RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 BAZ1BQ9UIG0 1483 aaKnown RBP10.11□□□□□ -0.79
MSI2-219ENST00000584476 NCAPD3P42695 1498 aa10.1□□□□□ -0.79
MSI2-219ENST00000584476 CC2D2AQ9P2K1 1620 aa10.1□□□□□ -0.79
MSI2-219ENST00000584476 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
MSI2-219ENST00000584476 HMGXB3Q12766 1538 aa10.07□□□□□ -0.8
MSI2-219ENST00000584476 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
MSI2-219ENST00000584476 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
MSI2-219ENST00000584476 FARP1Q9Y4F1 1045 aaPredicted RBP10.06□□□□□ -0.8
MSI2-219ENST00000584476 GABBR2O75899 941 aa10.03□□□□□ -0.8
MSI2-219ENST00000584476 CD44P16070 742 aaKnown RBP9.99□□□□□ -0.81
MSI2-219ENST00000584476 CLCN6P51797 869 aa9.96□□□□□ -0.82
MSI2-219ENST00000584476 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
MSI2-219ENST00000584476 CFTRP13569 1480 aa9.85□□□□□ -0.83
MSI2-219ENST00000584476 ZNF579Q8NAF0 562 aaKnown RBP9.85□□□□□ -0.83
MSI2-219ENST00000584476 PROM2Q8N271 834 aa9.84□□□□□ -0.83
MSI2-219ENST00000584476 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
MSI2-219ENST00000584476 CADPSQ9ULU8 1353 aa9.84□□□□□ -0.83
MSI2-219ENST00000584476 ABCC8Q09428 1581 aa9.84□□□□□ -0.83
MSI2-219ENST00000584476 TRIM41Q8WV44 630 aa9.82□□□□□ -0.84
MSI2-219ENST00000584476 NPM1P06748 294 aaKnown RBP eCLIP9.81□□□□□ -0.84
MSI2-219ENST00000584476 NESP48681 1621 aa9.81□□□□□ -0.84
MSI2-219ENST00000584476 POTEIP0CG38 1075 aa9.8□□□□□ -0.84
MSI2-219ENST00000584476 LHX8Q68G74 356 aa9.8□□□□□ -0.84
MSI2-219ENST00000584476 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
MSI2-219ENST00000584476 PAK3O75914 559 aaPredicted RBP9.78□□□□□ -0.84
MSI2-219ENST00000584476 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
MSI2-219ENST00000584476 DCBLD2Q96PD2 775 aa9.76□□□□□ -0.85
MSI2-219ENST00000584476 LAMC3Q9Y6N6 1575 aa9.75□□□□□ -0.85
MSI2-219ENST00000584476 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
MSI2-219ENST00000584476 SYNJ1O43426 1573 aa9.74□□□□□ -0.85
MSI2-219ENST00000584476 FANCD2Q9BXW9 1451 aa9.73□□□□□ -0.85
MSI2-219ENST00000584476 CUX1P39880 1505 aa9.7□□□□□ -0.86
MSI2-219ENST00000584476 GALR2O43603 387 aaPredicted RBP9.69□□□□□ -0.86
MSI2-219ENST00000584476 TOP2BQ02880 1626 aa9.68□□□□□ -0.86
MSI2-219ENST00000584476 PDS5BQ9NTI5 1447 aa9.68□□□□□ -0.86
MSI2-219ENST00000584476 PHF12Q96QT6 1004 aa9.68□□□□□ -0.86
MSI2-219ENST00000584476 FAM9AQ8IZU1 332 aaPredicted RBP9.67□□□□□ -0.86
MSI2-219ENST00000584476 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
MSI2-219ENST00000584476 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
MSI2-219ENST00000584476 SOGA1O94964 1423 aa9.65□□□□□ -0.87
MSI2-219ENST00000584476 KIF21AQ7Z4S6 1674 aa9.64□□□□□ -0.87
MSI2-219ENST00000584476 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
MSI2-219ENST00000584476 RUSC2Q8N2Y8 1516 aa9.62□□□□□ -0.87
MSI2-219ENST00000584476 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
MSI2-219ENST00000584476 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
MSI2-219ENST00000584476 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
MSI2-219ENST00000584476 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
MSI2-219ENST00000584476 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
MSI2-219ENST00000584476 MIER1Q8N108 512 aa9.6□□□□□ -0.87
MSI2-219ENST00000584476 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
MSI2-219ENST00000584476 TSPYL2Q9H2G4 693 aaPredicted RBP9.57□□□□□ -0.88
MSI2-219ENST00000584476 CCDC61Q9Y6R9 512 aa9.57□□□□□ -0.88
MSI2-219ENST00000584476 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
MSI2-219ENST00000584476 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
MSI2-219ENST00000584476 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
MSI2-219ENST00000584476 MS4A3Q96HJ5 214 aa9.56□□□□□ -0.88
MSI2-219ENST00000584476 EEA1Q15075 1411 aa9.56□□□□□ -0.88
MSI2-219ENST00000584476 WDR62O43379 1518 aa9.53□□□□□ -0.88
MSI2-219ENST00000584476 ASTLQ6HA08 431 aaPredicted RBP9.53□□□□□ -0.88
MSI2-219ENST00000584476 CUX2O14529 1486 aa9.53□□□□□ -0.88
MSI2-219ENST00000584476 KIF27Q86VH2 1401 aa9.52□□□□□ -0.89
MSI2-219ENST00000584476 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
MSI2-219ENST00000584476 THOC2Q8NI27 1593 aaKnown RBP9.52□□□□□ -0.89
MSI2-219ENST00000584476 FKBP8Q14318 412 aa9.51□□□□□ -0.89
MSI2-219ENST00000584476 PLCD3Q8N3E9 789 aa9.51□□□□□ -0.89
MSI2-219ENST00000584476 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
MSI2-219ENST00000584476 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
MSI2-219ENST00000584476 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
MSI2-219ENST00000584476 RASEFQ8IZ41 740 aa9.5□□□□□ -0.89
MSI2-219ENST00000584476 ZBTB47Q9UFB7 747 aaPredicted RBP9.5□□□□□ -0.89
MSI2-219ENST00000584476 TARBP1Q13395 1621 aaKnown RBP9.48□□□□□ -0.89
MSI2-219ENST00000584476 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
MSI2-219ENST00000584476 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
MSI2-219ENST00000584476 C7P10643 843 aa9.47□□□□□ -0.89
MSI2-219ENST00000584476 SLC39A7Q92504 469 aa9.47□□□□□ -0.89
MSI2-219ENST00000584476 IGF1RP08069 1367 aa9.47□□□□□ -0.89
MSI2-219ENST00000584476 TDRD9Q8NDG6 1382 aaKnown RBP9.47□□□□□ -0.89
MSI2-219ENST00000584476 OTUD5Q96G74 571 aa9.46□□□□□ -0.9
MSI2-219ENST00000584476 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
MSI2-219ENST00000584476 PRXQ9BXM0 1461 aa9.45□□□□□ -0.9
MSI2-219ENST00000584476 KIF21BO75037 1637 aa9.45□□□□□ -0.9
MSI2-219ENST00000584476 MAP3K13O43283 966 aa9.44□□□□□ -0.9
MSI2-219ENST00000584476 GOLGA3Q08378 1498 aa9.44□□□□□ -0.9
MSI2-219ENST00000584476 IFT140Q96RY7 1462 aa9.44□□□□□ -0.9
MSI2-219ENST00000584476 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
MSI2-219ENST00000584476 ABCA5Q8WWZ7 1642 aa9.43□□□□□ -0.9
MSI2-219ENST00000584476 ZNF608Q9ULD9 1512 aaPredicted RBP9.42□□□□□ -0.9
MSI2-219ENST00000584476 AQRO60306 1485 aaKnown RBP eCLIP9.42□□□□□ -0.95e-7■■■■■ 28.7
MSI2-219ENST00000584476 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
MSI2-219ENST00000584476 UBTFP17480 764 aaKnown RBP9.42□□□□□ -0.9
MSI2-219ENST00000584476 NUBP1P53384 320 aa9.42□□□□□ -0.9
MSI2-219ENST00000584476 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
MSI2-219ENST00000584476 SGIP1Q9BQI5 828 aa9.41□□□□□ -0.9
MSI2-219ENST00000584476 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
MSI2-219ENST00000584476 TNIKQ9UKE5 1360 aa9.4□□□□□ -0.9
MSI2-219ENST00000584476 TIE1P35590 1138 aa9.4□□□□□ -0.9
MSI2-219ENST00000584476 ERICH3Q5RHP9 1530 aa9.4□□□□□ -0.91
MSI2-219ENST00000584476 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
MSI2-219ENST00000584476 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
MSI2-219ENST00000584476 TRPC6Q9Y210 931 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms