RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
BBS4-214ENST00000568535 PBRM1Q86U86 1689 aa12.9□□□□□ -0.34
BBS4-214ENST00000568535 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
BBS4-214ENST00000568535 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
BBS4-214ENST00000568535 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
BBS4-214ENST00000568535 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
BBS4-214ENST00000568535 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
BBS4-214ENST00000568535 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
BBS4-214ENST00000568535 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
BBS4-214ENST00000568535 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
BBS4-214ENST00000568535 APLP2Q06481 763 aa12.84□□□□□ -0.35
BBS4-214ENST00000568535 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
BBS4-214ENST00000568535 SYNJ2O15056 1496 aa12.83□□□□□ -0.36
BBS4-214ENST00000568535 FBLN2P98095 1184 aa12.81□□□□□ -0.36
BBS4-214ENST00000568535 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
BBS4-214ENST00000568535 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
BBS4-214ENST00000568535 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
BBS4-214ENST00000568535 CTTNBP2Q8WZ74 1663 aa12.79□□□□□ -0.36
BBS4-214ENST00000568535 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
BBS4-214ENST00000568535 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.37
BBS4-214ENST00000568535 ARAP1Q96P48 1450 aa12.77□□□□□ -0.37
BBS4-214ENST00000568535 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
BBS4-214ENST00000568535 IQGAP2Q13576 1575 aa12.73□□□□□ -0.37
BBS4-214ENST00000568535 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
BBS4-214ENST00000568535 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
BBS4-214ENST00000568535 FMN1Q68DA7 1419 aa12.71□□□□□ -0.37
BBS4-214ENST00000568535 NUP160Q12769 1436 aa12.71□□□□□ -0.38
BBS4-214ENST00000568535 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
BBS4-214ENST00000568535 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
BBS4-214ENST00000568535 PPARGC1BQ86YN6 1023 aaKnown RBP12.69□□□□□ -0.38
BBS4-214ENST00000568535 FHOD3Q2V2M9 1422 aa12.69□□□□□ -0.38
BBS4-214ENST00000568535 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
BBS4-214ENST00000568535 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
BBS4-214ENST00000568535 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
BBS4-214ENST00000568535 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
BBS4-214ENST00000568535 ATP1B4Q9UN42 357 aaPredicted RBP12.66□□□□□ -0.38
BBS4-214ENST00000568535 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
BBS4-214ENST00000568535 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
BBS4-214ENST00000568535 FYCO1Q9BQS8 1478 aa12.63□□□□□ -0.39
BBS4-214ENST00000568535 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
BBS4-214ENST00000568535 DISP1Q96F81 1524 aa12.6□□□□□ -0.39
BBS4-214ENST00000568535 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
BBS4-214ENST00000568535 CHD1O14646 1710 aa12.58□□□□□ -0.4
BBS4-214ENST00000568535 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
BBS4-214ENST00000568535 KANK4Q5T7N3 995 aaPredicted RBP12.57□□□□□ -0.4
BBS4-214ENST00000568535 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
BBS4-214ENST00000568535 PRG4Q92954 1404 aaPredicted RBP12.55□□□□□ -0.4
BBS4-214ENST00000568535 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
BBS4-214ENST00000568535 PPP6R1Q9UPN7 881 aa12.54□□□□□ -0.4
BBS4-214ENST00000568535 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
BBS4-214ENST00000568535 HECW1Q76N89 1606 aa12.52□□□□□ -0.4
BBS4-214ENST00000568535 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
BBS4-214ENST00000568535 ADRA2BP18089 450 aa12.51□□□□□ -0.41
BBS4-214ENST00000568535 PTPRGP23470 1445 aa12.51□□□□□ -0.41
BBS4-214ENST00000568535 MTUS2Q5JR59 1369 aa12.5□□□□□ -0.41
BBS4-214ENST00000568535 CFAP43Q8NDM7 1665 aa12.49□□□□□ -0.41
BBS4-214ENST00000568535 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
BBS4-214ENST00000568535 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
BBS4-214ENST00000568535 EPRSP07814 1512 aaKnown RBP12.48□□□□□ -0.41
BBS4-214ENST00000568535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
BBS4-214ENST00000568535 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
BBS4-214ENST00000568535 RAPGEF6Q8TEU7 1601 aa12.47□□□□□ -0.41
BBS4-214ENST00000568535 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
BBS4-214ENST00000568535 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
BBS4-214ENST00000568535 EHBP1L1Q8N3D4 1523 aa12.43□□□□□ -0.42
BBS4-214ENST00000568535 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
BBS4-214ENST00000568535 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
BBS4-214ENST00000568535 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
BBS4-214ENST00000568535 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
BBS4-214ENST00000568535 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
BBS4-214ENST00000568535 ABCA8O94911 1581 aa12.41□□□□□ -0.42
BBS4-214ENST00000568535 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
BBS4-214ENST00000568535 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
BBS4-214ENST00000568535 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
BBS4-214ENST00000568535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
BBS4-214ENST00000568535 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
BBS4-214ENST00000568535 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
BBS4-214ENST00000568535 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
BBS4-214ENST00000568535 ATP10BO94823 1461 aa12.36□□□□□ -0.43
BBS4-214ENST00000568535 FAM50AQ14320 339 aaKnown RBP12.36□□□□□ -0.43
BBS4-214ENST00000568535 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
BBS4-214ENST00000568535 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
BBS4-214ENST00000568535 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
BBS4-214ENST00000568535 MYOM3Q5VTT5 1437 aa12.35□□□□□ -0.43
BBS4-214ENST00000568535 MAGI3Q5TCQ9 1506 aa12.34□□□□□ -0.43
BBS4-214ENST00000568535 FGD6Q6ZV73 1430 aa12.33□□□□□ -0.44
BBS4-214ENST00000568535 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
BBS4-214ENST00000568535 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
BBS4-214ENST00000568535 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
BBS4-214ENST00000568535 ITGAEP38570 1179 aa12.3□□□□□ -0.44
BBS4-214ENST00000568535 HRCP23327 699 aa12.29□□□□□ -0.44
BBS4-214ENST00000568535 KDM4FA0A1W2PPD8 638 aa12.28□□□□□ -0.44
BBS4-214ENST00000568535 CCER1Q8TC90 406 aaPredicted RBP12.28□□□□□ -0.44
BBS4-214ENST00000568535 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
BBS4-214ENST00000568535 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
BBS4-214ENST00000568535 KIF14Q15058 1648 aa12.26□□□□□ -0.45
BBS4-214ENST00000568535 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
BBS4-214ENST00000568535 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
BBS4-214ENST00000568535 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
BBS4-214ENST00000568535 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms