RNA–Protein interactions for RNA: ENST00000567838.1

THSD4-206, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 2,645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-206ENST00000567838 LAMC3Q9Y6N6 1575 aa17.97■□□□□ 0.47
THSD4-206ENST00000567838 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
THSD4-206ENST00000567838 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
THSD4-206ENST00000567838 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
THSD4-206ENST00000567838 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
THSD4-206ENST00000567838 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
THSD4-206ENST00000567838 ABCA10Q8WWZ4 1543 aa17.87■□□□□ 0.45
THSD4-206ENST00000567838 ERCC6Q03468 1493 aa17.83■□□□□ 0.44
THSD4-206ENST00000567838 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
THSD4-206ENST00000567838 ITGAEP38570 1179 aa17.81■□□□□ 0.44
THSD4-206ENST00000567838 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
THSD4-206ENST00000567838 GAPVD1Q14C86 1478 aa17.79■□□□□ 0.44
THSD4-206ENST00000567838 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
THSD4-206ENST00000567838 FBLN2P98095 1184 aa17.78■□□□□ 0.44
THSD4-206ENST00000567838 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
THSD4-206ENST00000567838 CUL7Q14999 1698 aa17.73■□□□□ 0.43
THSD4-206ENST00000567838 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
THSD4-206ENST00000567838 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.42
THSD4-206ENST00000567838 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
THSD4-206ENST00000567838 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
THSD4-206ENST00000567838 CTTNBP2Q8WZ74 1663 aa17.68■□□□□ 0.42
THSD4-206ENST00000567838 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
THSD4-206ENST00000567838 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
THSD4-206ENST00000567838 TIAM1Q13009 1591 aa17.63■□□□□ 0.41
THSD4-206ENST00000567838 RRBP1Q9P2E9 1410 aaKnown RBP17.63■□□□□ 0.41
THSD4-206ENST00000567838 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
THSD4-206ENST00000567838 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
THSD4-206ENST00000567838 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
THSD4-206ENST00000567838 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
THSD4-206ENST00000567838 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
THSD4-206ENST00000567838 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
THSD4-206ENST00000567838 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
THSD4-206ENST00000567838 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
THSD4-206ENST00000567838 CHMP7Q8WUX9 453 aaPredicted RBP17.54■□□□□ 0.4
THSD4-206ENST00000567838 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
THSD4-206ENST00000567838 WDR62O43379 1518 aa17.53■□□□□ 0.4
THSD4-206ENST00000567838 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
THSD4-206ENST00000567838 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
THSD4-206ENST00000567838 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
THSD4-206ENST00000567838 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
THSD4-206ENST00000567838 THOC2Q8NI27 1593 aaKnown RBP17.49■□□□□ 0.39
THSD4-206ENST00000567838 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
THSD4-206ENST00000567838 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
THSD4-206ENST00000567838 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
THSD4-206ENST00000567838 SAMD9Q5K651 1589 aa17.48■□□□□ 0.39
THSD4-206ENST00000567838 FMN1Q68DA7 1419 aa17.47■□□□□ 0.39
THSD4-206ENST00000567838 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
THSD4-206ENST00000567838 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
THSD4-206ENST00000567838 LRRIQ1Q96JM4 1722 aa17.43■□□□□ 0.38
THSD4-206ENST00000567838 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
THSD4-206ENST00000567838 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
THSD4-206ENST00000567838 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
THSD4-206ENST00000567838 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
THSD4-206ENST00000567838 GRIN2AQ12879 1464 aa17.35■□□□□ 0.37
THSD4-206ENST00000567838 CDK13Q14004 1512 aaKnown RBP17.33■□□□□ 0.36
THSD4-206ENST00000567838 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
THSD4-206ENST00000567838 MAPKBP1O60336 1514 aa17.32■□□□□ 0.36
THSD4-206ENST00000567838 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
THSD4-206ENST00000567838 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
THSD4-206ENST00000567838 SETD5Q9C0A6 1442 aa17.3■□□□□ 0.36
THSD4-206ENST00000567838 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
THSD4-206ENST00000567838 FGD6Q6ZV73 1430 aa17.28■□□□□ 0.36
THSD4-206ENST00000567838 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
THSD4-206ENST00000567838 NCOA2Q15596 1464 aa17.27■□□□□ 0.35
THSD4-206ENST00000567838 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
THSD4-206ENST00000567838 BCANQ96GW7 911 aa17.25■□□□□ 0.35
THSD4-206ENST00000567838 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
THSD4-206ENST00000567838 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
THSD4-206ENST00000567838 HECW1Q76N89 1606 aa17.24■□□□□ 0.35
THSD4-206ENST00000567838 FKBP8Q14318 412 aa17.24■□□□□ 0.35
THSD4-206ENST00000567838 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
THSD4-206ENST00000567838 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
THSD4-206ENST00000567838 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
THSD4-206ENST00000567838 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
THSD4-206ENST00000567838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.23■□□□□ 0.35
THSD4-206ENST00000567838 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
THSD4-206ENST00000567838 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.35
THSD4-206ENST00000567838 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
THSD4-206ENST00000567838 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
THSD4-206ENST00000567838 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
THSD4-206ENST00000567838 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
THSD4-206ENST00000567838 KIAA0556O60303 1618 aa17.21■□□□□ 0.35
THSD4-206ENST00000567838 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
THSD4-206ENST00000567838 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
THSD4-206ENST00000567838 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
THSD4-206ENST00000567838 PTPRKQ15262 1439 aa17.18■□□□□ 0.34
THSD4-206ENST00000567838 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
THSD4-206ENST00000567838 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
THSD4-206ENST00000567838 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
THSD4-206ENST00000567838 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
THSD4-206ENST00000567838 RBM19Q9Y4C8 960 aaKnown RBP17.14■□□□□ 0.33
THSD4-206ENST00000567838 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
THSD4-206ENST00000567838 NEFLP07196 543 aa17.13■□□□□ 0.33
THSD4-206ENST00000567838 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
THSD4-206ENST00000567838 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
THSD4-206ENST00000567838 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
THSD4-206ENST00000567838 NUP160Q12769 1436 aa17.1■□□□□ 0.33
THSD4-206ENST00000567838 CHD1O14646 1710 aa17.1■□□□□ 0.33
THSD4-206ENST00000567838 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.33
THSD4-206ENST00000567838 HFM1A2PYH4 1435 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms