RNA–Protein interactions for RNA: ENST00000579565.5

MSL1-206, Transcript of male specific lethal 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-206ENST00000579565 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
MSL1-206ENST00000579565 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
MSL1-206ENST00000579565 KIAA0586Q9BVV6 1533 aa29.5■■■□□ 2.31
MSL1-206ENST00000579565 SHROOM2Q13796 1616 aa29.46■■■□□ 2.31
MSL1-206ENST00000579565 IQGAP2Q13576 1575 aa29.41■■■□□ 2.3
MSL1-206ENST00000579565 KIF21BO75037 1637 aa29.41■■■□□ 2.3
MSL1-206ENST00000579565 JPH4Q96JJ6 628 aa29.39■■■□□ 2.3
MSL1-206ENST00000579565 CTTNBP2Q8WZ74 1663 aa29.39■■■□□ 2.3
MSL1-206ENST00000579565 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
MSL1-206ENST00000579565 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
MSL1-206ENST00000579565 ARAP1Q96P48 1450 aa29.32■■■□□ 2.28
MSL1-206ENST00000579565 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
MSL1-206ENST00000579565 GOLGA3Q08378 1498 aa29.27■■■□□ 2.28
MSL1-206ENST00000579565 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
MSL1-206ENST00000579565 UGGT2Q9NYU1 1516 aa29.23■■■□□ 2.27
MSL1-206ENST00000579565 CARMIL2Q6F5E8 1435 aa29.22■■■□□ 2.27
MSL1-206ENST00000579565 UBTFP17480 764 aaKnown RBP29.19■■■□□ 2.26
MSL1-206ENST00000579565 DISP1Q96F81 1524 aa29.14■■■□□ 2.26
MSL1-206ENST00000579565 KIAA0556O60303 1618 aa29.13■■■□□ 2.25
MSL1-206ENST00000579565 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
MSL1-206ENST00000579565 RANGAP1P46060 587 aaPredicted RBP29.08■■■□□ 2.25
MSL1-206ENST00000579565 TTBK1Q5TCY1 1321 aaPredicted RBP29.08■■■□□ 2.24
MSL1-206ENST00000579565 PTPRGP23470 1445 aa29.04■■■□□ 2.24
MSL1-206ENST00000579565 SAMD9Q5K651 1589 aa28.99■■■□□ 2.23
MSL1-206ENST00000579565 P3H3Q8IVL6 736 aa28.95■■■□□ 2.23
MSL1-206ENST00000579565 EFCAB5A4FU69 1503 aa28.95■■■□□ 2.22
MSL1-206ENST00000579565 ADCY10Q96PN6 1610 aa28.88■■■□□ 2.21
MSL1-206ENST00000579565 FHOD3Q2V2M9 1422 aa28.87■■■□□ 2.21
MSL1-206ENST00000579565 UACAQ9BZF9 1416 aa28.85■■■□□ 2.21
MSL1-206ENST00000579565 ABCC2Q92887 1545 aa28.82■■■□□ 2.2
MSL1-206ENST00000579565 ARHGAP35Q9NRY4 1499 aa28.8■■■□□ 2.2
MSL1-206ENST00000579565 NPM1P06748 294 aaKnown RBP eCLIP28.8■■■□□ 2.2
MSL1-206ENST00000579565 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
MSL1-206ENST00000579565 PLB1Q6P1J6 1458 aa28.79■■■□□ 2.2
MSL1-206ENST00000579565 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
MSL1-206ENST00000579565 ABCA8O94911 1581 aa28.76■■■□□ 2.19
MSL1-206ENST00000579565 CLIP1P30622 1438 aa28.75■■■□□ 2.19
MSL1-206ENST00000579565 RAPGEF6Q8TEU7 1601 aa28.69■■■□□ 2.18
MSL1-206ENST00000579565 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
MSL1-206ENST00000579565 FMN1Q68DA7 1419 aa28.67■■■□□ 2.18
MSL1-206ENST00000579565 KDM5BQ9UGL1 1544 aa28.65■■■□□ 2.18
MSL1-206ENST00000579565 MAPKBP1O60336 1514 aa28.64■■■□□ 2.18
MSL1-206ENST00000579565 ZCCHC11Q5TAX3 1644 aaKnown RBP28.64■■■□□ 2.17
MSL1-206ENST00000579565 TRHP20396 242 aaPredicted RBP28.62■■■□□ 2.17
MSL1-206ENST00000579565 ARID3CA6NKF2 412 aa28.6■■■□□ 2.17
MSL1-206ENST00000579565 NUP153P49790 1475 aaKnown RBP28.56■■■□□ 2.16
MSL1-206ENST00000579565 ASXL2Q76L83 1435 aa28.55■■■□□ 2.16
MSL1-206ENST00000579565 HECW1Q76N89 1606 aa28.54■■■□□ 2.16
MSL1-206ENST00000579565 ATP1B4Q9UN42 357 aaPredicted RBP28.53■■■□□ 2.16
MSL1-206ENST00000579565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.52■■■□□ 2.16
MSL1-206ENST00000579565 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
MSL1-206ENST00000579565 ATP10BO94823 1461 aa28.51■■■□□ 2.15
MSL1-206ENST00000579565 PCF11O94913 1555 aaKnown RBP28.49■■■□□ 2.15
MSL1-206ENST00000579565 ABCC10Q5T3U5 1492 aa28.47■■■□□ 2.15
MSL1-206ENST00000579565 DIP2BQ9P265 1576 aa28.46■■■□□ 2.15
MSL1-206ENST00000579565 WDR7Q9Y4E6 1490 aa28.45■■■□□ 2.15
MSL1-206ENST00000579565 CASKIN1Q8WXD9 1431 aa28.45■■■□□ 2.15
MSL1-206ENST00000579565 FAM69CQ0P6D2 419 aa28.43■■■□□ 2.14
MSL1-206ENST00000579565 FYCO1Q9BQS8 1478 aa28.42■■■□□ 2.14
MSL1-206ENST00000579565 KIF13AQ9H1H9 1805 aa28.42■■■□□ 2.14
MSL1-206ENST00000579565 CDK13Q14004 1512 aaKnown RBP28.42■■■□□ 2.14
MSL1-206ENST00000579565 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
MSL1-206ENST00000579565 CCDC18Q5T9S5 1454 aa28.35■■■□□ 2.13
MSL1-206ENST00000579565 KCNH8Q96L42 1107 aa28.34■■■□□ 2.13
MSL1-206ENST00000579565 LRRIQ1Q96JM4 1722 aa28.33■■■□□ 2.13
MSL1-206ENST00000579565 GLI2P10070 1586 aa28.33■■■□□ 2.13
MSL1-206ENST00000579565 PLEKHD1A6NEE1 506 aa28.32■■■□□ 2.12
MSL1-206ENST00000579565 VPS8Q8N3P4 1428 aa28.31■■■□□ 2.12
MSL1-206ENST00000579565 CDK11AQ9UQ88 783 aaPredicted RBP28.28■■■□□ 2.12
MSL1-206ENST00000579565 MAP3K4Q9Y6R4 1608 aa28.22■■■□□ 2.11
MSL1-206ENST00000579565 TSPOAP1O95153 1857 aa28.22■■■□□ 2.11
MSL1-206ENST00000579565 CFAP43Q8NDM7 1665 aa28.2■■■□□ 2.1
MSL1-206ENST00000579565 TROQ12816 1431 aaPredicted RBP28.18■■■□□ 2.1
MSL1-206ENST00000579565 ABCA9Q8IUA7 1624 aa28.17■■■□□ 2.1
MSL1-206ENST00000579565 CD109Q6YHK3 1445 aa28.16■■■□□ 2.1
MSL1-206ENST00000579565 KIF14Q15058 1648 aa28.14■■■□□ 2.1
MSL1-206ENST00000579565 MAGI3Q5TCQ9 1506 aa28.12■■■□□ 2.09
MSL1-206ENST00000579565 PPRC1Q5VV67 1664 aaKnown RBP28.11■■■□□ 2.09
MSL1-206ENST00000579565 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
MSL1-206ENST00000579565 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.1■■■□□ 2.093e-7■■■□□ 18.2
MSL1-206ENST00000579565 TTC37Q6PGP7 1564 aa28.1■■■□□ 2.09
MSL1-206ENST00000579565 MTUS2Q5JR59 1369 aa28.08■■■□□ 2.09
MSL1-206ENST00000579565 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
MSL1-206ENST00000579565 EHBP1L1Q8N3D4 1523 aa28.04■■■□□ 2.08
MSL1-206ENST00000579565 APLP2Q06481 763 aa28.03■■■□□ 2.08
MSL1-206ENST00000579565 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
MSL1-206ENST00000579565 MYO5CQ9NQX4 1742 aa27.98■■■□□ 2.07
MSL1-206ENST00000579565 KDM6BO15054 1643 aa27.97■■■□□ 2.07
MSL1-206ENST00000579565 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
MSL1-206ENST00000579565 PLCH2O75038 1416 aa27.93■■■□□ 2.06
MSL1-206ENST00000579565 CFAP74Q9C0B2 1584 aa27.93■■■□□ 2.06
MSL1-206ENST00000579565 FANCAO15360 1455 aa27.92■■■□□ 2.06
MSL1-206ENST00000579565 NEO1Q92859 1461 aa27.92■■■□□ 2.06
MSL1-206ENST00000579565 ARHGAP5Q13017 1502 aa27.9■■■□□ 2.06
MSL1-206ENST00000579565 SUPT6HQ7KZ85 1726 aaKnown RBP27.9■■■□□ 2.06
MSL1-206ENST00000579565 ARAP3Q8WWN8 1544 aa27.89■■■□□ 2.05
MSL1-206ENST00000579565 PREX2Q70Z35 1606 aa27.88■■■□□ 2.05
MSL1-206ENST00000579565 KANK4Q5T7N3 995 aaPredicted RBP27.87■■■□□ 2.05
MSL1-206ENST00000579565 PHLDB1Q86UU1 1377 aa27.87■■■□□ 2.05
MSL1-206ENST00000579565 CCNB3Q8WWL7 1395 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms