RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
ERBB2-218ENST00000584450 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
ERBB2-218ENST00000584450 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
ERBB2-218ENST00000584450 KCNH8Q96L42 1107 aa16.6■□□□□ 0.25
ERBB2-218ENST00000584450 FOXD1Q16676 465 aa16.59■□□□□ 0.25
ERBB2-218ENST00000584450 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
ERBB2-218ENST00000584450 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
ERBB2-218ENST00000584450 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
ERBB2-218ENST00000584450 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
ERBB2-218ENST00000584450 IGF1RP08069 1367 aa16.55■□□□□ 0.24
ERBB2-218ENST00000584450 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-218ENST00000584450 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
ERBB2-218ENST00000584450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.54■□□□□ 0.24
ERBB2-218ENST00000584450 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
ERBB2-218ENST00000584450 KIF21BO75037 1637 aa16.53■□□□□ 0.24
ERBB2-218ENST00000584450 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
ERBB2-218ENST00000584450 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
ERBB2-218ENST00000584450 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
ERBB2-218ENST00000584450 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
ERBB2-218ENST00000584450 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
ERBB2-218ENST00000584450 EIF4G2P78344 907 aaKnown RBP eCLIP16.47■□□□□ 0.23
ERBB2-218ENST00000584450 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
ERBB2-218ENST00000584450 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-218ENST00000584450 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
ERBB2-218ENST00000584450 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
ERBB2-218ENST00000584450 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
ERBB2-218ENST00000584450 FGD5Q6ZNL6 1462 aa16.44■□□□□ 0.22
ERBB2-218ENST00000584450 FANCD2Q9BXW9 1451 aa16.43■□□□□ 0.22
ERBB2-218ENST00000584450 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
ERBB2-218ENST00000584450 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
ERBB2-218ENST00000584450 RGL3Q3MIN7 710 aa16.43■□□□□ 0.22
ERBB2-218ENST00000584450 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
ERBB2-218ENST00000584450 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
ERBB2-218ENST00000584450 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
ERBB2-218ENST00000584450 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
ERBB2-218ENST00000584450 CUX1P39880 1505 aa16.37■□□□□ 0.21
ERBB2-218ENST00000584450 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
ERBB2-218ENST00000584450 PRXQ9BXM0 1461 aa16.36■□□□□ 0.21
ERBB2-218ENST00000584450 NESP48681 1621 aa16.36■□□□□ 0.21
ERBB2-218ENST00000584450 SENP3Q9H4L4 574 aaPredicted RBP16.36■□□□□ 0.21
ERBB2-218ENST00000584450 MYT1Q01538 1121 aa16.34■□□□□ 0.21
ERBB2-218ENST00000584450 CFTRP13569 1480 aa16.34■□□□□ 0.21
ERBB2-218ENST00000584450 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
ERBB2-218ENST00000584450 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
ERBB2-218ENST00000584450 MPHOSPH9Q99550 1183 aa16.3■□□□□ 0.2
ERBB2-218ENST00000584450 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
ERBB2-218ENST00000584450 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
ERBB2-218ENST00000584450 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
ERBB2-218ENST00000584450 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
ERBB2-218ENST00000584450 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
ERBB2-218ENST00000584450 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
ERBB2-218ENST00000584450 ZNF644Q9H582 1327 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-218ENST00000584450 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
ERBB2-218ENST00000584450 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
ERBB2-218ENST00000584450 PKD2Q13563 968 aa16.22■□□□□ 0.19
ERBB2-218ENST00000584450 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
ERBB2-218ENST00000584450 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
ERBB2-218ENST00000584450 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
ERBB2-218ENST00000584450 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
ERBB2-218ENST00000584450 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.188e-7■■■■□ 26
ERBB2-218ENST00000584450 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
ERBB2-218ENST00000584450 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
ERBB2-218ENST00000584450 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
ERBB2-218ENST00000584450 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
ERBB2-218ENST00000584450 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-218ENST00000584450 HNRNPMP52272 730 aaKnown RBP eCLIP16.15■□□□□ 0.18
ERBB2-218ENST00000584450 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
ERBB2-218ENST00000584450 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
ERBB2-218ENST00000584450 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
ERBB2-218ENST00000584450 FGD6Q6ZV73 1430 aa16.13■□□□□ 0.17
ERBB2-218ENST00000584450 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
ERBB2-218ENST00000584450 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
ERBB2-218ENST00000584450 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
ERBB2-218ENST00000584450 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
ERBB2-218ENST00000584450 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
ERBB2-218ENST00000584450 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
ERBB2-218ENST00000584450 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
ERBB2-218ENST00000584450 NUP155O75694 1391 aa16.08■□□□□ 0.16
ERBB2-218ENST00000584450 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
ERBB2-218ENST00000584450 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
ERBB2-218ENST00000584450 RTL5Q5HYW3 569 aaPredicted RBP16.04■□□□□ 0.16
ERBB2-218ENST00000584450 NBR1Q14596 966 aa16.03■□□□□ 0.16
ERBB2-218ENST00000584450 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
ERBB2-218ENST00000584450 MYOM3Q5VTT5 1437 aa16.02■□□□□ 0.16
ERBB2-218ENST00000584450 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
ERBB2-218ENST00000584450 TIAM1Q13009 1591 aa16.02■□□□□ 0.15
ERBB2-218ENST00000584450 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.15
ERBB2-218ENST00000584450 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
ERBB2-218ENST00000584450 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
ERBB2-218ENST00000584450 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
ERBB2-218ENST00000584450 ANP32AP39687 249 aaKnown RBP15.99■□□□□ 0.15
ERBB2-218ENST00000584450 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.151e-5■■■■□ 24.6
ERBB2-218ENST00000584450 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
ERBB2-218ENST00000584450 ST20-MTHFSA0A0A6YYL1 179 aa15.97■□□□□ 0.15
ERBB2-218ENST00000584450 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
ERBB2-218ENST00000584450 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-218ENST00000584450 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
ERBB2-218ENST00000584450 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-218ENST00000584450 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
ERBB2-218ENST00000584450 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms