RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 PRKCSHP14314 528 aaPredicted RBP11.75□□□□□ -0.53
SENP3-206ENST00000581093 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
SENP3-206ENST00000581093 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
SENP3-206ENST00000581093 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
SENP3-206ENST00000581093 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
SENP3-206ENST00000581093 GABBR2O75899 941 aa11.62□□□□□ -0.55
SENP3-206ENST00000581093 ILDR1Q86SU0 546 aaPredicted RBP11.62□□□□□ -0.55
SENP3-206ENST00000581093 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
SENP3-206ENST00000581093 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
SENP3-206ENST00000581093 MROH2BQ7Z745 1585 aa11.55□□□□□ -0.56
SENP3-206ENST00000581093 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
SENP3-206ENST00000581093 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
SENP3-206ENST00000581093 RSF1Q96T23 1441 aaPredicted RBP11.53□□□□□ -0.56
SENP3-206ENST00000581093 PRKAR2AP13861 404 aaKnown RBP11.51□□□□□ -0.57
SENP3-206ENST00000581093 CFTRP13569 1480 aa11.5□□□□□ -0.57
SENP3-206ENST00000581093 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
SENP3-206ENST00000581093 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
SENP3-206ENST00000581093 CHD1O14646 1710 aa11.47□□□□□ -0.57
SENP3-206ENST00000581093 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
SENP3-206ENST00000581093 FBLN2P98095 1184 aa11.43□□□□□ -0.58
SENP3-206ENST00000581093 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
SENP3-206ENST00000581093 ARXQ96QS3 562 aa11.42□□□□□ -0.58
SENP3-206ENST00000581093 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SENP3-206ENST00000581093 WIZO95785 1651 aa11.37□□□□□ -0.59
SENP3-206ENST00000581093 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
SENP3-206ENST00000581093 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
SENP3-206ENST00000581093 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
SENP3-206ENST00000581093 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
SENP3-206ENST00000581093 ATF5Q9Y2D1 282 aaPredicted RBP11.32□□□□□ -0.6
SENP3-206ENST00000581093 KCNA4P22459 653 aa11.31□□□□□ -0.6
SENP3-206ENST00000581093 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
SENP3-206ENST00000581093 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
SENP3-206ENST00000581093 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
SENP3-206ENST00000581093 POTEMA6NI47 508 aa11.29□□□□□ -0.6
SENP3-206ENST00000581093 TARBP1Q13395 1621 aaKnown RBP11.28□□□□□ -0.6
SENP3-206ENST00000581093 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
SENP3-206ENST00000581093 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
SENP3-206ENST00000581093 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
SENP3-206ENST00000581093 SYNJ1O43426 1573 aa11.26□□□□□ -0.61
SENP3-206ENST00000581093 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
SENP3-206ENST00000581093 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
SENP3-206ENST00000581093 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
SENP3-206ENST00000581093 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
SENP3-206ENST00000581093 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
SENP3-206ENST00000581093 KIF13AQ9H1H9 1805 aa11.2□□□□□ -0.62
SENP3-206ENST00000581093 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
SENP3-206ENST00000581093 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
SENP3-206ENST00000581093 TOP2AP11388 1531 aaKnown RBP11.18□□□□□ -0.62
SENP3-206ENST00000581093 POLA1P09884 1462 aaPredicted RBP11.18□□□□□ -0.62
SENP3-206ENST00000581093 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
SENP3-206ENST00000581093 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
SENP3-206ENST00000581093 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
SENP3-206ENST00000581093 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
SENP3-206ENST00000581093 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
SENP3-206ENST00000581093 SYNJ2O15056 1496 aa11.14□□□□□ -0.63
SENP3-206ENST00000581093 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
SENP3-206ENST00000581093 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
SENP3-206ENST00000581093 SOGA1O94964 1423 aa11.12□□□□□ -0.63
SENP3-206ENST00000581093 DCBLD2Q96PD2 775 aa11.12□□□□□ -0.63
SENP3-206ENST00000581093 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
SENP3-206ENST00000581093 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
SENP3-206ENST00000581093 EIF5BO60841 1220 aaKnown RBP11.11□□□□□ -0.63
SENP3-206ENST00000581093 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
SENP3-206ENST00000581093 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
SENP3-206ENST00000581093 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
SENP3-206ENST00000581093 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
SENP3-206ENST00000581093 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
SENP3-206ENST00000581093 HECW2Q9P2P5 1572 aa11.07□□□□□ -0.64
SENP3-206ENST00000581093 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
SENP3-206ENST00000581093 KDM6BO15054 1643 aa11.07□□□□□ -0.64
SENP3-206ENST00000581093 ABCC10Q5T3U5 1492 aa11.06□□□□□ -0.64
SENP3-206ENST00000581093 CLCN6P51797 869 aa11.05□□□□□ -0.64
SENP3-206ENST00000581093 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
SENP3-206ENST00000581093 ADGRL1O94910 1474 aa11.01□□□□□ -0.65
SENP3-206ENST00000581093 LMTK3Q96Q04 1460 aa11.01□□□□□ -0.65
SENP3-206ENST00000581093 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
SENP3-206ENST00000581093 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
SENP3-206ENST00000581093 PBRM1Q86U86 1689 aa10.98□□□□□ -0.65
SENP3-206ENST00000581093 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
SENP3-206ENST00000581093 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
SENP3-206ENST00000581093 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
SENP3-206ENST00000581093 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
SENP3-206ENST00000581093 MAPKBP1O60336 1514 aa10.97□□□□□ -0.65
SENP3-206ENST00000581093 TSPOAP1O95153 1857 aa10.97□□□□□ -0.65
SENP3-206ENST00000581093 SHROOM2Q13796 1616 aa10.96□□□□□ -0.65
SENP3-206ENST00000581093 SOCS7O14512 581 aa10.95□□□□□ -0.66
SENP3-206ENST00000581093 GRIN2AQ12879 1464 aa10.94□□□□□ -0.66
SENP3-206ENST00000581093 NUP160Q12769 1436 aa10.94□□□□□ -0.66
SENP3-206ENST00000581093 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
SENP3-206ENST00000581093 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
SENP3-206ENST00000581093 ZNF692Q9BU19 519 aaPredicted RBP10.9□□□□□ -0.66
SENP3-206ENST00000581093 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.66
SENP3-206ENST00000581093 ILDR2Q71H61 639 aa10.89□□□□□ -0.67
SENP3-206ENST00000581093 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
SENP3-206ENST00000581093 CUX1P39880 1505 aa10.89□□□□□ -0.67
SENP3-206ENST00000581093 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
SENP3-206ENST00000581093 ADCY10Q96PN6 1610 aa10.85□□□□□ -0.67
SENP3-206ENST00000581093 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
SENP3-206ENST00000581093 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
SENP3-206ENST00000581093 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms