RNA–Protein interactions for RNA: ENST00000567351.5

TEN1-CDK3-201, Transcript of TEN1-CDK3 readthrough (NMD candidate), humanhuman

TSL 2

Gene TEN1-CDK3, Length 3,897 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEN1-CDK3-201ENST00000567351 FKBP8Q14318 412 aa21.77■■□□□ 1.08
TEN1-CDK3-201ENST00000567351 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
TEN1-CDK3-201ENST00000567351 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 FAM9BQ8IZU0 186 aa21.73■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.071e-6■□□□□ 9.5
TEN1-CDK3-201ENST00000567351 KCNH8Q96L42 1107 aa21.72■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 RAB3GAP2Q9H2M9 1393 aa21.72■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 HNRNPUQ00839 825 aaKnown RBP eCLIP21.71■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 IGF1RP08069 1367 aa21.71■■□□□ 1.07
TEN1-CDK3-201ENST00000567351 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
TEN1-CDK3-201ENST00000567351 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
TEN1-CDK3-201ENST00000567351 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
TEN1-CDK3-201ENST00000567351 SLC4A1APQ9BWU0 796 aaKnown RBP21.68■■□□□ 1.06
TEN1-CDK3-201ENST00000567351 SALL2Q9Y467 1007 aaPredicted RBP21.67■■□□□ 1.06
TEN1-CDK3-201ENST00000567351 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 KIF21BO75037 1637 aa21.61■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 NESP48681 1621 aa21.6■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.05
TEN1-CDK3-201ENST00000567351 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
TEN1-CDK3-201ENST00000567351 RGL3Q3MIN7 710 aa21.56■■□□□ 1.04
TEN1-CDK3-201ENST00000567351 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
TEN1-CDK3-201ENST00000567351 SETD5Q9C0A6 1442 aa21.55■■□□□ 1.04
TEN1-CDK3-201ENST00000567351 CUX1P39880 1505 aa21.5■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 TSPY4P0CV99 314 aa21.5■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 TSPY10P0CW01 314 aa21.5■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 EIF4G2P78344 907 aaKnown RBP eCLIP21.48■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 PHLDB1Q86UU1 1377 aa21.47■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 CLSPNQ9HAW4 1339 aa21.46■■□□□ 1.03
TEN1-CDK3-201ENST00000567351 CFTRP13569 1480 aa21.45■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 PRXQ9BXM0 1461 aa21.41■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.02
TEN1-CDK3-201ENST00000567351 CHGAP10645 457 aaKnown RBP21.39■■□□□ 1.01
TEN1-CDK3-201ENST00000567351 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
TEN1-CDK3-201ENST00000567351 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
TEN1-CDK3-201ENST00000567351 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
TEN1-CDK3-201ENST00000567351 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.015e-8■■■□□ 17.4
TEN1-CDK3-201ENST00000567351 HSPA5P11021 654 aaKnown RBP21.33■■□□□ 1.01
TEN1-CDK3-201ENST00000567351 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
TEN1-CDK3-201ENST00000567351 FMN1Q68DA7 1419 aa21.3■■□□□ 1
TEN1-CDK3-201ENST00000567351 L3MBTL2Q969R5 705 aa21.3■■□□□ 1
TEN1-CDK3-201ENST00000567351 TMC1Q8TDI8 760 aa21.29■■□□□ 1
TEN1-CDK3-201ENST00000567351 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 PKD2Q13563 968 aa21.25■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 GAPVD1Q14C86 1478 aa21.23■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 HNRNPMP52272 730 aaKnown RBP eCLIP21.22■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
TEN1-CDK3-201ENST00000567351 LRRC9Q6ZRR7 1453 aa21.2■□□□□ 0.98
TEN1-CDK3-201ENST00000567351 POLA1P09884 1462 aaPredicted RBP21.19■□□□□ 0.98
TEN1-CDK3-201ENST00000567351 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
TEN1-CDK3-201ENST00000567351 BCL11AQ9H165 835 aa21.15■□□□□ 0.98
TEN1-CDK3-201ENST00000567351 HMGXB3Q12766 1538 aa21.14■□□□□ 0.98
TEN1-CDK3-201ENST00000567351 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 NPM2Q86SE8 214 aaKnown RBP21.1■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
TEN1-CDK3-201ENST00000567351 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 NUP155O75694 1391 aa21.06■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 B4GALNT3Q6L9W6 998 aa21.05■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 NPM1P06748 294 aaKnown RBP eCLIP21.04■□□□□ 0.96
TEN1-CDK3-201ENST00000567351 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
TEN1-CDK3-201ENST00000567351 NCOA2Q15596 1464 aa20.98■□□□□ 0.95
TEN1-CDK3-201ENST00000567351 CASKIN1Q8WXD9 1431 aa20.97■□□□□ 0.95
TEN1-CDK3-201ENST00000567351 MYOM3Q5VTT5 1437 aa20.94■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 TNNT2P45379 298 aaPredicted RBP20.94■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 TIAM1Q13009 1591 aa20.93■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 DAXXQ9UER7 740 aaPredicted RBP20.93■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 ST20-MTHFSA0A0A6YYL1 179 aa20.9■□□□□ 0.94
TEN1-CDK3-201ENST00000567351 CCDC184Q52MB2 194 aa20.89■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 CANXP27824 592 aaKnown RBP20.88■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 NBPF8Q3BBV2 869 aa20.87■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 STAG3Q9UJ98 1225 aa20.87■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 URB2Q14146 1524 aaKnown RBP20.86■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 SAFB2Q14151 953 aaKnown RBP eCLIP20.84■□□□□ 0.93
TEN1-CDK3-201ENST00000567351 GGT6Q6P531 493 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms