RNA–Protein interactions for RNA: ENST00000567609.1

LINC01254-202, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

TSL 1 (best) BASIC

Gene LINC01254, Length 1,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-202ENST00000567609 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
LINC01254-202ENST00000567609 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
LINC01254-202ENST00000567609 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
LINC01254-202ENST00000567609 FKBP8Q14318 412 aa17.06■□□□□ 0.32
LINC01254-202ENST00000567609 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
LINC01254-202ENST00000567609 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
LINC01254-202ENST00000567609 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
LINC01254-202ENST00000567609 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
LINC01254-202ENST00000567609 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
LINC01254-202ENST00000567609 TIAM1Q13009 1591 aa17.02■□□□□ 0.32
LINC01254-202ENST00000567609 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
LINC01254-202ENST00000567609 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
LINC01254-202ENST00000567609 KCNH8Q96L42 1107 aa16.98■□□□□ 0.31
LINC01254-202ENST00000567609 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
LINC01254-202ENST00000567609 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
LINC01254-202ENST00000567609 BCANQ96GW7 911 aa16.94■□□□□ 0.3
LINC01254-202ENST00000567609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC01254-202ENST00000567609 CUX1P39880 1505 aa16.93■□□□□ 0.3
LINC01254-202ENST00000567609 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
LINC01254-202ENST00000567609 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
LINC01254-202ENST00000567609 ANP32CO43423 234 aa16.92■□□□□ 0.3
LINC01254-202ENST00000567609 RANGAP1P46060 587 aaPredicted RBP16.92■□□□□ 0.3
LINC01254-202ENST00000567609 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
LINC01254-202ENST00000567609 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
LINC01254-202ENST00000567609 THOC2Q8NI27 1593 aaKnown RBP16.9■□□□□ 0.3
LINC01254-202ENST00000567609 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
LINC01254-202ENST00000567609 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
LINC01254-202ENST00000567609 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
LINC01254-202ENST00000567609 PHLDB1Q86UU1 1377 aa16.82■□□□□ 0.28
LINC01254-202ENST00000567609 WDR62O43379 1518 aa16.8■□□□□ 0.28
LINC01254-202ENST00000567609 MSH5O43196 834 aa16.8■□□□□ 0.28
LINC01254-202ENST00000567609 CDK11AQ9UQ88 783 aaPredicted RBP16.8■□□□□ 0.28
LINC01254-202ENST00000567609 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
LINC01254-202ENST00000567609 ITGAEP38570 1179 aa16.78■□□□□ 0.28
LINC01254-202ENST00000567609 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
LINC01254-202ENST00000567609 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
LINC01254-202ENST00000567609 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01254-202ENST00000567609 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
LINC01254-202ENST00000567609 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
LINC01254-202ENST00000567609 SIN3AQ96ST3 1273 aa16.75■□□□□ 0.27
LINC01254-202ENST00000567609 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
LINC01254-202ENST00000567609 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
LINC01254-202ENST00000567609 EFCAB5A4FU69 1503 aa16.73■□□□□ 0.27
LINC01254-202ENST00000567609 IGF1RP08069 1367 aa16.72■□□□□ 0.27
LINC01254-202ENST00000567609 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
LINC01254-202ENST00000567609 HFM1A2PYH4 1435 aa16.69■□□□□ 0.26
LINC01254-202ENST00000567609 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
LINC01254-202ENST00000567609 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
LINC01254-202ENST00000567609 CASKIN1Q8WXD9 1431 aa16.67■□□□□ 0.26
LINC01254-202ENST00000567609 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
LINC01254-202ENST00000567609 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
LINC01254-202ENST00000567609 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
LINC01254-202ENST00000567609 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
LINC01254-202ENST00000567609 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
LINC01254-202ENST00000567609 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
LINC01254-202ENST00000567609 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
LINC01254-202ENST00000567609 PTPN23Q9H3S7 1636 aa16.64■□□□□ 0.25
LINC01254-202ENST00000567609 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC01254-202ENST00000567609 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
LINC01254-202ENST00000567609 CNTLNQ9NXG0 1405 aa16.58■□□□□ 0.24
LINC01254-202ENST00000567609 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
LINC01254-202ENST00000567609 FMN1Q68DA7 1419 aa16.56■□□□□ 0.24
LINC01254-202ENST00000567609 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
LINC01254-202ENST00000567609 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
LINC01254-202ENST00000567609 HECW1Q76N89 1606 aa16.55■□□□□ 0.24
LINC01254-202ENST00000567609 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
LINC01254-202ENST00000567609 HIRIP3Q9BW71 556 aaPredicted RBP16.55■□□□□ 0.24
LINC01254-202ENST00000567609 NAIPQ13075 1403 aa16.54■□□□□ 0.24
LINC01254-202ENST00000567609 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
LINC01254-202ENST00000567609 CUL7Q14999 1698 aa16.52■□□□□ 0.24
LINC01254-202ENST00000567609 DEKP35659 375 aaKnown RBP16.52■□□□□ 0.23
LINC01254-202ENST00000567609 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.23
LINC01254-202ENST00000567609 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
LINC01254-202ENST00000567609 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
LINC01254-202ENST00000567609 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
LINC01254-202ENST00000567609 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
LINC01254-202ENST00000567609 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
LINC01254-202ENST00000567609 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
LINC01254-202ENST00000567609 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
LINC01254-202ENST00000567609 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
LINC01254-202ENST00000567609 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
LINC01254-202ENST00000567609 MYOM3Q5VTT5 1437 aa16.49■□□□□ 0.23
LINC01254-202ENST00000567609 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
LINC01254-202ENST00000567609 PTPRKQ15262 1439 aa16.47■□□□□ 0.23
LINC01254-202ENST00000567609 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
LINC01254-202ENST00000567609 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
LINC01254-202ENST00000567609 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
LINC01254-202ENST00000567609 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC01254-202ENST00000567609 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
LINC01254-202ENST00000567609 IRX6P78412 446 aaPredicted RBP16.45■□□□□ 0.22
LINC01254-202ENST00000567609 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
LINC01254-202ENST00000567609 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
LINC01254-202ENST00000567609 MTUS2Q5JR59 1369 aa16.44■□□□□ 0.22
LINC01254-202ENST00000567609 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
LINC01254-202ENST00000567609 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
LINC01254-202ENST00000567609 PRKRIP1Q9H875 184 aaPredicted RBP16.43■□□□□ 0.22
LINC01254-202ENST00000567609 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
LINC01254-202ENST00000567609 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
LINC01254-202ENST00000567609 UGGT2Q9NYU1 1516 aa16.4■□□□□ 0.22
LINC01254-202ENST00000567609 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms