RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
RANBP3-209ENST00000587411 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
RANBP3-209ENST00000587411 PPP1R15AO75807 674 aaPredicted RBP23.33■■□□□ 1.33
RANBP3-209ENST00000587411 LRRC9Q6ZRR7 1453 aa23.32■■□□□ 1.32
RANBP3-209ENST00000587411 BCANQ96GW7 911 aa23.32■■□□□ 1.32
RANBP3-209ENST00000587411 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
RANBP3-209ENST00000587411 CFTRP13569 1480 aa23.29■■□□□ 1.32
RANBP3-209ENST00000587411 PHLDB1Q86UU1 1377 aa23.25■■□□□ 1.31
RANBP3-209ENST00000587411 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
RANBP3-209ENST00000587411 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
RANBP3-209ENST00000587411 IGF1RP08069 1367 aa23.23■■□□□ 1.31
RANBP3-209ENST00000587411 ANP32CO43423 234 aa23.22■■□□□ 1.31
RANBP3-209ENST00000587411 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
RANBP3-209ENST00000587411 RBM19Q9Y4C8 960 aaKnown RBP23.21■■□□□ 1.31
RANBP3-209ENST00000587411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.18■■□□□ 1.3
RANBP3-209ENST00000587411 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
RANBP3-209ENST00000587411 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
RANBP3-209ENST00000587411 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
RANBP3-209ENST00000587411 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
RANBP3-209ENST00000587411 TRIM52Q96A61 297 aa23.1■■□□□ 1.29
RANBP3-209ENST00000587411 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
RANBP3-209ENST00000587411 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
RANBP3-209ENST00000587411 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
RANBP3-209ENST00000587411 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.283e-8■■■■■ 28.6
RANBP3-209ENST00000587411 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
RANBP3-209ENST00000587411 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
RANBP3-209ENST00000587411 EFCAB5A4FU69 1503 aa23■■□□□ 1.27
RANBP3-209ENST00000587411 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
RANBP3-209ENST00000587411 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
RANBP3-209ENST00000587411 UACAQ9BZF9 1416 aa22.96■■□□□ 1.27
RANBP3-209ENST00000587411 CCDC18Q5T9S5 1454 aa22.95■■□□□ 1.26
RANBP3-209ENST00000587411 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
RANBP3-209ENST00000587411 HFM1A2PYH4 1435 aa22.94■■□□□ 1.26
RANBP3-209ENST00000587411 FHOD3Q2V2M9 1422 aa22.92■■□□□ 1.26
RANBP3-209ENST00000587411 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
RANBP3-209ENST00000587411 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
RANBP3-209ENST00000587411 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
RANBP3-209ENST00000587411 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
RANBP3-209ENST00000587411 MSH5O43196 834 aa22.89■■□□□ 1.26
RANBP3-209ENST00000587411 P3H3Q8IVL6 736 aa22.88■■□□□ 1.25
RANBP3-209ENST00000587411 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
RANBP3-209ENST00000587411 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
RANBP3-209ENST00000587411 FMN1Q68DA7 1419 aa22.85■■□□□ 1.25
RANBP3-209ENST00000587411 KDM5BQ9UGL1 1544 aa22.82■■□□□ 1.24
RANBP3-209ENST00000587411 NAIPQ13075 1403 aa22.8■■□□□ 1.24
RANBP3-209ENST00000587411 PTPRKQ15262 1439 aa22.79■■□□□ 1.24
RANBP3-209ENST00000587411 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
RANBP3-209ENST00000587411 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
RANBP3-209ENST00000587411 MTUS2Q5JR59 1369 aa22.78■■□□□ 1.24
RANBP3-209ENST00000587411 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
RANBP3-209ENST00000587411 CUL7Q14999 1698 aa22.77■■□□□ 1.24
RANBP3-209ENST00000587411 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
RANBP3-209ENST00000587411 CTTNBP2Q8WZ74 1663 aa22.76■■□□□ 1.23
RANBP3-209ENST00000587411 MYT1LQ9UL68 1186 aa22.76■■□□□ 1.23
RANBP3-209ENST00000587411 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
RANBP3-209ENST00000587411 MYOM3Q5VTT5 1437 aa22.74■■□□□ 1.23
RANBP3-209ENST00000587411 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
RANBP3-209ENST00000587411 WASHC2AQ641Q2 1341 aa22.73■■□□□ 1.23
RANBP3-209ENST00000587411 IRX6P78412 446 aaPredicted RBP22.7■■□□□ 1.22
RANBP3-209ENST00000587411 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
RANBP3-209ENST00000587411 THOC2Q8NI27 1593 aaKnown RBP22.7■■□□□ 1.22
RANBP3-209ENST00000587411 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
RANBP3-209ENST00000587411 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
RANBP3-209ENST00000587411 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
RANBP3-209ENST00000587411 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
RANBP3-209ENST00000587411 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
RANBP3-209ENST00000587411 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
RANBP3-209ENST00000587411 HECW1Q76N89 1606 aa22.65■■□□□ 1.22
RANBP3-209ENST00000587411 SAMD9Q5K651 1589 aa22.64■■□□□ 1.22
RANBP3-209ENST00000587411 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
RANBP3-209ENST00000587411 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
RANBP3-209ENST00000587411 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
RANBP3-209ENST00000587411 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
RANBP3-209ENST00000587411 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
RANBP3-209ENST00000587411 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
RANBP3-209ENST00000587411 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
RANBP3-209ENST00000587411 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
RANBP3-209ENST00000587411 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
RANBP3-209ENST00000587411 TCOF1Q13428 1488 aaKnown RBP22.59■■□□□ 1.21
RANBP3-209ENST00000587411 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
RANBP3-209ENST00000587411 LRRIQ1Q96JM4 1722 aa22.58■■□□□ 1.21
RANBP3-209ENST00000587411 PRKRIP1Q9H875 184 aaPredicted RBP22.57■■□□□ 1.2
RANBP3-209ENST00000587411 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
RANBP3-209ENST00000587411 CCDC7Q96M83 1385 aa22.56■■□□□ 1.2
RANBP3-209ENST00000587411 CCDC184Q52MB2 194 aa22.53■■□□□ 1.2
RANBP3-209ENST00000587411 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
RANBP3-209ENST00000587411 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
RANBP3-209ENST00000587411 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
RANBP3-209ENST00000587411 B4GALNT3Q6L9W6 998 aa22.49■■□□□ 1.19
RANBP3-209ENST00000587411 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
RANBP3-209ENST00000587411 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
RANBP3-209ENST00000587411 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
RANBP3-209ENST00000587411 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
RANBP3-209ENST00000587411 C11orf95C9JLR9 678 aaPredicted RBP22.44■■□□□ 1.18
RANBP3-209ENST00000587411 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
RANBP3-209ENST00000587411 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
RANBP3-209ENST00000587411 NOP58Q9Y2X3 529 aaKnown RBP22.43■■□□□ 1.18
RANBP3-209ENST00000587411 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
RANBP3-209ENST00000587411 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
RANBP3-209ENST00000587411 KDM6BO15054 1643 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms