5BQ9UGL1 1544 aa23.57■■□□□ 1.36
TCF3-212ENST00000588136 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
TCF3-212ENST00000588136 EPRSP07814 1512 aaKnown RBP23.55■■□□□ 1.36
TCF3-212ENST00000588136 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
TCF3-212ENST00000588136 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
TCF3-212ENST00000588136 IQGAP2Q13576 1575 aa23.54■■□□□ 1.36
TCF3-212ENST00000588136 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.35
TCF3-212ENST00000588136 ZNF644Q9H582 1327 aaPredicted RBP23.51■■□□□ 1.35
TCF3-212ENST00000588136 HSPA5P11021 654 aaKnown RBP23.51■■□□□ 1.35
TCF3-212ENST00000588136 HECW1Q76N89 1606 aa23.5■■□□□ 1.35
TCF3-212ENST00000588136 CCER2I3L3R5 266 aa23.49■■□□□ 1.35
TCF3-212ENST00000588136 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
TCF3-212ENST00000588136 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
TCF3-212ENST00000588136 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
TCF3-212ENST00000588136 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
TCF3-212ENST00000588136 L3MBTL2Q969R5 705 aa23.44■■□□□ 1.34
TCF3-212ENST00000588136 WDR62O43379 1518 aa23.44■■□□□ 1.34
TCF3-212ENST00000588136 GCC2Q8IWJ2 1684 aa23.43■■□□□ 1.34
TCF3-212ENST00000588136 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
TCF3-212ENST00000588136 HNRNPUQ00839 825 aaKnown RBP eCLIP23.4■■□□□ 1.34
TCF3-212ENST00000588136 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
TCF3-212ENST00000588136 IRX6P78412 446 aaPredicted RBP23.39■■□□□ 1.34
TCF3-212ENST00000588136 MRC2Q9UBG0 1479 aa23.39■■□□□ 1.33
TCF3-212ENST00000588136 NEFLP07196 543 aa23.37■■□□□ 1.33
TCF3-212ENST00000588136 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
TCF3-212ENST00000588136 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
TCF3-212ENST00000588136 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.333e-7■■■■■ 49.2
TCF3-212ENST00000588136 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms