RNA–Protein interactions for RNA: ENST00000578619.1

GAREM1-203, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

TSL 4

Gene GAREM1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-203ENST00000578619 RSF1Q96T23 1441 aaPredicted RBP9.15□□□□□ -0.94
GAREM1-203ENST00000578619 SYNJ2O15056 1496 aa9.14□□□□□ -0.95
GAREM1-203ENST00000578619 MKRN4PQ13434 485 aaPredicted RBP9.13□□□□□ -0.95
GAREM1-203ENST00000578619 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
GAREM1-203ENST00000578619 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
GAREM1-203ENST00000578619 SPDYE2Q495Y8 402 aa9.1□□□□□ -0.95
GAREM1-203ENST00000578619 CHRDL2Q6WN34 429 aa9.09□□□□□ -0.95
GAREM1-203ENST00000578619 BAZ1BQ9UIG0 1483 aaKnown RBP9.08□□□□□ -0.96
GAREM1-203ENST00000578619 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
GAREM1-203ENST00000578619 SPATA31D1Q6ZQQ2 1576 aa9.08□□□□□ -0.96
GAREM1-203ENST00000578619 REM2Q8IYK8 340 aaPredicted RBP9.08□□□□□ -0.96
GAREM1-203ENST00000578619 ZNF608Q9ULD9 1512 aaPredicted RBP9.08□□□□□ -0.96
GAREM1-203ENST00000578619 CHD1O14646 1710 aa9.07□□□□□ -0.96
GAREM1-203ENST00000578619 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
GAREM1-203ENST00000578619 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
GAREM1-203ENST00000578619 ADGRL1O94910 1474 aa9.04□□□□□ -0.96
GAREM1-203ENST00000578619 CADPSQ9ULU8 1353 aa9.04□□□□□ -0.96
GAREM1-203ENST00000578619 ZCCHC6Q5VYS8 1495 aaKnown RBP9.01□□□□□ -0.97
GAREM1-203ENST00000578619 ZNF692Q9BU19 519 aaPredicted RBP8.99□□□□□ -0.97
GAREM1-203ENST00000578619 SSUH2Q9Y2M2 353 aa8.99□□□□□ -0.97
GAREM1-203ENST00000578619 URB2Q14146 1524 aaKnown RBP8.99□□□□□ -0.97
GAREM1-203ENST00000578619 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
GAREM1-203ENST00000578619 KIF13AQ9H1H9 1805 aa8.98□□□□□ -0.97
GAREM1-203ENST00000578619 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
GAREM1-203ENST00000578619 KDM6BO15054 1643 aa8.96□□□□□ -0.98
GAREM1-203ENST00000578619 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.98
GAREM1-203ENST00000578619 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
GAREM1-203ENST00000578619 CLASP1Q7Z460 1538 aa8.93□□□□□ -0.98
GAREM1-203ENST00000578619 IFT140Q96RY7 1462 aa8.91□□□□□ -0.98
GAREM1-203ENST00000578619 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.98
GAREM1-203ENST00000578619 SPDYE1Q8NFV5 336 aaPredicted RBP8.9□□□□□ -0.98
GAREM1-203ENST00000578619 FXR2P51116 673 aaKnown RBP eCLIP8.88□□□□□ -0.99
GAREM1-203ENST00000578619 FAM69CQ0P6D2 419 aa8.87□□□□□ -0.99
GAREM1-203ENST00000578619 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
GAREM1-203ENST00000578619 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
GAREM1-203ENST00000578619 CERKQ8TCT0 537 aa8.83□□□□□ -1
GAREM1-203ENST00000578619 SYNJ1O43426 1573 aa8.81□□□□□ -1
GAREM1-203ENST00000578619 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
GAREM1-203ENST00000578619 ABCC10Q5T3U5 1492 aa8.78□□□□□ -1
GAREM1-203ENST00000578619 SPDYE4A6NLX3 237 aa8.78□□□□□ -1
GAREM1-203ENST00000578619 TSPOAP1O95153 1857 aa8.77□□□□□ -1.01
GAREM1-203ENST00000578619 DIP2BQ9P265 1576 aa8.75□□□□□ -1.01
GAREM1-203ENST00000578619 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
GAREM1-203ENST00000578619 PRKAR2AP13861 404 aaKnown RBP8.74□□□□□ -1.01
GAREM1-203ENST00000578619 CHMP7Q8WUX9 453 aaPredicted RBP8.74□□□□□ -1.01
GAREM1-203ENST00000578619 SNAPC4Q5SXM2 1469 aa8.73□□□□□ -1.01
GAREM1-203ENST00000578619 CFTRP13569 1480 aa8.7□□□□□ -1.02
GAREM1-203ENST00000578619 HAX1O00165 279 aa8.69□□□□□ -1.02
GAREM1-203ENST00000578619 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
GAREM1-203ENST00000578619 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
GAREM1-203ENST00000578619 MROH2BQ7Z745 1585 aa8.67□□□□□ -1.02
GAREM1-203ENST00000578619 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
GAREM1-203ENST00000578619 TARBP1Q13395 1621 aaKnown RBP8.66□□□□□ -1.02
GAREM1-203ENST00000578619 CHADLQ6NUI6 762 aa8.66□□□□□ -1.02
GAREM1-203ENST00000578619 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
GAREM1-203ENST00000578619 PCF11O94913 1555 aaKnown RBP8.64□□□□□ -1.03
GAREM1-203ENST00000578619 TDRD9Q8NDG6 1382 aaKnown RBP8.63□□□□□ -1.03
GAREM1-203ENST00000578619 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
GAREM1-203ENST00000578619 PROM2Q8N271 834 aa8.62□□□□□ -1.03
GAREM1-203ENST00000578619 HSPA2P54652 639 aa8.61□□□□□ -1.03
GAREM1-203ENST00000578619 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
GAREM1-203ENST00000578619 NPM1P06748 294 aaKnown RBP eCLIP8.6□□□□□ -1.03
GAREM1-203ENST00000578619 CEP170Q5SW79 1584 aa8.6□□□□□ -1.03
GAREM1-203ENST00000578619 C19orf67A6NJJ6 358 aa8.59□□□□□ -1.03
GAREM1-203ENST00000578619 EVX2Q03828 476 aa8.59□□□□□ -1.03
GAREM1-203ENST00000578619 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
GAREM1-203ENST00000578619 PTPRMP28827 1452 aa8.57□□□□□ -1.04
GAREM1-203ENST00000578619 RAD54L2Q9Y4B4 1467 aa8.57□□□□□ -1.04
GAREM1-203ENST00000578619 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
GAREM1-203ENST00000578619 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
GAREM1-203ENST00000578619 MED1Q15648 1581 aaPredicted RBP8.55□□□□□ -1.04
GAREM1-203ENST00000578619 PPRC1Q5VV67 1664 aaKnown RBP8.54□□□□□ -1.04
GAREM1-203ENST00000578619 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
GAREM1-203ENST00000578619 POLA1P09884 1462 aaPredicted RBP8.53□□□□□ -1.04
GAREM1-203ENST00000578619 ABCC8Q09428 1581 aa8.5□□□□□ -1.05
GAREM1-203ENST00000578619 KIF21BO75037 1637 aa8.5□□□□□ -1.05
GAREM1-203ENST00000578619 GRIN2BQ13224 1484 aa8.5□□□□□ -1.05
GAREM1-203ENST00000578619 ADCY10Q96PN6 1610 aa8.49□□□□□ -1.05
GAREM1-203ENST00000578619 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
GAREM1-203ENST00000578619 CD44P16070 742 aaKnown RBP8.47□□□□□ -1.05
GAREM1-203ENST00000578619 FKBP8Q14318 412 aa8.47□□□□□ -1.05
GAREM1-203ENST00000578619 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
GAREM1-203ENST00000578619 WIZO95785 1651 aa8.46□□□□□ -1.05
GAREM1-203ENST00000578619 SOGA1O94964 1423 aa8.46□□□□□ -1.05
GAREM1-203ENST00000578619 PRG4Q92954 1404 aaPredicted RBP8.45□□□□□ -1.06
GAREM1-203ENST00000578619 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
GAREM1-203ENST00000578619 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
GAREM1-203ENST00000578619 GABBR2O75899 941 aa8.42□□□□□ -1.06
GAREM1-203ENST00000578619 WDR97A6NE52 1622 aa8.42□□□□□ -1.06
GAREM1-203ENST00000578619 GRIN2AQ12879 1464 aa8.4□□□□□ -1.06
GAREM1-203ENST00000578619 PBRM1Q86U86 1689 aa8.4□□□□□ -1.07
GAREM1-203ENST00000578619 MADDQ8WXG6 1647 aa8.4□□□□□ -1.07
GAREM1-203ENST00000578619 NUP160Q12769 1436 aa8.39□□□□□ -1.07
GAREM1-203ENST00000578619 CLCN6P51797 869 aa8.38□□□□□ -1.07
GAREM1-203ENST00000578619 GLI2P10070 1586 aa8.38□□□□□ -1.07
GAREM1-203ENST00000578619 TEX14Q8IWB6 1497 aa8.38□□□□□ -1.07
GAREM1-203ENST00000578619 UBAP1LF5GYI3 381 aa8.37□□□□□ -1.07
GAREM1-203ENST00000578619 IFFO2Q5TF58 517 aa8.37□□□□□ -1.07
GAREM1-203ENST00000578619 ZNF579Q8NAF0 562 aaKnown RBP8.37□□□□□ -1.07
GAREM1-203ENST00000578619 ZRANB1Q9UGI0 708 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms