RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
TVP23A-205ENST00000572428 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
TVP23A-205ENST00000572428 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
TVP23A-205ENST00000572428 CUL7Q14999 1698 aa13.77□□□□□ -0.21
TVP23A-205ENST00000572428 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.21
TVP23A-205ENST00000572428 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
TVP23A-205ENST00000572428 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
TVP23A-205ENST00000572428 GAPVD1Q14C86 1478 aa13.71□□□□□ -0.21
TVP23A-205ENST00000572428 IGF1RP08069 1367 aa13.7□□□□□ -0.22
TVP23A-205ENST00000572428 HRCP23327 699 aa13.69□□□□□ -0.22
TVP23A-205ENST00000572428 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
TVP23A-205ENST00000572428 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
TVP23A-205ENST00000572428 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
TVP23A-205ENST00000572428 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
TVP23A-205ENST00000572428 GRIN2BQ13224 1484 aa13.66□□□□□ -0.22
TVP23A-205ENST00000572428 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.23
TVP23A-205ENST00000572428 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
TVP23A-205ENST00000572428 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.23
TVP23A-205ENST00000572428 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
TVP23A-205ENST00000572428 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
TVP23A-205ENST00000572428 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
TVP23A-205ENST00000572428 CARMIL1Q5VZK9 1371 aa13.6□□□□□ -0.23
TVP23A-205ENST00000572428 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
TVP23A-205ENST00000572428 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.23
TVP23A-205ENST00000572428 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
TVP23A-205ENST00000572428 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
TVP23A-205ENST00000572428 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
TVP23A-205ENST00000572428 CENPBP07199 599 aaPredicted RBP13.54□□□□□ -0.24
TVP23A-205ENST00000572428 SYNJ2O15056 1496 aa13.52□□□□□ -0.24
TVP23A-205ENST00000572428 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.25
TVP23A-205ENST00000572428 CHD1O14646 1710 aa13.5□□□□□ -0.25
TVP23A-205ENST00000572428 PDE4CQ08493 712 aa13.5□□□□□ -0.25
TVP23A-205ENST00000572428 GTF3C3Q9Y5Q9 886 aa13.5□□□□□ -0.25
TVP23A-205ENST00000572428 GRIN2AQ12879 1464 aa13.49□□□□□ -0.25
TVP23A-205ENST00000572428 BCANQ96GW7 911 aa13.48□□□□□ -0.25
TVP23A-205ENST00000572428 C14orf37Q86TY3 774 aa13.47□□□□□ -0.25
TVP23A-205ENST00000572428 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
TVP23A-205ENST00000572428 NUP160Q12769 1436 aa13.45□□□□□ -0.26
TVP23A-205ENST00000572428 CEP162Q5TB80 1403 aa13.45□□□□□ -0.26
TVP23A-205ENST00000572428 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
TVP23A-205ENST00000572428 SAMD9Q5K651 1589 aa13.44□□□□□ -0.26
TVP23A-205ENST00000572428 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
TVP23A-205ENST00000572428 EFCAB5A4FU69 1503 aa13.42□□□□□ -0.26
TVP23A-205ENST00000572428 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
TVP23A-205ENST00000572428 UGGT2Q9NYU1 1516 aa13.4□□□□□ -0.26
TVP23A-205ENST00000572428 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
TVP23A-205ENST00000572428 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
TVP23A-205ENST00000572428 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
TVP23A-205ENST00000572428 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
TVP23A-205ENST00000572428 CLIP1P30622 1438 aa13.37□□□□□ -0.27
TVP23A-205ENST00000572428 ARHGAP35Q9NRY4 1499 aa13.37□□□□□ -0.27
TVP23A-205ENST00000572428 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
TVP23A-205ENST00000572428 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
TVP23A-205ENST00000572428 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
TVP23A-205ENST00000572428 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
TVP23A-205ENST00000572428 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
TVP23A-205ENST00000572428 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
TVP23A-205ENST00000572428 CHMP7Q8WUX9 453 aaPredicted RBP13.33□□□□□ -0.28
TVP23A-205ENST00000572428 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
TVP23A-205ENST00000572428 ANP32EQ9BTT0 268 aa13.31□□□□□ -0.28
TVP23A-205ENST00000572428 DISP1Q96F81 1524 aa13.3□□□□□ -0.28
TVP23A-205ENST00000572428 VPS8Q8N3P4 1428 aa13.29□□□□□ -0.28
TVP23A-205ENST00000572428 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
TVP23A-205ENST00000572428 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
TVP23A-205ENST00000572428 NEFLP07196 543 aa13.27□□□□□ -0.29
TVP23A-205ENST00000572428 LRRIQ1Q96JM4 1722 aa13.23□□□□□ -0.29
TVP23A-205ENST00000572428 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
TVP23A-205ENST00000572428 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
TVP23A-205ENST00000572428 FGD1P98174 961 aa13.21□□□□□ -0.29
TVP23A-205ENST00000572428 FMN1Q68DA7 1419 aa13.21□□□□□ -0.29
TVP23A-205ENST00000572428 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.3
TVP23A-205ENST00000572428 FBLN2P98095 1184 aa13.2□□□□□ -0.3
TVP23A-205ENST00000572428 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
TVP23A-205ENST00000572428 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
TVP23A-205ENST00000572428 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
TVP23A-205ENST00000572428 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
TVP23A-205ENST00000572428 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
TVP23A-205ENST00000572428 TAF7LQ5H9L4 462 aa13.17□□□□□ -0.3
TVP23A-205ENST00000572428 ZBTB22O15209 634 aa13.16□□□□□ -0.3
TVP23A-205ENST00000572428 RAPGEF6Q8TEU7 1601 aa13.16□□□□□ -0.3
TVP23A-205ENST00000572428 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
TVP23A-205ENST00000572428 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
TVP23A-205ENST00000572428 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
TVP23A-205ENST00000572428 ABCA8O94911 1581 aa13.15□□□□□ -0.3
TVP23A-205ENST00000572428 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.3
TVP23A-205ENST00000572428 SALL2Q9Y467 1007 aaPredicted RBP13.14□□□□□ -0.31
TVP23A-205ENST00000572428 TIAM1Q13009 1591 aa13.14□□□□□ -0.31
TVP23A-205ENST00000572428 PPARGC1BQ86YN6 1023 aaKnown RBP13.14□□□□□ -0.31
TVP23A-205ENST00000572428 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
TVP23A-205ENST00000572428 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
TVP23A-205ENST00000572428 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
TVP23A-205ENST00000572428 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
TVP23A-205ENST00000572428 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
TVP23A-205ENST00000572428 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
TVP23A-205ENST00000572428 UHRF1BP1LA0JNW5 1464 aa13.07□□□□□ -0.32
TVP23A-205ENST00000572428 NUP153P49790 1475 aaKnown RBP13.07□□□□□ -0.32
TVP23A-205ENST00000572428 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
TVP23A-205ENST00000572428 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
TVP23A-205ENST00000572428 A0A0U1RQG5 324 aaPredicted RBP13.05□□□□□ -0.32
TVP23A-205ENST00000572428 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms