RNA–Protein interactions for RNA: ENST00000582402.1

CDC6-205, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-205ENST00000582402 SHROOM2Q13796 1616 aa8.42□□□□□ -1.06
CDC6-205ENST00000582402 PCF11O94913 1555 aaKnown RBP8.41□□□□□ -1.06
CDC6-205ENST00000582402 ABCC8Q09428 1581 aa8.41□□□□□ -1.06
CDC6-205ENST00000582402 GRIN2BQ13224 1484 aa8.41□□□□□ -1.06
CDC6-205ENST00000582402 SOGA1O94964 1423 aa8.4□□□□□ -1.06
CDC6-205ENST00000582402 NPM1P06748 294 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDC6-205ENST00000582402 HSPA2P54652 639 aa8.39□□□□□ -1.07
CDC6-205ENST00000582402 WDR97A6NE52 1622 aa8.36□□□□□ -1.07
CDC6-205ENST00000582402 PTPRMP28827 1452 aa8.35□□□□□ -1.07
CDC6-205ENST00000582402 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
CDC6-205ENST00000582402 GRIN2AQ12879 1464 aa8.34□□□□□ -1.07
CDC6-205ENST00000582402 PRG4Q92954 1404 aaPredicted RBP8.34□□□□□ -1.07
CDC6-205ENST00000582402 PLPPR3Q6T4P5 718 aa8.33□□□□□ -1.08
CDC6-205ENST00000582402 TOP2AP11388 1531 aaKnown RBP8.33□□□□□ -1.08
CDC6-205ENST00000582402 MED1Q15648 1581 aaPredicted RBP8.3□□□□□ -1.08
CDC6-205ENST00000582402 MADDQ8WXG6 1647 aa8.29□□□□□ -1.08
CDC6-205ENST00000582402 ADAMTSL3P82987 1691 aa8.29□□□□□ -1.08
CDC6-205ENST00000582402 NUP160Q12769 1436 aa8.29□□□□□ -1.08
CDC6-205ENST00000582402 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
CDC6-205ENST00000582402 CUL7Q14999 1698 aa8.27□□□□□ -1.08
CDC6-205ENST00000582402 RIMS1Q86UR5 1692 aaKnown RBP8.27□□□□□ -1.08
CDC6-205ENST00000582402 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
CDC6-205ENST00000582402 MAP3K4Q9Y6R4 1608 aa8.27□□□□□ -1.09
CDC6-205ENST00000582402 TTBK1Q5TCY1 1321 aaPredicted RBP8.27□□□□□ -1.09
CDC6-205ENST00000582402 CCDC88BA6NC98 1476 aa8.25□□□□□ -1.09
CDC6-205ENST00000582402 GLI2P10070 1586 aa8.24□□□□□ -1.09
CDC6-205ENST00000582402 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
CDC6-205ENST00000582402 BCORL1Q5H9F3 1711 aa8.21□□□□□ -1.09
CDC6-205ENST00000582402 CUX1P39880 1505 aa8.21□□□□□ -1.1
CDC6-205ENST00000582402 TEX14Q8IWB6 1497 aa8.2□□□□□ -1.1
CDC6-205ENST00000582402 RUSC2Q8N2Y8 1516 aa8.2□□□□□ -1.1
CDC6-205ENST00000582402 JPH4Q96JJ6 628 aa8.19□□□□□ -1.1
CDC6-205ENST00000582402 ABCC2Q92887 1545 aa8.19□□□□□ -1.1
CDC6-205ENST00000582402 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
CDC6-205ENST00000582402 PHF23Q9BUL5 403 aaPredicted RBP8.18□□□□□ -1.1
CDC6-205ENST00000582402 EPRSP07814 1512 aaKnown RBP8.16□□□□□ -1.1
CDC6-205ENST00000582402 SETD1AO15047 1707 aaKnown RBP8.15□□□□□ -1.1
CDC6-205ENST00000582402 PLB1Q6P1J6 1458 aa8.14□□□□□ -1.11
CDC6-205ENST00000582402 ARID4BQ4LE39 1312 aaPredicted RBP8.13□□□□□ -1.11
CDC6-205ENST00000582402 LTBP4Q8N2S1 1624 aa8.13□□□□□ -1.11
CDC6-205ENST00000582402 CFAP43Q8NDM7 1665 aa8.12□□□□□ -1.11
CDC6-205ENST00000582402 SCAF1Q9H7N4 1312 aaKnown RBP8.11□□□□□ -1.11
CDC6-205ENST00000582402 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
CDC6-205ENST00000582402 ABCA10Q8WWZ4 1543 aa8.11□□□□□ -1.11
CDC6-205ENST00000582402 FHAD1B1AJZ9 1412 aa8.11□□□□□ -1.11
CDC6-205ENST00000582402 KIAA0586Q9BVV6 1533 aa8.1□□□□□ -1.11
CDC6-205ENST00000582402 SENP3Q9H4L4 574 aaPredicted RBP8.1□□□□□ -1.11
CDC6-205ENST00000582402 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
CDC6-205ENST00000582402 PREX1Q8TCU6 1659 aa8.09□□□□□ -1.11
CDC6-205ENST00000582402 HSPA1LP34931 641 aa8.09□□□□□ -1.11
CDC6-205ENST00000582402 YEATS2Q9ULM3 1422 aa8.06□□□□□ -1.12
CDC6-205ENST00000582402 FER1L4A9Z1Z3 1794 aa8.06□□□□□ -1.12
CDC6-205ENST00000582402 SIGLEC1Q9BZZ2 1709 aa8.06□□□□□ -1.12
CDC6-205ENST00000582402 PTPRGP23470 1445 aa8.04□□□□□ -1.12
CDC6-205ENST00000582402 PIP4K2BP78356 416 aa8.04□□□□□ -1.12
CDC6-205ENST00000582402 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
CDC6-205ENST00000582402 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
CDC6-205ENST00000582402 FRMPD1Q5SYB0 1578 aa8.01□□□□□ -1.13
CDC6-205ENST00000582402 MAGI3Q5TCQ9 1506 aa8□□□□□ -1.13
CDC6-205ENST00000582402 RAPGEF3O95398 923 aa8□□□□□ -1.13
CDC6-205ENST00000582402 MLECQ14165 292 aa8□□□□□ -1.13
CDC6-205ENST00000582402 DMRT2Q9Y5R5 561 aa8□□□□□ -1.13
CDC6-205ENST00000582402 PTPRTO14522 1441 aa7.99□□□□□ -1.13
CDC6-205ENST00000582402 TTC37Q6PGP7 1564 aa7.99□□□□□ -1.13
CDC6-205ENST00000582402 KCNH8Q96L42 1107 aa7.99□□□□□ -1.13
CDC6-205ENST00000582402 RGS17Q9UGC6 210 aaPredicted RBP7.99□□□□□ -1.13
CDC6-205ENST00000582402 WDR7Q9Y4E6 1490 aa7.99□□□□□ -1.13
CDC6-205ENST00000582402 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
CDC6-205ENST00000582402 CEBPAP49715 358 aaPredicted RBP7.98□□□□□ -1.13
CDC6-205ENST00000582402 ZNF335Q9H4Z2 1342 aaPredicted RBP7.98□□□□□ -1.13
CDC6-205ENST00000582402 ARHGEF40Q8TER5 1519 aa7.97□□□□□ -1.13
CDC6-205ENST00000582402 KDM5BQ9UGL1 1544 aa7.97□□□□□ -1.13
CDC6-205ENST00000582402 UHRF1BP1LA0JNW5 1464 aa7.96□□□□□ -1.13
CDC6-205ENST00000582402 ARAP3Q8WWN8 1544 aa7.96□□□□□ -1.14
CDC6-205ENST00000582402 UACAQ9BZF9 1416 aa7.95□□□□□ -1.14
CDC6-205ENST00000582402 TNIKQ9UKE5 1360 aa7.95□□□□□ -1.14
CDC6-205ENST00000582402 UHRF1BP1Q6BDS2 1440 aa7.94□□□□□ -1.14
CDC6-205ENST00000582402 POTEAQ6S8J7 498 aa7.93□□□□□ -1.14
CDC6-205ENST00000582402 KIAA0556O60303 1618 aa7.92□□□□□ -1.14
CDC6-205ENST00000582402 FANCAO15360 1455 aa7.91□□□□□ -1.14
CDC6-205ENST00000582402 SRCAPQ6ZRS2 3230 aa7.91□□□□□ -1.14
CDC6-205ENST00000582402 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
CDC6-205ENST00000582402 CARMIL2Q6F5E8 1435 aa7.88□□□□□ -1.15
CDC6-205ENST00000582402 RICTORQ6R327 1708 aa7.88□□□□□ -1.15
CDC6-205ENST00000582402 POGZQ7Z3K3 1410 aa7.87□□□□□ -1.15
CDC6-205ENST00000582402 UPF1Q92900 1129 aaKnown RBP eCLIP7.87□□□□□ -1.15
CDC6-205ENST00000582402 CAMSAP1Q5T5Y3 1602 aa7.87□□□□□ -1.15
CDC6-205ENST00000582402 NCOA1Q15788 1441 aa7.86□□□□□ -1.15
CDC6-205ENST00000582402 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
CDC6-205ENST00000582402 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
CDC6-205ENST00000582402 C3P01024 1663 aa7.86□□□□□ -1.15
CDC6-205ENST00000582402 NCKAP5LQ9HCH0 1330 aa7.85□□□□□ -1.15
CDC6-205ENST00000582402 ARID3CA6NKF2 412 aa7.85□□□□□ -1.15
CDC6-205ENST00000582402 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
CDC6-205ENST00000582402 SUPT6HQ7KZ85 1726 aaKnown RBP7.84□□□□□ -1.15
CDC6-205ENST00000582402 ZFYVE16Q7Z3T8 1539 aa7.83□□□□□ -1.16
CDC6-205ENST00000582402 DISP1Q96F81 1524 aa7.83□□□□□ -1.16
CDC6-205ENST00000582402 ARHGEF12Q9NZN5 1544 aa7.83□□□□□ -1.16
CDC6-205ENST00000582402 IQGAP2Q13576 1575 aa7.83□□□□□ -1.16
CDC6-205ENST00000582402 TOM1O60784 492 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms