RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 ABCA10Q8WWZ4 1543 aa15.6■□□□□ 0.09
LINC01654-201ENST00000569711 CUL7Q14999 1698 aa15.58■□□□□ 0.09
LINC01654-201ENST00000569711 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.08
LINC01654-201ENST00000569711 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC01654-201ENST00000569711 FYCO1Q9BQS8 1478 aa15.55■□□□□ 0.08
LINC01654-201ENST00000569711 SETD5Q9C0A6 1442 aa15.55■□□□□ 0.08
LINC01654-201ENST00000569711 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
LINC01654-201ENST00000569711 YTHDC1Q96MU7 727 aaKnown RBP15.53■□□□□ 0.08
LINC01654-201ENST00000569711 TIMELESSQ9UNS1 1208 aa15.52■□□□□ 0.08
LINC01654-201ENST00000569711 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
LINC01654-201ENST00000569711 PCF11O94913 1555 aaKnown RBP15.51■□□□□ 0.07
LINC01654-201ENST00000569711 CASKIN1Q8WXD9 1431 aa15.51■□□□□ 0.07
LINC01654-201ENST00000569711 MAPKBP1O60336 1514 aa15.5■□□□□ 0.07
LINC01654-201ENST00000569711 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
LINC01654-201ENST00000569711 CTTNBP2Q8WZ74 1663 aa15.49■□□□□ 0.07
LINC01654-201ENST00000569711 PHLDB1Q86UU1 1377 aa15.48■□□□□ 0.07
LINC01654-201ENST00000569711 FMN1Q68DA7 1419 aa15.47■□□□□ 0.07
LINC01654-201ENST00000569711 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
LINC01654-201ENST00000569711 WDR97A6NE52 1622 aa15.44■□□□□ 0.06
LINC01654-201ENST00000569711 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
LINC01654-201ENST00000569711 MYT1Q01538 1121 aa15.42■□□□□ 0.06
LINC01654-201ENST00000569711 ITGAEP38570 1179 aa15.41■□□□□ 0.06
LINC01654-201ENST00000569711 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
LINC01654-201ENST00000569711 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
LINC01654-201ENST00000569711 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
LINC01654-201ENST00000569711 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
LINC01654-201ENST00000569711 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
LINC01654-201ENST00000569711 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
LINC01654-201ENST00000569711 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
LINC01654-201ENST00000569711 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
LINC01654-201ENST00000569711 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
LINC01654-201ENST00000569711 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
LINC01654-201ENST00000569711 NESP48681 1621 aa15.32■□□□□ 0.04
LINC01654-201ENST00000569711 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
LINC01654-201ENST00000569711 P3H3Q8IVL6 736 aa15.31■□□□□ 0.04
LINC01654-201ENST00000569711 HFM1A2PYH4 1435 aa15.31■□□□□ 0.04
LINC01654-201ENST00000569711 MTUS2Q5JR59 1369 aa15.3■□□□□ 0.04
LINC01654-201ENST00000569711 EHBP1L1Q8N3D4 1523 aa15.3■□□□□ 0.04
LINC01654-201ENST00000569711 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
LINC01654-201ENST00000569711 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
LINC01654-201ENST00000569711 SUPT6HQ7KZ85 1726 aaKnown RBP15.28■□□□□ 0.04
LINC01654-201ENST00000569711 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
LINC01654-201ENST00000569711 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
LINC01654-201ENST00000569711 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
LINC01654-201ENST00000569711 PPP1R15AO75807 674 aaPredicted RBP15.25■□□□□ 0.03
LINC01654-201ENST00000569711 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
LINC01654-201ENST00000569711 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
LINC01654-201ENST00000569711 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
LINC01654-201ENST00000569711 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
LINC01654-201ENST00000569711 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
LINC01654-201ENST00000569711 UGGT2Q9NYU1 1516 aa15.22■□□□□ 0.03
LINC01654-201ENST00000569711 TARBP1Q13395 1621 aaKnown RBP15.21■□□□□ 0.03
LINC01654-201ENST00000569711 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
LINC01654-201ENST00000569711 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
LINC01654-201ENST00000569711 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
LINC01654-201ENST00000569711 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.03
LINC01654-201ENST00000569711 TONSLQ96HA7 1378 aa15.21■□□□□ 0.03
LINC01654-201ENST00000569711 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
LINC01654-201ENST00000569711 HECW1Q76N89 1606 aa15.2■□□□□ 0.02
LINC01654-201ENST00000569711 NAIPQ13075 1403 aa15.19■□□□□ 0.02
LINC01654-201ENST00000569711 PTPRKQ15262 1439 aa15.16■□□□□ 0.02
LINC01654-201ENST00000569711 MIA2Q96PC5 1412 aa15.16■□□□□ 0.02
LINC01654-201ENST00000569711 PBRM1Q86U86 1689 aa15.15■□□□□ 0.02
LINC01654-201ENST00000569711 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
LINC01654-201ENST00000569711 IQGAP2Q13576 1575 aa15.15■□□□□ 0.02
LINC01654-201ENST00000569711 DDX10Q13206 875 aaKnown RBP15.15■□□□□ 0.02
LINC01654-201ENST00000569711 ANP32CO43423 234 aa15.13■□□□□ 0.01
LINC01654-201ENST00000569711 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
LINC01654-201ENST00000569711 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
LINC01654-201ENST00000569711 MAGI3Q5TCQ9 1506 aa15.09■□□□□ 0.01
LINC01654-201ENST00000569711 WDR62O43379 1518 aa15.07■□□□□ 0
LINC01654-201ENST00000569711 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
LINC01654-201ENST00000569711 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
LINC01654-201ENST00000569711 ROCK1Q13464 1354 aa15.05■□□□□ -0
LINC01654-201ENST00000569711 KCNH8Q96L42 1107 aa15.04■□□□□ -0
LINC01654-201ENST00000569711 IFT140Q96RY7 1462 aa15.03■□□□□ -0
LINC01654-201ENST00000569711 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
LINC01654-201ENST00000569711 NEFLP07196 543 aa15□□□□□ -0.01
LINC01654-201ENST00000569711 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
LINC01654-201ENST00000569711 DNMT1P26358 1616 aaKnown RBP14.97□□□□□ -0.01
LINC01654-201ENST00000569711 DENND4BO75064 1496 aaPredicted RBP14.97□□□□□ -0.01
LINC01654-201ENST00000569711 CDK13Q14004 1512 aaKnown RBP14.97□□□□□ -0.01
LINC01654-201ENST00000569711 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
LINC01654-201ENST00000569711 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
LINC01654-201ENST00000569711 DAPK1P53355 1430 aa14.95□□□□□ -0.02
LINC01654-201ENST00000569711 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
LINC01654-201ENST00000569711 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
LINC01654-201ENST00000569711 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
LINC01654-201ENST00000569711 RAPGEF6Q8TEU7 1601 aa14.94□□□□□ -0.02
LINC01654-201ENST00000569711 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
LINC01654-201ENST00000569711 HIRIP3Q9BW71 556 aaPredicted RBP14.93□□□□□ -0.02
LINC01654-201ENST00000569711 DISP1Q96F81 1524 aa14.93□□□□□ -0.02
LINC01654-201ENST00000569711 FKBP8Q14318 412 aa14.92□□□□□ -0.02
LINC01654-201ENST00000569711 RPRD2Q5VT52 1461 aaKnown RBP14.92□□□□□ -0.02
LINC01654-201ENST00000569711 KDM6BO15054 1643 aa14.91□□□□□ -0.02
LINC01654-201ENST00000569711 NUP153P49790 1475 aaKnown RBP14.9□□□□□ -0.02
LINC01654-201ENST00000569711 CHIC2Q9UKJ5 165 aa14.9□□□□□ -0.02
LINC01654-201ENST00000569711 ABCC5O15440 1437 aa14.9□□□□□ -0.02
LINC01654-201ENST00000569711 GRIN2AQ12879 1464 aa14.9□□□□□ -0.02
LINC01654-201ENST00000569711 ANKRD30BQ9BXX2 1392 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms