RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
RIOK3-204ENST00000581220 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
RIOK3-204ENST00000581220 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
RIOK3-204ENST00000581220 RRBP1Q9P2E9 1410 aaKnown RBP12.3□□□□□ -0.44
RIOK3-204ENST00000581220 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
RIOK3-204ENST00000581220 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
RIOK3-204ENST00000581220 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
RIOK3-204ENST00000581220 ITGAEP38570 1179 aa12.22□□□□□ -0.45
RIOK3-204ENST00000581220 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
RIOK3-204ENST00000581220 CUX1P39880 1505 aa12.18□□□□□ -0.46
RIOK3-204ENST00000581220 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
RIOK3-204ENST00000581220 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
RIOK3-204ENST00000581220 SOCS7O14512 581 aa12.18□□□□□ -0.46
RIOK3-204ENST00000581220 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
RIOK3-204ENST00000581220 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
RIOK3-204ENST00000581220 SETD5Q9C0A6 1442 aa12.13□□□□□ -0.47
RIOK3-204ENST00000581220 MAPKBP1O60336 1514 aa12.13□□□□□ -0.47
RIOK3-204ENST00000581220 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
RIOK3-204ENST00000581220 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
RIOK3-204ENST00000581220 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
RIOK3-204ENST00000581220 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
RIOK3-204ENST00000581220 IFT140Q96RY7 1462 aa12.12□□□□□ -0.47
RIOK3-204ENST00000581220 TIAM1Q13009 1591 aa12.11□□□□□ -0.47
RIOK3-204ENST00000581220 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
RIOK3-204ENST00000581220 FKBP8Q14318 412 aa12.08□□□□□ -0.47
RIOK3-204ENST00000581220 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.47
RIOK3-204ENST00000581220 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
RIOK3-204ENST00000581220 CFTRP13569 1480 aa12.08□□□□□ -0.48
RIOK3-204ENST00000581220 NEFLP07196 543 aa12.08□□□□□ -0.48
RIOK3-204ENST00000581220 BCANQ96GW7 911 aa12.08□□□□□ -0.48
RIOK3-204ENST00000581220 FAM50AQ14320 339 aaKnown RBP12.07□□□□□ -0.48
RIOK3-204ENST00000581220 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
RIOK3-204ENST00000581220 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
RIOK3-204ENST00000581220 SIN3AQ96ST3 1273 aa12.06□□□□□ -0.48
RIOK3-204ENST00000581220 IGF1RP08069 1367 aa12.05□□□□□ -0.48
RIOK3-204ENST00000581220 CHD1O14646 1710 aa12.05□□□□□ -0.48
RIOK3-204ENST00000581220 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
RIOK3-204ENST00000581220 PPP1R15AO75807 674 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-204ENST00000581220 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
RIOK3-204ENST00000581220 CCER2I3L3R5 266 aa12.04□□□□□ -0.48
RIOK3-204ENST00000581220 ANP32CO43423 234 aa12.04□□□□□ -0.48
RIOK3-204ENST00000581220 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
RIOK3-204ENST00000581220 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
RIOK3-204ENST00000581220 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
RIOK3-204ENST00000581220 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
RIOK3-204ENST00000581220 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
RIOK3-204ENST00000581220 HECW2Q9P2P5 1572 aa11.97□□□□□ -0.49
RIOK3-204ENST00000581220 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
RIOK3-204ENST00000581220 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
RIOK3-204ENST00000581220 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.49
RIOK3-204ENST00000581220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.5
RIOK3-204ENST00000581220 P3H3Q8IVL6 736 aa11.96□□□□□ -0.5
RIOK3-204ENST00000581220 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.5
RIOK3-204ENST00000581220 KIF13AQ9H1H9 1805 aa11.95□□□□□ -0.5
RIOK3-204ENST00000581220 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
RIOK3-204ENST00000581220 FGD5Q6ZNL6 1462 aa11.94□□□□□ -0.5
RIOK3-204ENST00000581220 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
RIOK3-204ENST00000581220 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
RIOK3-204ENST00000581220 URB2Q14146 1524 aaKnown RBP11.93□□□□□ -0.5
RIOK3-204ENST00000581220 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
RIOK3-204ENST00000581220 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
RIOK3-204ENST00000581220 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
RIOK3-204ENST00000581220 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
RIOK3-204ENST00000581220 FHOD3Q2V2M9 1422 aa11.9□□□□□ -0.5
RIOK3-204ENST00000581220 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.51
RIOK3-204ENST00000581220 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
RIOK3-204ENST00000581220 FGD6Q6ZV73 1430 aa11.87□□□□□ -0.51
RIOK3-204ENST00000581220 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
RIOK3-204ENST00000581220 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
RIOK3-204ENST00000581220 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
RIOK3-204ENST00000581220 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
RIOK3-204ENST00000581220 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
RIOK3-204ENST00000581220 MTUS2Q5JR59 1369 aa11.84□□□□□ -0.51
RIOK3-204ENST00000581220 CDK11AQ9UQ88 783 aaPredicted RBP11.84□□□□□ -0.51
RIOK3-204ENST00000581220 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
RIOK3-204ENST00000581220 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
RIOK3-204ENST00000581220 KDM6BO15054 1643 aa11.82□□□□□ -0.52
RIOK3-204ENST00000581220 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
RIOK3-204ENST00000581220 CUL7Q14999 1698 aa11.81□□□□□ -0.52
RIOK3-204ENST00000581220 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
RIOK3-204ENST00000581220 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
RIOK3-204ENST00000581220 ERICH6BQ5W0A0 696 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 NAIPQ13075 1403 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 ZNF608Q9ULD9 1512 aaPredicted RBP11.79□□□□□ -0.52
RIOK3-204ENST00000581220 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
RIOK3-204ENST00000581220 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
RIOK3-204ENST00000581220 MYOM3Q5VTT5 1437 aa11.77□□□□□ -0.52
RIOK3-204ENST00000581220 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
RIOK3-204ENST00000581220 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
RIOK3-204ENST00000581220 MSH5O43196 834 aa11.76□□□□□ -0.53
RIOK3-204ENST00000581220 HSPA5P11021 654 aaKnown RBP11.76□□□□□ -0.53
RIOK3-204ENST00000581220 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
RIOK3-204ENST00000581220 SPATA31D1Q6ZQQ2 1576 aa11.76□□□□□ -0.53
RIOK3-204ENST00000581220 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-204ENST00000581220 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-204ENST00000581220 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms