RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
TRAPPC8-210ENST00000582513 CUX2O14529 1486 aa22.11■■□□□ 1.13
TRAPPC8-210ENST00000582513 ARHGAP35Q9NRY4 1499 aa22.11■■□□□ 1.13
TRAPPC8-210ENST00000582513 PKNOX2Q96KN3 472 aa22.06■■□□□ 1.12
TRAPPC8-210ENST00000582513 IGF1RP08069 1367 aa22.05■■□□□ 1.12
TRAPPC8-210ENST00000582513 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
TRAPPC8-210ENST00000582513 P3H3Q8IVL6 736 aa22.03■■□□□ 1.12
TRAPPC8-210ENST00000582513 PODXL2Q9NZ53 605 aa22.02■■□□□ 1.12
TRAPPC8-210ENST00000582513 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
TRAPPC8-210ENST00000582513 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
TRAPPC8-210ENST00000582513 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
TRAPPC8-210ENST00000582513 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
TRAPPC8-210ENST00000582513 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
TRAPPC8-210ENST00000582513 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
TRAPPC8-210ENST00000582513 CLSPNQ9HAW4 1339 aa21.95■■□□□ 1.1
TRAPPC8-210ENST00000582513 DAXXQ9UER7 740 aaPredicted RBP21.93■■□□□ 1.1
TRAPPC8-210ENST00000582513 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
TRAPPC8-210ENST00000582513 MSH5O43196 834 aa21.87■■□□□ 1.09
TRAPPC8-210ENST00000582513 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
TRAPPC8-210ENST00000582513 NBR1Q14596 966 aa21.86■■□□□ 1.09
TRAPPC8-210ENST00000582513 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
TRAPPC8-210ENST00000582513 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
TRAPPC8-210ENST00000582513 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.08
TRAPPC8-210ENST00000582513 FANCD2Q9BXW9 1451 aa21.82■■□□□ 1.08
TRAPPC8-210ENST00000582513 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
TRAPPC8-210ENST00000582513 PHLDB1Q86UU1 1377 aa21.81■■□□□ 1.08
TRAPPC8-210ENST00000582513 IL27Q8NEV9 243 aa21.78■■□□□ 1.08
TRAPPC8-210ENST00000582513 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
TRAPPC8-210ENST00000582513 FKBP8Q14318 412 aa21.77■■□□□ 1.08
TRAPPC8-210ENST00000582513 NESP48681 1621 aa21.77■■□□□ 1.08
TRAPPC8-210ENST00000582513 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.07
TRAPPC8-210ENST00000582513 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
TRAPPC8-210ENST00000582513 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
TRAPPC8-210ENST00000582513 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.07
TRAPPC8-210ENST00000582513 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
TRAPPC8-210ENST00000582513 PCF11O94913 1555 aaKnown RBP21.7■■□□□ 1.06
TRAPPC8-210ENST00000582513 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
TRAPPC8-210ENST00000582513 MAPKBP1O60336 1514 aa21.69■■□□□ 1.06
TRAPPC8-210ENST00000582513 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC8-210ENST00000582513 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
TRAPPC8-210ENST00000582513 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
TRAPPC8-210ENST00000582513 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
TRAPPC8-210ENST00000582513 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
TRAPPC8-210ENST00000582513 HIRIP3Q9BW71 556 aaPredicted RBP21.62■■□□□ 1.05
TRAPPC8-210ENST00000582513 ABCA10Q8WWZ4 1543 aa21.61■■□□□ 1.05
TRAPPC8-210ENST00000582513 NEFLP07196 543 aa21.61■■□□□ 1.05
TRAPPC8-210ENST00000582513 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
TRAPPC8-210ENST00000582513 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
TRAPPC8-210ENST00000582513 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
TRAPPC8-210ENST00000582513 CFAP43Q8NDM7 1665 aa21.56■■□□□ 1.04
TRAPPC8-210ENST00000582513 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
TRAPPC8-210ENST00000582513 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
TRAPPC8-210ENST00000582513 CASKIN1Q8WXD9 1431 aa21.52■■□□□ 1.04
TRAPPC8-210ENST00000582513 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC8-210ENST00000582513 FYCO1Q9BQS8 1478 aa21.52■■□□□ 1.03
TRAPPC8-210ENST00000582513 A0A0U1RQG5 324 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC8-210ENST00000582513 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
TRAPPC8-210ENST00000582513 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
TRAPPC8-210ENST00000582513 EFCAB5A4FU69 1503 aa21.47■■□□□ 1.03
TRAPPC8-210ENST00000582513 CUL7Q14999 1698 aa21.44■■□□□ 1.02
TRAPPC8-210ENST00000582513 FMN1Q68DA7 1419 aa21.44■■□□□ 1.02
TRAPPC8-210ENST00000582513 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
TRAPPC8-210ENST00000582513 CTTNBP2Q8WZ74 1663 aa21.44■■□□□ 1.02
TRAPPC8-210ENST00000582513 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
TRAPPC8-210ENST00000582513 ARID3CA6NKF2 412 aa21.41■■□□□ 1.02
TRAPPC8-210ENST00000582513 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC8-210ENST00000582513 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
TRAPPC8-210ENST00000582513 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRAPPC8-210ENST00000582513 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
TRAPPC8-210ENST00000582513 GAPVD1Q14C86 1478 aa21.4■■□□□ 1.02
TRAPPC8-210ENST00000582513 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
TRAPPC8-210ENST00000582513 CDK11AQ9UQ88 783 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC8-210ENST00000582513 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
TRAPPC8-210ENST00000582513 GLIPR1L2Q4G1C9 344 aa21.35■■□□□ 1.01
TRAPPC8-210ENST00000582513 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
TRAPPC8-210ENST00000582513 RRP7BPQ9NSQ0 103 aa21.33■■□□□ 1.01
TRAPPC8-210ENST00000582513 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
TRAPPC8-210ENST00000582513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.33■■□□□ 1
TRAPPC8-210ENST00000582513 NCOA2Q15596 1464 aa21.33■■□□□ 1
TRAPPC8-210ENST00000582513 ZMYND15Q9H091 742 aa21.31■■□□□ 1
TRAPPC8-210ENST00000582513 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
TRAPPC8-210ENST00000582513 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
TRAPPC8-210ENST00000582513 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
TRAPPC8-210ENST00000582513 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
TRAPPC8-210ENST00000582513 MYOM3Q5VTT5 1437 aa21.28■■□□□ 1
TRAPPC8-210ENST00000582513 GRIN2BQ13224 1484 aa21.27■■□□□ 1
TRAPPC8-210ENST00000582513 SAMD9Q5K651 1589 aa21.27■■□□□ 1
TRAPPC8-210ENST00000582513 TRIM52Q96A61 297 aa21.27■■□□□ 1
TRAPPC8-210ENST00000582513 HFM1A2PYH4 1435 aa21.27■□□□□ 0.99
TRAPPC8-210ENST00000582513 NAIPQ13075 1403 aa21.26■□□□□ 0.99
TRAPPC8-210ENST00000582513 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
TRAPPC8-210ENST00000582513 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
TRAPPC8-210ENST00000582513 ANP32CO43423 234 aa21.24■□□□□ 0.99
TRAPPC8-210ENST00000582513 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
TRAPPC8-210ENST00000582513 MAGI3Q5TCQ9 1506 aa21.22■□□□□ 0.99
TRAPPC8-210ENST00000582513 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC8-210ENST00000582513 SUPT6HQ7KZ85 1726 aaKnown RBP21.19■□□□□ 0.98
TRAPPC8-210ENST00000582513 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
TRAPPC8-210ENST00000582513 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC8-210ENST00000582513 FOXD1Q16676 465 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms