RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
SPG7-220ENST00000569363 LAMC3Q9Y6N6 1575 aa11.75□□□□□ -0.53
SPG7-220ENST00000569363 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
SPG7-220ENST00000569363 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
SPG7-220ENST00000569363 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
SPG7-220ENST00000569363 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
SPG7-220ENST00000569363 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
SPG7-220ENST00000569363 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
SPG7-220ENST00000569363 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
SPG7-220ENST00000569363 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
SPG7-220ENST00000569363 MIER1Q8N108 512 aa11.68□□□□□ -0.54
SPG7-220ENST00000569363 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
SPG7-220ENST00000569363 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
SPG7-220ENST00000569363 LRRC9Q6ZRR7 1453 aa11.67□□□□□ -0.54
SPG7-220ENST00000569363 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
SPG7-220ENST00000569363 CUL7Q14999 1698 aa11.66□□□□□ -0.54
SPG7-220ENST00000569363 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
SPG7-220ENST00000569363 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.544e-6■■■□□ 18.7
SPG7-220ENST00000569363 FYCO1Q9BQS8 1478 aa11.63□□□□□ -0.55
SPG7-220ENST00000569363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.63□□□□□ -0.55
SPG7-220ENST00000569363 SETD5Q9C0A6 1442 aa11.62□□□□□ -0.55
SPG7-220ENST00000569363 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
SPG7-220ENST00000569363 CASKIN1Q8WXD9 1431 aa11.6□□□□□ -0.55
SPG7-220ENST00000569363 PCF11O94913 1555 aaKnown RBP11.6□□□□□ -0.55
SPG7-220ENST00000569363 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
SPG7-220ENST00000569363 YTHDC1Q96MU7 727 aaKnown RBP11.6□□□□□ -0.55
SPG7-220ENST00000569363 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
SPG7-220ENST00000569363 WDR62O43379 1518 aa11.6□□□□□ -0.55
SPG7-220ENST00000569363 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
SPG7-220ENST00000569363 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
SPG7-220ENST00000569363 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
SPG7-220ENST00000569363 FMN1Q68DA7 1419 aa11.58□□□□□ -0.56
SPG7-220ENST00000569363 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
SPG7-220ENST00000569363 PHLDB1Q86UU1 1377 aa11.55□□□□□ -0.56
SPG7-220ENST00000569363 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
SPG7-220ENST00000569363 MRC2Q9UBG0 1479 aa11.55□□□□□ -0.56
SPG7-220ENST00000569363 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
SPG7-220ENST00000569363 ITGAEP38570 1179 aa11.54□□□□□ -0.56
SPG7-220ENST00000569363 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.56
SPG7-220ENST00000569363 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
SPG7-220ENST00000569363 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
SPG7-220ENST00000569363 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
SPG7-220ENST00000569363 PDS5BQ9NTI5 1447 aa11.51□□□□□ -0.57
SPG7-220ENST00000569363 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
SPG7-220ENST00000569363 MYT1Q01538 1121 aa11.49□□□□□ -0.57
SPG7-220ENST00000569363 FGD6Q6ZV73 1430 aa11.48□□□□□ -0.57
SPG7-220ENST00000569363 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
SPG7-220ENST00000569363 GAPVD1Q14C86 1478 aa11.47□□□□□ -0.57
SPG7-220ENST00000569363 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
SPG7-220ENST00000569363 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
SPG7-220ENST00000569363 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SPG7-220ENST00000569363 MTUS2Q5JR59 1369 aa11.45□□□□□ -0.58
SPG7-220ENST00000569363 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
SPG7-220ENST00000569363 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
SPG7-220ENST00000569363 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
SPG7-220ENST00000569363 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
SPG7-220ENST00000569363 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
SPG7-220ENST00000569363 UACAQ9BZF9 1416 aa11.42□□□□□ -0.58
SPG7-220ENST00000569363 NCOA2Q15596 1464 aa11.4□□□□□ -0.58
SPG7-220ENST00000569363 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
SPG7-220ENST00000569363 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.59
SPG7-220ENST00000569363 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
SPG7-220ENST00000569363 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
SPG7-220ENST00000569363 HECW1Q76N89 1606 aa11.38□□□□□ -0.59
SPG7-220ENST00000569363 SIN3AQ96ST3 1273 aa11.38□□□□□ -0.59
SPG7-220ENST00000569363 ARHGEF11O15085 1522 aa11.38□□□□□ -0.59
SPG7-220ENST00000569363 UGGT2Q9NYU1 1516 aa11.38□□□□□ -0.59
SPG7-220ENST00000569363 TONSLQ96HA7 1378 aa11.38□□□□□ -0.59
SPG7-220ENST00000569363 AKNAQ7Z591 1439 aa11.37□□□□□ -0.59
SPG7-220ENST00000569363 TCOF1Q13428 1488 aaKnown RBP11.37□□□□□ -0.59
SPG7-220ENST00000569363 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
SPG7-220ENST00000569363 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
SPG7-220ENST00000569363 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
SPG7-220ENST00000569363 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
SPG7-220ENST00000569363 NAIPQ13075 1403 aa11.35□□□□□ -0.59
SPG7-220ENST00000569363 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
SPG7-220ENST00000569363 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
SPG7-220ENST00000569363 MIA2Q96PC5 1412 aa11.34□□□□□ -0.59
SPG7-220ENST00000569363 ADAMTS12P58397 1594 aa11.33□□□□□ -0.6
SPG7-220ENST00000569363 ZNF608Q9ULD9 1512 aaPredicted RBP11.33□□□□□ -0.6
SPG7-220ENST00000569363 ANP32CO43423 234 aa11.32□□□□□ -0.6
SPG7-220ENST00000569363 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
SPG7-220ENST00000569363 GCC2Q8IWJ2 1684 aa11.32□□□□□ -0.6
SPG7-220ENST00000569363 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
SPG7-220ENST00000569363 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
SPG7-220ENST00000569363 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
SPG7-220ENST00000569363 CHD1O14646 1710 aa11.28□□□□□ -0.6
SPG7-220ENST00000569363 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
SPG7-220ENST00000569363 MAGI3Q5TCQ9 1506 aa11.27□□□□□ -0.61
SPG7-220ENST00000569363 ROCK1Q13464 1354 aa11.25□□□□□ -0.61
SPG7-220ENST00000569363 KIAA0586Q9BVV6 1533 aa11.24□□□□□ -0.61
SPG7-220ENST00000569363 NEFLP07196 543 aa11.23□□□□□ -0.61
SPG7-220ENST00000569363 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
SPG7-220ENST00000569363 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
SPG7-220ENST00000569363 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
SPG7-220ENST00000569363 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
SPG7-220ENST00000569363 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
SPG7-220ENST00000569363 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
SPG7-220ENST00000569363 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
SPG7-220ENST00000569363 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms