RNA–Protein interactions for RNA: ENST00000579475.7

NOTCH2-206, Transcript of notch 2, humanhuman

TSL 1 (best) BASIC

Gene NOTCH2, Length 2,954 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-206ENST00000579475 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
NOTCH2-206ENST00000579475 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
NOTCH2-206ENST00000579475 CUX1P39880 1505 aa11.62□□□□□ -0.55
NOTCH2-206ENST00000579475 ANP32CO43423 234 aa11.62□□□□□ -0.55
NOTCH2-206ENST00000579475 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
NOTCH2-206ENST00000579475 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
NOTCH2-206ENST00000579475 FANCIQ9NVI1 1328 aa11.6□□□□□ -0.55
NOTCH2-206ENST00000579475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.59□□□□□ -0.55
NOTCH2-206ENST00000579475 ITGAEP38570 1179 aa11.58□□□□□ -0.55
NOTCH2-206ENST00000579475 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.56
NOTCH2-206ENST00000579475 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
NOTCH2-206ENST00000579475 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
NOTCH2-206ENST00000579475 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
NOTCH2-206ENST00000579475 ERICH6BQ5W0A0 696 aa11.57□□□□□ -0.56
NOTCH2-206ENST00000579475 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
NOTCH2-206ENST00000579475 MSH5O43196 834 aa11.54□□□□□ -0.56
NOTCH2-206ENST00000579475 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
NOTCH2-206ENST00000579475 TRIM52Q96A61 297 aa11.53□□□□□ -0.56
NOTCH2-206ENST00000579475 CFTRP13569 1480 aa11.53□□□□□ -0.56
NOTCH2-206ENST00000579475 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.56
NOTCH2-206ENST00000579475 NCAPD3P42695 1498 aa11.52□□□□□ -0.57
NOTCH2-206ENST00000579475 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
NOTCH2-206ENST00000579475 IGF1RP08069 1367 aa11.5□□□□□ -0.57
NOTCH2-206ENST00000579475 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
NOTCH2-206ENST00000579475 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
NOTCH2-206ENST00000579475 FAM50AQ14320 339 aaKnown RBP11.48□□□□□ -0.57
NOTCH2-206ENST00000579475 FYCO1Q9BQS8 1478 aa11.48□□□□□ -0.57
NOTCH2-206ENST00000579475 PCF11O94913 1555 aaKnown RBP11.47□□□□□ -0.57
NOTCH2-206ENST00000579475 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.57
NOTCH2-206ENST00000579475 CARMIL1Q5VZK9 1371 aa11.46□□□□□ -0.57
NOTCH2-206ENST00000579475 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.58
NOTCH2-206ENST00000579475 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
NOTCH2-206ENST00000579475 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
NOTCH2-206ENST00000579475 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
NOTCH2-206ENST00000579475 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
NOTCH2-206ENST00000579475 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
NOTCH2-206ENST00000579475 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
NOTCH2-206ENST00000579475 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
NOTCH2-206ENST00000579475 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
NOTCH2-206ENST00000579475 FGD6Q6ZV73 1430 aa11.41□□□□□ -0.58
NOTCH2-206ENST00000579475 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.58
NOTCH2-206ENST00000579475 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
NOTCH2-206ENST00000579475 KDM5BQ9UGL1 1544 aa11.38□□□□□ -0.59
NOTCH2-206ENST00000579475 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
NOTCH2-206ENST00000579475 IRX6P78412 446 aaPredicted RBP11.36□□□□□ -0.59
NOTCH2-206ENST00000579475 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
NOTCH2-206ENST00000579475 NAIPQ13075 1403 aa11.35□□□□□ -0.59
NOTCH2-206ENST00000579475 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
NOTCH2-206ENST00000579475 FHOD3Q2V2M9 1422 aa11.34□□□□□ -0.59
NOTCH2-206ENST00000579475 ZBED9Q6R2W3 1325 aa11.33□□□□□ -0.6
NOTCH2-206ENST00000579475 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
NOTCH2-206ENST00000579475 CUL7Q14999 1698 aa11.33□□□□□ -0.6
NOTCH2-206ENST00000579475 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
NOTCH2-206ENST00000579475 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
NOTCH2-206ENST00000579475 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
NOTCH2-206ENST00000579475 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
NOTCH2-206ENST00000579475 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
NOTCH2-206ENST00000579475 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
NOTCH2-206ENST00000579475 MYOM3Q5VTT5 1437 aa11.31□□□□□ -0.6
NOTCH2-206ENST00000579475 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
NOTCH2-206ENST00000579475 MTUS2Q5JR59 1369 aa11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 AKNAQ7Z591 1439 aa11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 HSPA5P11021 654 aaKnown RBP11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
NOTCH2-206ENST00000579475 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
NOTCH2-206ENST00000579475 ATP1B4Q9UN42 357 aaPredicted RBP11.29□□□□□ -0.6
NOTCH2-206ENST00000579475 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
NOTCH2-206ENST00000579475 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
NOTCH2-206ENST00000579475 EHBP1L1Q8N3D4 1523 aa11.28□□□□□ -0.6
NOTCH2-206ENST00000579475 ABCA10Q8WWZ4 1543 aa11.28□□□□□ -0.6
NOTCH2-206ENST00000579475 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
NOTCH2-206ENST00000579475 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
NOTCH2-206ENST00000579475 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.61
NOTCH2-206ENST00000579475 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
NOTCH2-206ENST00000579475 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
NOTCH2-206ENST00000579475 SAMD9Q5K651 1589 aa11.25□□□□□ -0.61
NOTCH2-206ENST00000579475 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
NOTCH2-206ENST00000579475 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
NOTCH2-206ENST00000579475 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
NOTCH2-206ENST00000579475 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 UGGT2Q9NYU1 1516 aa11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 MRS2Q9HD23 443 aa11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 GRIN2BQ13224 1484 aa11.24□□□□□ -0.61
NOTCH2-206ENST00000579475 LRRIQ1Q96JM4 1722 aa11.22□□□□□ -0.61
NOTCH2-206ENST00000579475 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
NOTCH2-206ENST00000579475 DENND4BO75064 1496 aaPredicted RBP11.22□□□□□ -0.61
NOTCH2-206ENST00000579475 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
NOTCH2-206ENST00000579475 CCDC184Q52MB2 194 aa11.21□□□□□ -0.62
NOTCH2-206ENST00000579475 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.62
NOTCH2-206ENST00000579475 IPO9Q96P70 1041 aaKnown RBP11.21□□□□□ -0.62
NOTCH2-206ENST00000579475 NBR1Q14596 966 aa11.19□□□□□ -0.62
NOTCH2-206ENST00000579475 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
NOTCH2-206ENST00000579475 SPATA31E1Q6ZUB1 1445 aa11.18□□□□□ -0.62
NOTCH2-206ENST00000579475 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
NOTCH2-206ENST00000579475 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
NOTCH2-206ENST00000579475 PAK3O75914 559 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms