RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
TCF4-240ENST00000568673 LRRC9Q6ZRR7 1453 aa14.3□□□□□ -0.12
TCF4-240ENST00000568673 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
TCF4-240ENST00000568673 EFCAB5A4FU69 1503 aa14.3□□□□□ -0.12
TCF4-240ENST00000568673 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
TCF4-240ENST00000568673 P3H3Q8IVL6 736 aa14.29□□□□□ -0.12
TCF4-240ENST00000568673 TDRD9Q8NDG6 1382 aaKnown RBP14.28□□□□□ -0.12
TCF4-240ENST00000568673 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
TCF4-240ENST00000568673 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
TCF4-240ENST00000568673 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
TCF4-240ENST00000568673 FHOD3Q2V2M9 1422 aa14.26□□□□□ -0.13
TCF4-240ENST00000568673 PCF11O94913 1555 aaKnown RBP14.25□□□□□ -0.13
TCF4-240ENST00000568673 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
TCF4-240ENST00000568673 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
TCF4-240ENST00000568673 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
TCF4-240ENST00000568673 CFAP43Q8NDM7 1665 aa14.24□□□□□ -0.13
TCF4-240ENST00000568673 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
TCF4-240ENST00000568673 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
TCF4-240ENST00000568673 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
TCF4-240ENST00000568673 ITGAEP38570 1179 aa14.21□□□□□ -0.13
TCF4-240ENST00000568673 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
TCF4-240ENST00000568673 TARBP1Q13395 1621 aaKnown RBP14.2□□□□□ -0.14
TCF4-240ENST00000568673 SAMD9Q5K651 1589 aa14.16□□□□□ -0.14
TCF4-240ENST00000568673 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
TCF4-240ENST00000568673 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
TCF4-240ENST00000568673 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
TCF4-240ENST00000568673 FAM50AQ14320 339 aaKnown RBP14.14□□□□□ -0.15
TCF4-240ENST00000568673 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
TCF4-240ENST00000568673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
TCF4-240ENST00000568673 ACIN1Q9UKV3 1341 aaKnown RBP14.13□□□□□ -0.15
TCF4-240ENST00000568673 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
TCF4-240ENST00000568673 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
TCF4-240ENST00000568673 NEUROD1Q13562 356 aa14.1□□□□□ -0.15
TCF4-240ENST00000568673 PBRM1Q86U86 1689 aa14.09□□□□□ -0.15
TCF4-240ENST00000568673 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
TCF4-240ENST00000568673 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.16
TCF4-240ENST00000568673 MIER1Q8N108 512 aa14.08□□□□□ -0.16
TCF4-240ENST00000568673 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
TCF4-240ENST00000568673 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
TCF4-240ENST00000568673 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
TCF4-240ENST00000568673 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
TCF4-240ENST00000568673 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
TCF4-240ENST00000568673 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
TCF4-240ENST00000568673 IQGAP2Q13576 1575 aa14.03□□□□□ -0.16
TCF4-240ENST00000568673 WDR62O43379 1518 aa14.02□□□□□ -0.16
TCF4-240ENST00000568673 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
TCF4-240ENST00000568673 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
TCF4-240ENST00000568673 EHBP1L1Q8N3D4 1523 aa14□□□□□ -0.17
TCF4-240ENST00000568673 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
TCF4-240ENST00000568673 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
TCF4-240ENST00000568673 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
TCF4-240ENST00000568673 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
TCF4-240ENST00000568673 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
TCF4-240ENST00000568673 UGGT2Q9NYU1 1516 aa13.97□□□□□ -0.17
TCF4-240ENST00000568673 HECW1Q76N89 1606 aa13.96□□□□□ -0.17
TCF4-240ENST00000568673 PTPRKQ15262 1439 aa13.96□□□□□ -0.17
TCF4-240ENST00000568673 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
TCF4-240ENST00000568673 SIN3AQ96ST3 1273 aa13.95□□□□□ -0.18
TCF4-240ENST00000568673 MAGI3Q5TCQ9 1506 aa13.95□□□□□ -0.18
TCF4-240ENST00000568673 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
TCF4-240ENST00000568673 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
TCF4-240ENST00000568673 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
TCF4-240ENST00000568673 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
TCF4-240ENST00000568673 PTPN23Q9H3S7 1636 aa13.92□□□□□ -0.18
TCF4-240ENST00000568673 ERCC6Q03468 1493 aa13.91□□□□□ -0.18
TCF4-240ENST00000568673 NAIPQ13075 1403 aa13.91□□□□□ -0.18
TCF4-240ENST00000568673 GRIN2AQ12879 1464 aa13.9□□□□□ -0.18
TCF4-240ENST00000568673 EIF4G3O43432 1585 aaKnown RBP13.9□□□□□ -0.18
TCF4-240ENST00000568673 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
TCF4-240ENST00000568673 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
TCF4-240ENST00000568673 DISP1Q96F81 1524 aa13.89□□□□□ -0.19
TCF4-240ENST00000568673 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
TCF4-240ENST00000568673 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
TCF4-240ENST00000568673 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
TCF4-240ENST00000568673 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
TCF4-240ENST00000568673 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
TCF4-240ENST00000568673 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
TCF4-240ENST00000568673 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
TCF4-240ENST00000568673 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
TCF4-240ENST00000568673 AKNAQ7Z591 1439 aa13.82□□□□□ -0.2
TCF4-240ENST00000568673 NUP153P49790 1475 aaKnown RBP13.82□□□□□ -0.2
TCF4-240ENST00000568673 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
TCF4-240ENST00000568673 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
TCF4-240ENST00000568673 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
TCF4-240ENST00000568673 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
TCF4-240ENST00000568673 RAPGEF6Q8TEU7 1601 aa13.8□□□□□ -0.2
TCF4-240ENST00000568673 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
TCF4-240ENST00000568673 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
TCF4-240ENST00000568673 FBLN2P98095 1184 aa13.77□□□□□ -0.21
TCF4-240ENST00000568673 NUP160Q12769 1436 aa13.77□□□□□ -0.21
TCF4-240ENST00000568673 JPH4Q96JJ6 628 aa13.75□□□□□ -0.21
TCF4-240ENST00000568673 CARMIL2Q6F5E8 1435 aa13.75□□□□□ -0.21
TCF4-240ENST00000568673 ROCK1Q13464 1354 aa13.74□□□□□ -0.21
TCF4-240ENST00000568673 DDX10Q13206 875 aaKnown RBP13.74□□□□□ -0.21
TCF4-240ENST00000568673 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
TCF4-240ENST00000568673 DAPK1P53355 1430 aa13.74□□□□□ -0.21
TCF4-240ENST00000568673 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
TCF4-240ENST00000568673 PLB1Q6P1J6 1458 aa13.73□□□□□ -0.21
TCF4-240ENST00000568673 KDM6BO15054 1643 aa13.72□□□□□ -0.21
TCF4-240ENST00000568673 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms