RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 RAPGEF2Q9Y4G8 1499 aa13.02□□□□□ -0.33
KPNB1-210ENST00000580573 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
KPNB1-210ENST00000580573 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
KPNB1-210ENST00000580573 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
KPNB1-210ENST00000580573 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
KPNB1-210ENST00000580573 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
KPNB1-210ENST00000580573 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
KPNB1-210ENST00000580573 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
KPNB1-210ENST00000580573 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
KPNB1-210ENST00000580573 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
KPNB1-210ENST00000580573 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.348e-8■■■□□ 15.5
KPNB1-210ENST00000580573 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
KPNB1-210ENST00000580573 FHAD1B1AJZ9 1412 aa12.9□□□□□ -0.34
KPNB1-210ENST00000580573 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
KPNB1-210ENST00000580573 SNAPC4Q5SXM2 1469 aa12.87□□□□□ -0.35
KPNB1-210ENST00000580573 SYNJ2O15056 1496 aa12.84□□□□□ -0.35
KPNB1-210ENST00000580573 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
KPNB1-210ENST00000580573 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
KPNB1-210ENST00000580573 CLIP1P30622 1438 aa12.8□□□□□ -0.36
KPNB1-210ENST00000580573 ZBTB22O15209 634 aa12.8□□□□□ -0.36
KPNB1-210ENST00000580573 SAMD9Q5K651 1589 aa12.8□□□□□ -0.36
KPNB1-210ENST00000580573 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
KPNB1-210ENST00000580573 CHD1O14646 1710 aa12.79□□□□□ -0.36
KPNB1-210ENST00000580573 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
KPNB1-210ENST00000580573 IQGAP2Q13576 1575 aa12.77□□□□□ -0.36
KPNB1-210ENST00000580573 NUP160Q12769 1436 aa12.77□□□□□ -0.37
KPNB1-210ENST00000580573 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
KPNB1-210ENST00000580573 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
KPNB1-210ENST00000580573 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
KPNB1-210ENST00000580573 KIAA0586Q9BVV6 1533 aa12.74□□□□□ -0.37
KPNB1-210ENST00000580573 UGGT2Q9NYU1 1516 aa12.74□□□□□ -0.37
KPNB1-210ENST00000580573 VPS8Q8N3P4 1428 aa12.72□□□□□ -0.37
KPNB1-210ENST00000580573 SHROOM2Q13796 1616 aa12.69□□□□□ -0.38
KPNB1-210ENST00000580573 KIAA0556O60303 1618 aa12.66□□□□□ -0.38
KPNB1-210ENST00000580573 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
KPNB1-210ENST00000580573 DISP1Q96F81 1524 aa12.65□□□□□ -0.38
KPNB1-210ENST00000580573 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
KPNB1-210ENST00000580573 PCF11O94913 1555 aaKnown RBP12.63□□□□□ -0.39
KPNB1-210ENST00000580573 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
KPNB1-210ENST00000580573 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
KPNB1-210ENST00000580573 FYCO1Q9BQS8 1478 aa12.6□□□□□ -0.39
KPNB1-210ENST00000580573 LRRIQ1Q96JM4 1722 aa12.6□□□□□ -0.39
KPNB1-210ENST00000580573 FHOD3Q2V2M9 1422 aa12.6□□□□□ -0.39
KPNB1-210ENST00000580573 FMN1Q68DA7 1419 aa12.6□□□□□ -0.39
KPNB1-210ENST00000580573 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
KPNB1-210ENST00000580573 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
KPNB1-210ENST00000580573 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
KPNB1-210ENST00000580573 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
KPNB1-210ENST00000580573 FBLN2P98095 1184 aa12.53□□□□□ -0.4
KPNB1-210ENST00000580573 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
KPNB1-210ENST00000580573 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
KPNB1-210ENST00000580573 RAPGEF6Q8TEU7 1601 aa12.51□□□□□ -0.41
KPNB1-210ENST00000580573 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
KPNB1-210ENST00000580573 DCAF8L1A6NGE4 600 aa12.5□□□□□ -0.41
KPNB1-210ENST00000580573 ABCA8O94911 1581 aa12.5□□□□□ -0.41
KPNB1-210ENST00000580573 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
KPNB1-210ENST00000580573 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
KPNB1-210ENST00000580573 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
KPNB1-210ENST00000580573 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
KPNB1-210ENST00000580573 NUP153P49790 1475 aaKnown RBP12.46□□□□□ -0.42
KPNB1-210ENST00000580573 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.42
KPNB1-210ENST00000580573 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
KPNB1-210ENST00000580573 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
KPNB1-210ENST00000580573 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
KPNB1-210ENST00000580573 PLB1Q6P1J6 1458 aa12.41□□□□□ -0.42
KPNB1-210ENST00000580573 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
KPNB1-210ENST00000580573 MAGI3Q5TCQ9 1506 aa12.41□□□□□ -0.42
KPNB1-210ENST00000580573 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
KPNB1-210ENST00000580573 ABCC2Q92887 1545 aa12.39□□□□□ -0.43
KPNB1-210ENST00000580573 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
KPNB1-210ENST00000580573 SUPT6HQ7KZ85 1726 aaKnown RBP12.39□□□□□ -0.43
KPNB1-210ENST00000580573 UHRF1BP1LA0JNW5 1464 aa12.39□□□□□ -0.43
KPNB1-210ENST00000580573 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
KPNB1-210ENST00000580573 APLP2Q06481 763 aa12.38□□□□□ -0.43
KPNB1-210ENST00000580573 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
KPNB1-210ENST00000580573 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
KPNB1-210ENST00000580573 PTPRGP23470 1445 aa12.37□□□□□ -0.43
KPNB1-210ENST00000580573 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
KPNB1-210ENST00000580573 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
KPNB1-210ENST00000580573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.35□□□□□ -0.433e-11■■□□□ 12.6
KPNB1-210ENST00000580573 ATP10BO94823 1461 aa12.34□□□□□ -0.43
KPNB1-210ENST00000580573 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
KPNB1-210ENST00000580573 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
KPNB1-210ENST00000580573 ZCCHC11Q5TAX3 1644 aaKnown RBP12.32□□□□□ -0.44
KPNB1-210ENST00000580573 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
KPNB1-210ENST00000580573 NCOA2Q15596 1464 aa12.31□□□□□ -0.44
KPNB1-210ENST00000580573 TROQ12816 1431 aaPredicted RBP12.3□□□□□ -0.44
KPNB1-210ENST00000580573 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
KPNB1-210ENST00000580573 PHLDB1Q86UU1 1377 aa12.29□□□□□ -0.44
KPNB1-210ENST00000580573 KIF14Q15058 1648 aa12.28□□□□□ -0.44
KPNB1-210ENST00000580573 ITSN2Q9NZM3 1697 aa12.28□□□□□ -0.44
KPNB1-210ENST00000580573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
KPNB1-210ENST00000580573 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
KPNB1-210ENST00000580573 FGD6Q6ZV73 1430 aa12.25□□□□□ -0.45
KPNB1-210ENST00000580573 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms