RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
CSNK1D-222ENST00000584377 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
CSNK1D-222ENST00000584377 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
CSNK1D-222ENST00000584377 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
CSNK1D-222ENST00000584377 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
CSNK1D-222ENST00000584377 CUL7Q14999 1698 aa19.44■□□□□ 0.7
CSNK1D-222ENST00000584377 URB2Q14146 1524 aaKnown RBP19.44■□□□□ 0.7
CSNK1D-222ENST00000584377 ITGAEP38570 1179 aa19.43■□□□□ 0.7
CSNK1D-222ENST00000584377 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-222ENST00000584377 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
CSNK1D-222ENST00000584377 EFCAB5A4FU69 1503 aa19.39■□□□□ 0.69
CSNK1D-222ENST00000584377 PDS5BQ9NTI5 1447 aa19.38■□□□□ 0.69
CSNK1D-222ENST00000584377 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-222ENST00000584377 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
CSNK1D-222ENST00000584377 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
CSNK1D-222ENST00000584377 CFAP43Q8NDM7 1665 aa19.36■□□□□ 0.69
CSNK1D-222ENST00000584377 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
CSNK1D-222ENST00000584377 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
CSNK1D-222ENST00000584377 CTTNBP2Q8WZ74 1663 aa19.34■□□□□ 0.69
CSNK1D-222ENST00000584377 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
CSNK1D-222ENST00000584377 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
CSNK1D-222ENST00000584377 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
CSNK1D-222ENST00000584377 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
CSNK1D-222ENST00000584377 AQRO60306 1485 aaKnown RBP eCLIP19.31■□□□□ 0.681e-7■■■■■ 39.4
CSNK1D-222ENST00000584377 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
CSNK1D-222ENST00000584377 MIER1Q8N108 512 aa19.31■□□□□ 0.68
CSNK1D-222ENST00000584377 FAM50AQ14320 339 aaKnown RBP19.29■□□□□ 0.68
CSNK1D-222ENST00000584377 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
CSNK1D-222ENST00000584377 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
CSNK1D-222ENST00000584377 KIF21AQ7Z4S6 1674 aa19.26■□□□□ 0.67
CSNK1D-222ENST00000584377 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
CSNK1D-222ENST00000584377 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-222ENST00000584377 MAPKBP1O60336 1514 aa19.2■□□□□ 0.66
CSNK1D-222ENST00000584377 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
CSNK1D-222ENST00000584377 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-222ENST00000584377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.665e-16■■■■■ 33.2
CSNK1D-222ENST00000584377 MTUS2Q5JR59 1369 aa19.15■□□□□ 0.66
CSNK1D-222ENST00000584377 FGD6Q6ZV73 1430 aa19.13■□□□□ 0.65
CSNK1D-222ENST00000584377 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
CSNK1D-222ENST00000584377 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
CSNK1D-222ENST00000584377 MRC2Q9UBG0 1479 aa19.08■□□□□ 0.64
CSNK1D-222ENST00000584377 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
CSNK1D-222ENST00000584377 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
CSNK1D-222ENST00000584377 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
CSNK1D-222ENST00000584377 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
CSNK1D-222ENST00000584377 MYOM3Q5VTT5 1437 aa19.03■□□□□ 0.64
CSNK1D-222ENST00000584377 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
CSNK1D-222ENST00000584377 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
CSNK1D-222ENST00000584377 IQGAP2Q13576 1575 aa19.01■□□□□ 0.63
CSNK1D-222ENST00000584377 SUPT6HQ7KZ85 1726 aaKnown RBP19.01■□□□□ 0.63
CSNK1D-222ENST00000584377 BCL11AQ9H165 835 aa19■□□□□ 0.63
CSNK1D-222ENST00000584377 CCDC18Q5T9S5 1454 aa19■□□□□ 0.63
CSNK1D-222ENST00000584377 TIMELESSQ9UNS1 1208 aa18.99■□□□□ 0.63
CSNK1D-222ENST00000584377 PTPRKQ15262 1439 aa18.99■□□□□ 0.63
CSNK1D-222ENST00000584377 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
CSNK1D-222ENST00000584377 MAGI3Q5TCQ9 1506 aa18.96■□□□□ 0.63
CSNK1D-222ENST00000584377 UGGT2Q9NYU1 1516 aa18.96■□□□□ 0.63
CSNK1D-222ENST00000584377 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
CSNK1D-222ENST00000584377 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
CSNK1D-222ENST00000584377 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
CSNK1D-222ENST00000584377 ZNF608Q9ULD9 1512 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-222ENST00000584377 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
CSNK1D-222ENST00000584377 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
CSNK1D-222ENST00000584377 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
CSNK1D-222ENST00000584377 NAIPQ13075 1403 aa18.92■□□□□ 0.62
CSNK1D-222ENST00000584377 WDR62O43379 1518 aa18.92■□□□□ 0.62
CSNK1D-222ENST00000584377 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-222ENST00000584377 CDK13Q14004 1512 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-222ENST00000584377 ANP32EQ9BTT0 268 aa18.87■□□□□ 0.61
CSNK1D-222ENST00000584377 TCOF1Q13428 1488 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-222ENST00000584377 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
CSNK1D-222ENST00000584377 KIAA0586Q9BVV6 1533 aa18.85■□□□□ 0.61
CSNK1D-222ENST00000584377 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
CSNK1D-222ENST00000584377 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
CSNK1D-222ENST00000584377 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
CSNK1D-222ENST00000584377 MIA2Q96PC5 1412 aa18.82■□□□□ 0.6
CSNK1D-222ENST00000584377 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
CSNK1D-222ENST00000584377 DISP1Q96F81 1524 aa18.81■□□□□ 0.6
CSNK1D-222ENST00000584377 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-222ENST00000584377 KIAA0556O60303 1618 aa18.8■□□□□ 0.6
CSNK1D-222ENST00000584377 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-222ENST00000584377 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
CSNK1D-222ENST00000584377 AKNAQ7Z591 1439 aa18.78■□□□□ 0.6
CSNK1D-222ENST00000584377 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-222ENST00000584377 GCC2Q8IWJ2 1684 aa18.76■□□□□ 0.59
CSNK1D-222ENST00000584377 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-222ENST00000584377 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
CSNK1D-222ENST00000584377 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-222ENST00000584377 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
CSNK1D-222ENST00000584377 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-222ENST00000584377 RAPGEF6Q8TEU7 1601 aa18.71■□□□□ 0.59
CSNK1D-222ENST00000584377 CDK11AQ9UQ88 783 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-222ENST00000584377 TSHZ2Q9NRE2 1034 aa18.7■□□□□ 0.58
CSNK1D-222ENST00000584377 SUPT16HQ9Y5B9 1047 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-222ENST00000584377 KDM6BO15054 1643 aa18.69■□□□□ 0.58
CSNK1D-222ENST00000584377 SYNJ2O15056 1496 aa18.68■□□□□ 0.58
CSNK1D-222ENST00000584377 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
CSNK1D-222ENST00000584377 DAPK1P53355 1430 aa18.67■□□□□ 0.58
CSNK1D-222ENST00000584377 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
CSNK1D-222ENST00000584377 FBLN2P98095 1184 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms