RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
TCF4-241ENST00000568740 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
TCF4-241ENST00000568740 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
TCF4-241ENST00000568740 PRDM2Q13029 1718 aa13.27□□□□□ -0.29
TCF4-241ENST00000568740 CLIP1P30622 1438 aa13.27□□□□□ -0.29
TCF4-241ENST00000568740 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
TCF4-241ENST00000568740 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
TCF4-241ENST00000568740 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
TCF4-241ENST00000568740 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
TCF4-241ENST00000568740 KIF21BO75037 1637 aa13.22□□□□□ -0.29
TCF4-241ENST00000568740 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
TCF4-241ENST00000568740 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
TCF4-241ENST00000568740 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
TCF4-241ENST00000568740 HRCP23327 699 aa13.15□□□□□ -0.3
TCF4-241ENST00000568740 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TCF4-241ENST00000568740 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
TCF4-241ENST00000568740 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
TCF4-241ENST00000568740 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
TCF4-241ENST00000568740 FBLN2P98095 1184 aa13.1□□□□□ -0.31
TCF4-241ENST00000568740 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
TCF4-241ENST00000568740 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
TCF4-241ENST00000568740 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
TCF4-241ENST00000568740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
TCF4-241ENST00000568740 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
TCF4-241ENST00000568740 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
TCF4-241ENST00000568740 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
TCF4-241ENST00000568740 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
TCF4-241ENST00000568740 TMEM132AQ24JP5 1023 aa13.06□□□□□ -0.32
TCF4-241ENST00000568740 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
TCF4-241ENST00000568740 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
TCF4-241ENST00000568740 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
TCF4-241ENST00000568740 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.33
TCF4-241ENST00000568740 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.33
TCF4-241ENST00000568740 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
TCF4-241ENST00000568740 ITGAEP38570 1179 aa13□□□□□ -0.33
TCF4-241ENST00000568740 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
TCF4-241ENST00000568740 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
TCF4-241ENST00000568740 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
TCF4-241ENST00000568740 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
TCF4-241ENST00000568740 CCER1Q8TC90 406 aaPredicted RBP12.96□□□□□ -0.33
TCF4-241ENST00000568740 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
TCF4-241ENST00000568740 WDR62O43379 1518 aa12.95□□□□□ -0.34
TCF4-241ENST00000568740 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
TCF4-241ENST00000568740 EIF5BO60841 1220 aaKnown RBP12.92□□□□□ -0.34
TCF4-241ENST00000568740 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
TCF4-241ENST00000568740 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
TCF4-241ENST00000568740 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
TCF4-241ENST00000568740 CUL7Q14999 1698 aa12.9□□□□□ -0.35
TCF4-241ENST00000568740 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
TCF4-241ENST00000568740 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
TCF4-241ENST00000568740 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
TCF4-241ENST00000568740 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
TCF4-241ENST00000568740 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
TCF4-241ENST00000568740 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
TCF4-241ENST00000568740 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
TCF4-241ENST00000568740 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
TCF4-241ENST00000568740 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
TCF4-241ENST00000568740 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
TCF4-241ENST00000568740 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
TCF4-241ENST00000568740 LRRC9Q6ZRR7 1453 aa12.76□□□□□ -0.37
TCF4-241ENST00000568740 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
TCF4-241ENST00000568740 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
TCF4-241ENST00000568740 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
TCF4-241ENST00000568740 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
TCF4-241ENST00000568740 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
TCF4-241ENST00000568740 CCNB3Q8WWL7 1395 aa12.74□□□□□ -0.37
TCF4-241ENST00000568740 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
TCF4-241ENST00000568740 SYNJ2O15056 1496 aa12.73□□□□□ -0.37
TCF4-241ENST00000568740 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
TCF4-241ENST00000568740 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
TCF4-241ENST00000568740 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.37
TCF4-241ENST00000568740 CEP170Q5SW79 1584 aa12.71□□□□□ -0.37
TCF4-241ENST00000568740 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
TCF4-241ENST00000568740 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
TCF4-241ENST00000568740 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
TCF4-241ENST00000568740 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
TCF4-241ENST00000568740 FYCO1Q9BQS8 1478 aa12.7□□□□□ -0.38
TCF4-241ENST00000568740 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
TCF4-241ENST00000568740 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
TCF4-241ENST00000568740 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
TCF4-241ENST00000568740 PLB1Q6P1J6 1458 aa12.67□□□□□ -0.38
TCF4-241ENST00000568740 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
TCF4-241ENST00000568740 LRRIQ1Q96JM4 1722 aa12.65□□□□□ -0.38
TCF4-241ENST00000568740 MAGI3Q5TCQ9 1506 aa12.65□□□□□ -0.39
TCF4-241ENST00000568740 UGGT2Q9NYU1 1516 aa12.63□□□□□ -0.39
TCF4-241ENST00000568740 NUP160Q12769 1436 aa12.63□□□□□ -0.39
TCF4-241ENST00000568740 PRG4Q92954 1404 aaPredicted RBP12.62□□□□□ -0.39
TCF4-241ENST00000568740 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
TCF4-241ENST00000568740 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
TCF4-241ENST00000568740 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
TCF4-241ENST00000568740 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
TCF4-241ENST00000568740 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
TCF4-241ENST00000568740 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
TCF4-241ENST00000568740 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
TCF4-241ENST00000568740 CFAP43Q8NDM7 1665 aa12.59□□□□□ -0.39
TCF4-241ENST00000568740 RAB3GAP2Q9H2M9 1393 aa12.59□□□□□ -0.39
TCF4-241ENST00000568740 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
TCF4-241ENST00000568740 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.39
TCF4-241ENST00000568740 CARMIL2Q6F5E8 1435 aa12.58□□□□□ -0.4
TCF4-241ENST00000568740 FGD6Q6ZV73 1430 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms