RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 NESP48681 1621 aa13.64□□□□□ -0.23
PPP4R1-213ENST00000579609 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
PPP4R1-213ENST00000579609 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-213ENST00000579609 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
PPP4R1-213ENST00000579609 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
PPP4R1-213ENST00000579609 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
PPP4R1-213ENST00000579609 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
PPP4R1-213ENST00000579609 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
PPP4R1-213ENST00000579609 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
PPP4R1-213ENST00000579609 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
PPP4R1-213ENST00000579609 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-213ENST00000579609 APLP2Q06481 763 aa13.57□□□□□ -0.24
PPP4R1-213ENST00000579609 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
PPP4R1-213ENST00000579609 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
PPP4R1-213ENST00000579609 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
PPP4R1-213ENST00000579609 AQRO60306 1485 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■■■■ 30.6
PPP4R1-213ENST00000579609 WDR62O43379 1518 aa13.51□□□□□ -0.25
PPP4R1-213ENST00000579609 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
PPP4R1-213ENST00000579609 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
PPP4R1-213ENST00000579609 CFAP43Q8NDM7 1665 aa13.5□□□□□ -0.25
PPP4R1-213ENST00000579609 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
PPP4R1-213ENST00000579609 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
PPP4R1-213ENST00000579609 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
PPP4R1-213ENST00000579609 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
PPP4R1-213ENST00000579609 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
PPP4R1-213ENST00000579609 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.26
PPP4R1-213ENST00000579609 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
PPP4R1-213ENST00000579609 FMN1Q68DA7 1419 aa13.43□□□□□ -0.26
PPP4R1-213ENST00000579609 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
PPP4R1-213ENST00000579609 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
PPP4R1-213ENST00000579609 GRIN2BQ13224 1484 aa13.41□□□□□ -0.26
PPP4R1-213ENST00000579609 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
PPP4R1-213ENST00000579609 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-213ENST00000579609 PPARGC1BQ86YN6 1023 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-213ENST00000579609 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
PPP4R1-213ENST00000579609 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
PPP4R1-213ENST00000579609 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-213ENST00000579609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.35□□□□□ -0.27
PPP4R1-213ENST00000579609 IQGAP2Q13576 1575 aa13.34□□□□□ -0.27
PPP4R1-213ENST00000579609 CCER1Q8TC90 406 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-213ENST00000579609 SNAPC4Q5SXM2 1469 aa13.33□□□□□ -0.28
PPP4R1-213ENST00000579609 UGGT2Q9NYU1 1516 aa13.32□□□□□ -0.28
PPP4R1-213ENST00000579609 MAGI1Q96QZ7 1491 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-213ENST00000579609 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
PPP4R1-213ENST00000579609 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
PPP4R1-213ENST00000579609 EIF4G3O43432 1585 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-213ENST00000579609 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
PPP4R1-213ENST00000579609 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
PPP4R1-213ENST00000579609 HECW1Q76N89 1606 aa13.28□□□□□ -0.28
PPP4R1-213ENST00000579609 KANK4Q5T7N3 995 aaPredicted RBP13.27□□□□□ -0.29
PPP4R1-213ENST00000579609 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
PPP4R1-213ENST00000579609 EHBP1L1Q8N3D4 1523 aa13.26□□□□□ -0.29
PPP4R1-213ENST00000579609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-213ENST00000579609 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-213ENST00000579609 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
PPP4R1-213ENST00000579609 SUPT6HQ7KZ85 1726 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-213ENST00000579609 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
PPP4R1-213ENST00000579609 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
PPP4R1-213ENST00000579609 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
PPP4R1-213ENST00000579609 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
PPP4R1-213ENST00000579609 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
PPP4R1-213ENST00000579609 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-213ENST00000579609 TTBK1Q5TCY1 1321 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-213ENST00000579609 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-213ENST00000579609 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-213ENST00000579609 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
PPP4R1-213ENST00000579609 NUP160Q12769 1436 aa13.15□□□□□ -0.3
PPP4R1-213ENST00000579609 ACIN1Q9UKV3 1341 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-213ENST00000579609 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
PPP4R1-213ENST00000579609 MTUS2Q5JR59 1369 aa13.14□□□□□ -0.31
PPP4R1-213ENST00000579609 DHX57Q6P158 1386 aaKnown RBP13.14□□□□□ -0.31
PPP4R1-213ENST00000579609 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
PPP4R1-213ENST00000579609 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
PPP4R1-213ENST00000579609 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
PPP4R1-213ENST00000579609 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
PPP4R1-213ENST00000579609 TCOF1Q13428 1488 aaKnown RBP13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
PPP4R1-213ENST00000579609 CARMIL2Q6F5E8 1435 aa13.09□□□□□ -0.31
PPP4R1-213ENST00000579609 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
PPP4R1-213ENST00000579609 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
PPP4R1-213ENST00000579609 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
PPP4R1-213ENST00000579609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
PPP4R1-213ENST00000579609 TIMELESSQ9UNS1 1208 aa13.06□□□□□ -0.32
PPP4R1-213ENST00000579609 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
PPP4R1-213ENST00000579609 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
PPP4R1-213ENST00000579609 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
PPP4R1-213ENST00000579609 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
PPP4R1-213ENST00000579609 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
PPP4R1-213ENST00000579609 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
PPP4R1-213ENST00000579609 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
PPP4R1-213ENST00000579609 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-213ENST00000579609 CHMP7Q8WUX9 453 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-213ENST00000579609 CDK11AQ9UQ88 783 aaPredicted RBP13.01□□□□□ -0.33
PPP4R1-213ENST00000579609 MAPKBP1O60336 1514 aa13□□□□□ -0.33
PPP4R1-213ENST00000579609 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
PPP4R1-213ENST00000579609 ABCA8O94911 1581 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms