RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 DNAJC5Q9H3Z4 198 aa27.04■■□□□ 1.92
DDX39A-206ENST00000587730 MYT1Q01538 1121 aa27.03■■□□□ 1.92
DDX39A-206ENST00000587730 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
DDX39A-206ENST00000587730 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.92
DDX39A-206ENST00000587730 FGD5Q6ZNL6 1462 aa26.96■■□□□ 1.91
DDX39A-206ENST00000587730 LRRC9Q6ZRR7 1453 aa26.93■■□□□ 1.9
DDX39A-206ENST00000587730 CFAP43Q8NDM7 1665 aa26.88■■□□□ 1.89
DDX39A-206ENST00000587730 SETD5Q9C0A6 1442 aa26.87■■□□□ 1.89
DDX39A-206ENST00000587730 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
DDX39A-206ENST00000587730 DNMBPQ6XZF7 1577 aa26.86■■□□□ 1.89
DDX39A-206ENST00000587730 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
DDX39A-206ENST00000587730 MRC2Q9UBG0 1479 aa26.84■■□□□ 1.89
DDX39A-206ENST00000587730 URB2Q14146 1524 aaKnown RBP26.84■■□□□ 1.89
DDX39A-206ENST00000587730 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
DDX39A-206ENST00000587730 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.89
DDX39A-206ENST00000587730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.88
DDX39A-206ENST00000587730 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.882e-8■■□□□ 13.8
DDX39A-206ENST00000587730 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
DDX39A-206ENST00000587730 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
DDX39A-206ENST00000587730 MAPKBP1O60336 1514 aa26.79■■□□□ 1.88
DDX39A-206ENST00000587730 CUL7Q14999 1698 aa26.76■■□□□ 1.87
DDX39A-206ENST00000587730 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
DDX39A-206ENST00000587730 PCF11O94913 1555 aaKnown RBP26.73■■□□□ 1.87
DDX39A-206ENST00000587730 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
DDX39A-206ENST00000587730 WDR62O43379 1518 aa26.73■■□□□ 1.87
DDX39A-206ENST00000587730 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
DDX39A-206ENST00000587730 ITGAEP38570 1179 aa26.69■■□□□ 1.86
DDX39A-206ENST00000587730 FMN1Q68DA7 1419 aa26.65■■□□□ 1.86
DDX39A-206ENST00000587730 POLA1P09884 1462 aaPredicted RBP26.63■■□□□ 1.85
DDX39A-206ENST00000587730 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
DDX39A-206ENST00000587730 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
DDX39A-206ENST00000587730 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
DDX39A-206ENST00000587730 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
DDX39A-206ENST00000587730 RAD54L2Q9Y4B4 1467 aa26.53■■□□□ 1.84
DDX39A-206ENST00000587730 SUPT16HQ9Y5B9 1047 aaKnown RBP26.49■■□□□ 1.83
DDX39A-206ENST00000587730 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
DDX39A-206ENST00000587730 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
DDX39A-206ENST00000587730 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
DDX39A-206ENST00000587730 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
DDX39A-206ENST00000587730 HFM1A2PYH4 1435 aa26.42■■□□□ 1.82
DDX39A-206ENST00000587730 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
DDX39A-206ENST00000587730 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
DDX39A-206ENST00000587730 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
DDX39A-206ENST00000587730 MTUS2Q5JR59 1369 aa26.41■■□□□ 1.82
DDX39A-206ENST00000587730 PPP1R15AO75807 674 aaPredicted RBP26.4■■□□□ 1.82
DDX39A-206ENST00000587730 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
DDX39A-206ENST00000587730 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
DDX39A-206ENST00000587730 CCER2I3L3R5 266 aa26.37■■□□□ 1.81
DDX39A-206ENST00000587730 SIN3AQ96ST3 1273 aa26.37■■□□□ 1.81
DDX39A-206ENST00000587730 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
DDX39A-206ENST00000587730 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
DDX39A-206ENST00000587730 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
DDX39A-206ENST00000587730 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
DDX39A-206ENST00000587730 MYOM3Q5VTT5 1437 aa26.34■■□□□ 1.81
DDX39A-206ENST00000587730 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
DDX39A-206ENST00000587730 TONSLQ96HA7 1378 aa26.32■■□□□ 1.8
DDX39A-206ENST00000587730 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
DDX39A-206ENST00000587730 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
DDX39A-206ENST00000587730 PTPN23Q9H3S7 1636 aa26.31■■□□□ 1.8
DDX39A-206ENST00000587730 NCOA2Q15596 1464 aa26.29■■□□□ 1.8
DDX39A-206ENST00000587730 DDX10Q13206 875 aaKnown RBP26.28■■□□□ 1.8
DDX39A-206ENST00000587730 ANP32CO43423 234 aa26.25■■□□□ 1.79
DDX39A-206ENST00000587730 NAIPQ13075 1403 aa26.23■■□□□ 1.79
DDX39A-206ENST00000587730 AKNAQ7Z591 1439 aa26.23■■□□□ 1.79
DDX39A-206ENST00000587730 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
DDX39A-206ENST00000587730 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
DDX39A-206ENST00000587730 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
DDX39A-206ENST00000587730 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
DDX39A-206ENST00000587730 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
DDX39A-206ENST00000587730 PTPRKQ15262 1439 aa26.17■■□□□ 1.78
DDX39A-206ENST00000587730 HECW1Q76N89 1606 aa26.15■■□□□ 1.78
DDX39A-206ENST00000587730 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.78
DDX39A-206ENST00000587730 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
DDX39A-206ENST00000587730 MIA2Q96PC5 1412 aa26.11■■□□□ 1.77
DDX39A-206ENST00000587730 NEFLP07196 543 aa26.11■■□□□ 1.77
DDX39A-206ENST00000587730 GCC2Q8IWJ2 1684 aa26.1■■□□□ 1.77
DDX39A-206ENST00000587730 TSHZ2Q9NRE2 1034 aa26.05■■□□□ 1.76
DDX39A-206ENST00000587730 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
DDX39A-206ENST00000587730 IQGAP2Q13576 1575 aa26.04■■□□□ 1.76
DDX39A-206ENST00000587730 KDM5BQ9UGL1 1544 aa26.02■■□□□ 1.76
DDX39A-206ENST00000587730 EPRSP07814 1512 aaKnown RBP26■■□□□ 1.75
DDX39A-206ENST00000587730 MAGI3Q5TCQ9 1506 aa25.99■■□□□ 1.75
DDX39A-206ENST00000587730 FKBP8Q14318 412 aa25.98■■□□□ 1.75
DDX39A-206ENST00000587730 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
DDX39A-206ENST00000587730 HIRIP3Q9BW71 556 aaPredicted RBP25.91■■□□□ 1.74
DDX39A-206ENST00000587730 MAGI1Q96QZ7 1491 aaPredicted RBP25.9■■□□□ 1.74
DDX39A-206ENST00000587730 FBLN2P98095 1184 aa25.88■■□□□ 1.73
DDX39A-206ENST00000587730 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
DDX39A-206ENST00000587730 EIF4G2P78344 907 aaKnown RBP eCLIP25.86■■□□□ 1.73
DDX39A-206ENST00000587730 RRP7BPQ9NSQ0 103 aa25.84■■□□□ 1.73
DDX39A-206ENST00000587730 DENND4BO75064 1496 aaPredicted RBP25.83■■□□□ 1.73
DDX39A-206ENST00000587730 TRIM52Q96A61 297 aa25.83■■□□□ 1.73
DDX39A-206ENST00000587730 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
DDX39A-206ENST00000587730 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
DDX39A-206ENST00000587730 MPHOSPH9Q99550 1183 aa25.82■■□□□ 1.72
DDX39A-206ENST00000587730 HSPA5P11021 654 aaKnown RBP25.8■■□□□ 1.72
DDX39A-206ENST00000587730 ERICH6BQ5W0A0 696 aa25.79■■□□□ 1.72
DDX39A-206ENST00000587730 CNTLNQ9NXG0 1405 aa25.79■■□□□ 1.72
DDX39A-206ENST00000587730 KIAA0586Q9BVV6 1533 aa25.79■■□□□ 1.72
DDX39A-206ENST00000587730 CHD1O14646 1710 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms