RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
CCDC144CP-203ENST00000580574 GRIN2BQ13224 1484 aa21.26■□□□□ 0.99
CCDC144CP-203ENST00000580574 NCBP3Q53F19 620 aaKnown RBP21.23■□□□□ 0.99
CCDC144CP-203ENST00000580574 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
CCDC144CP-203ENST00000580574 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
CCDC144CP-203ENST00000580574 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
CCDC144CP-203ENST00000580574 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
CCDC144CP-203ENST00000580574 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
CCDC144CP-203ENST00000580574 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
CCDC144CP-203ENST00000580574 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
CCDC144CP-203ENST00000580574 CACNB1Q02641 598 aaPredicted RBP21.12■□□□□ 0.97
CCDC144CP-203ENST00000580574 RNF39Q9H2S5 420 aa21.09■□□□□ 0.97
CCDC144CP-203ENST00000580574 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
CCDC144CP-203ENST00000580574 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.97
CCDC144CP-203ENST00000580574 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
CCDC144CP-203ENST00000580574 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.96
CCDC144CP-203ENST00000580574 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
CCDC144CP-203ENST00000580574 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
CCDC144CP-203ENST00000580574 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
CCDC144CP-203ENST00000580574 CHD1O14646 1710 aa20.98■□□□□ 0.95
CCDC144CP-203ENST00000580574 CEP170Q5SW79 1584 aa20.92■□□□□ 0.94
CCDC144CP-203ENST00000580574 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
CCDC144CP-203ENST00000580574 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
CCDC144CP-203ENST00000580574 NUP160Q12769 1436 aa20.9■□□□□ 0.94
CCDC144CP-203ENST00000580574 KIAA0586Q9BVV6 1533 aa20.84■□□□□ 0.93
CCDC144CP-203ENST00000580574 IQGAP2Q13576 1575 aa20.84■□□□□ 0.93
CCDC144CP-203ENST00000580574 FBLN2P98095 1184 aa20.83■□□□□ 0.93
CCDC144CP-203ENST00000580574 CLIP1P30622 1438 aa20.82■□□□□ 0.92
CCDC144CP-203ENST00000580574 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
CCDC144CP-203ENST00000580574 SAMD9Q5K651 1589 aa20.78■□□□□ 0.92
CCDC144CP-203ENST00000580574 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
CCDC144CP-203ENST00000580574 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
CCDC144CP-203ENST00000580574 C1QBPQ07021 282 aaKnown RBP20.75■□□□□ 0.91
CCDC144CP-203ENST00000580574 CLASP1Q7Z460 1538 aa20.74■□□□□ 0.91
CCDC144CP-203ENST00000580574 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
CCDC144CP-203ENST00000580574 SHROOM2Q13796 1616 aa20.72■□□□□ 0.91
CCDC144CP-203ENST00000580574 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
CCDC144CP-203ENST00000580574 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
CCDC144CP-203ENST00000580574 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
CCDC144CP-203ENST00000580574 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
CCDC144CP-203ENST00000580574 KCNA4P22459 653 aa20.62■□□□□ 0.89
CCDC144CP-203ENST00000580574 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
CCDC144CP-203ENST00000580574 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
CCDC144CP-203ENST00000580574 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
CCDC144CP-203ENST00000580574 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
CCDC144CP-203ENST00000580574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCDC144CP-203ENST00000580574 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
CCDC144CP-203ENST00000580574 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
CCDC144CP-203ENST00000580574 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
CCDC144CP-203ENST00000580574 FMN1Q68DA7 1419 aa20.51■□□□□ 0.87
CCDC144CP-203ENST00000580574 PCF11O94913 1555 aaKnown RBP20.5■□□□□ 0.87
CCDC144CP-203ENST00000580574 CASKIN1Q8WXD9 1431 aa20.47■□□□□ 0.87
CCDC144CP-203ENST00000580574 LRRIQ1Q96JM4 1722 aa20.47■□□□□ 0.87
CCDC144CP-203ENST00000580574 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
CCDC144CP-203ENST00000580574 ABCA8O94911 1581 aa20.41■□□□□ 0.86
CCDC144CP-203ENST00000580574 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
CCDC144CP-203ENST00000580574 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
CCDC144CP-203ENST00000580574 CFAP43Q8NDM7 1665 aa20.38■□□□□ 0.85
CCDC144CP-203ENST00000580574 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
CCDC144CP-203ENST00000580574 PTPRGP23470 1445 aa20.37■□□□□ 0.85
CCDC144CP-203ENST00000580574 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
CCDC144CP-203ENST00000580574 PLB1Q6P1J6 1458 aa20.36■□□□□ 0.85
CCDC144CP-203ENST00000580574 NUP153P49790 1475 aaKnown RBP20.33■□□□□ 0.85
CCDC144CP-203ENST00000580574 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
CCDC144CP-203ENST00000580574 EPRSP07814 1512 aaKnown RBP20.3■□□□□ 0.84
CCDC144CP-203ENST00000580574 TTBK1Q5TCY1 1321 aaPredicted RBP20.29■□□□□ 0.84
CCDC144CP-203ENST00000580574 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
CCDC144CP-203ENST00000580574 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
CCDC144CP-203ENST00000580574 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
CCDC144CP-203ENST00000580574 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
CCDC144CP-203ENST00000580574 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
CCDC144CP-203ENST00000580574 ABCC2Q92887 1545 aa20.27■□□□□ 0.83
CCDC144CP-203ENST00000580574 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
CCDC144CP-203ENST00000580574 APLP2Q06481 763 aa20.25■□□□□ 0.83
CCDC144CP-203ENST00000580574 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
CCDC144CP-203ENST00000580574 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
CCDC144CP-203ENST00000580574 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
CCDC144CP-203ENST00000580574 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
CCDC144CP-203ENST00000580574 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
CCDC144CP-203ENST00000580574 U3KPZ7 1027 aaPredicted RBP20.22■□□□□ 0.83
CCDC144CP-203ENST00000580574 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
CCDC144CP-203ENST00000580574 ADCY10Q96PN6 1610 aa20.21■□□□□ 0.83
CCDC144CP-203ENST00000580574 ATP10BO94823 1461 aa20.21■□□□□ 0.83
CCDC144CP-203ENST00000580574 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
CCDC144CP-203ENST00000580574 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
CCDC144CP-203ENST00000580574 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
CCDC144CP-203ENST00000580574 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
CCDC144CP-203ENST00000580574 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
CCDC144CP-203ENST00000580574 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
CCDC144CP-203ENST00000580574 SLC4A2P04920 1241 aa20.08■□□□□ 0.81
CCDC144CP-203ENST00000580574 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
CCDC144CP-203ENST00000580574 CDK11AQ9UQ88 783 aaPredicted RBP20.05■□□□□ 0.8
CCDC144CP-203ENST00000580574 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
CCDC144CP-203ENST00000580574 KIF14Q15058 1648 aa20.04■□□□□ 0.8
CCDC144CP-203ENST00000580574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
CCDC144CP-203ENST00000580574 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
CCDC144CP-203ENST00000580574 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
CCDC144CP-203ENST00000580574 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
CCDC144CP-203ENST00000580574 CYB5RLQ6IPT4 315 aa20.01■□□□□ 0.79
CCDC144CP-203ENST00000580574 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms