RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
CFDP1-207ENST00000566901 IGF1RP08069 1367 aa20.36■□□□□ 0.85
CFDP1-207ENST00000566901 CUL7Q14999 1698 aa20.35■□□□□ 0.85
CFDP1-207ENST00000566901 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
CFDP1-207ENST00000566901 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
CFDP1-207ENST00000566901 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
CFDP1-207ENST00000566901 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
CFDP1-207ENST00000566901 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
CFDP1-207ENST00000566901 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
CFDP1-207ENST00000566901 RAPGEF2Q9Y4G8 1499 aa20.27■□□□□ 0.84
CFDP1-207ENST00000566901 SYNJ2O15056 1496 aa20.26■□□□□ 0.83
CFDP1-207ENST00000566901 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
CFDP1-207ENST00000566901 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
CFDP1-207ENST00000566901 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
CFDP1-207ENST00000566901 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
CFDP1-207ENST00000566901 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
CFDP1-207ENST00000566901 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
CFDP1-207ENST00000566901 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
CFDP1-207ENST00000566901 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
CFDP1-207ENST00000566901 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
CFDP1-207ENST00000566901 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
CFDP1-207ENST00000566901 CEP170Q5SW79 1584 aa20■□□□□ 0.79
CFDP1-207ENST00000566901 CLIP1P30622 1438 aa19.99■□□□□ 0.79
CFDP1-207ENST00000566901 NUP160Q12769 1436 aa19.94■□□□□ 0.78
CFDP1-207ENST00000566901 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
CFDP1-207ENST00000566901 EFCAB5A4FU69 1503 aa19.93■□□□□ 0.78
CFDP1-207ENST00000566901 KIAA0586Q9BVV6 1533 aa19.91■□□□□ 0.78
CFDP1-207ENST00000566901 IQGAP2Q13576 1575 aa19.91■□□□□ 0.78
CFDP1-207ENST00000566901 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
CFDP1-207ENST00000566901 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
CFDP1-207ENST00000566901 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
CFDP1-207ENST00000566901 UGGT2Q9NYU1 1516 aa19.85■□□□□ 0.77
CFDP1-207ENST00000566901 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
CFDP1-207ENST00000566901 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
CFDP1-207ENST00000566901 KIF13AQ9H1H9 1805 aa19.8■□□□□ 0.76
CFDP1-207ENST00000566901 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
CFDP1-207ENST00000566901 KIAA0556O60303 1618 aa19.71■□□□□ 0.75
CFDP1-207ENST00000566901 DISP1Q96F81 1524 aa19.7■□□□□ 0.74
CFDP1-207ENST00000566901 FMN1Q68DA7 1419 aa19.69■□□□□ 0.74
CFDP1-207ENST00000566901 NPM1P06748 294 aaKnown RBP eCLIP19.69■□□□□ 0.74
CFDP1-207ENST00000566901 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
CFDP1-207ENST00000566901 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
CFDP1-207ENST00000566901 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
CFDP1-207ENST00000566901 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
CFDP1-207ENST00000566901 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
CFDP1-207ENST00000566901 ADCY10Q96PN6 1610 aa19.64■□□□□ 0.73
CFDP1-207ENST00000566901 CASKIN1Q8WXD9 1431 aa19.62■□□□□ 0.73
CFDP1-207ENST00000566901 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
CFDP1-207ENST00000566901 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
CFDP1-207ENST00000566901 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
CFDP1-207ENST00000566901 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
CFDP1-207ENST00000566901 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
CFDP1-207ENST00000566901 DIP2BQ9P265 1576 aa19.6■□□□□ 0.73
CFDP1-207ENST00000566901 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
CFDP1-207ENST00000566901 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
CFDP1-207ENST00000566901 KDM6BO15054 1643 aa19.54■□□□□ 0.72
CFDP1-207ENST00000566901 CFAP43Q8NDM7 1665 aa19.53■□□□□ 0.72
CFDP1-207ENST00000566901 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
CFDP1-207ENST00000566901 TIAM1Q13009 1591 aa19.51■□□□□ 0.71
CFDP1-207ENST00000566901 APLP2Q06481 763 aa19.5■□□□□ 0.71
CFDP1-207ENST00000566901 MAPK8IP2Q13387 824 aaPredicted RBP19.49■□□□□ 0.71
CFDP1-207ENST00000566901 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
CFDP1-207ENST00000566901 PTPRGP23470 1445 aa19.48■□□□□ 0.71
CFDP1-207ENST00000566901 RAPGEF6Q8TEU7 1601 aa19.47■□□□□ 0.71
CFDP1-207ENST00000566901 ABCA8O94911 1581 aa19.45■□□□□ 0.7
CFDP1-207ENST00000566901 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
CFDP1-207ENST00000566901 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
CFDP1-207ENST00000566901 EPRSP07814 1512 aaKnown RBP19.41■□□□□ 0.7
CFDP1-207ENST00000566901 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
CFDP1-207ENST00000566901 ABCC2Q92887 1545 aa19.4■□□□□ 0.7
CFDP1-207ENST00000566901 PLB1Q6P1J6 1458 aa19.38■□□□□ 0.69
CFDP1-207ENST00000566901 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
CFDP1-207ENST00000566901 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
CFDP1-207ENST00000566901 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
CFDP1-207ENST00000566901 UHRF1BP1LA0JNW5 1464 aa19.34■□□□□ 0.69
CFDP1-207ENST00000566901 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
CFDP1-207ENST00000566901 PPRC1Q5VV67 1664 aaKnown RBP19.31■□□□□ 0.68
CFDP1-207ENST00000566901 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
CFDP1-207ENST00000566901 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
CFDP1-207ENST00000566901 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
CFDP1-207ENST00000566901 GLI2P10070 1586 aa19.29■□□□□ 0.68
CFDP1-207ENST00000566901 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
CFDP1-207ENST00000566901 ZCCHC11Q5TAX3 1644 aaKnown RBP19.28■□□□□ 0.68
CFDP1-207ENST00000566901 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
CFDP1-207ENST00000566901 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
CFDP1-207ENST00000566901 PPP4R3CPQ6ZMV5 832 aa19.26■□□□□ 0.67
CFDP1-207ENST00000566901 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
CFDP1-207ENST00000566901 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
CFDP1-207ENST00000566901 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
CFDP1-207ENST00000566901 ATP10BO94823 1461 aa19.24■□□□□ 0.67
CFDP1-207ENST00000566901 CDK11AQ9UQ88 783 aaPredicted RBP19.23■□□□□ 0.67
CFDP1-207ENST00000566901 DMRT2Q9Y5R5 561 aa19.23■□□□□ 0.67
CFDP1-207ENST00000566901 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
CFDP1-207ENST00000566901 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
CFDP1-207ENST00000566901 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
CFDP1-207ENST00000566901 TEX14Q8IWB6 1497 aa19.21■□□□□ 0.67
CFDP1-207ENST00000566901 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
CFDP1-207ENST00000566901 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
CFDP1-207ENST00000566901 ADGRL1O94910 1474 aa19.18■□□□□ 0.66
CFDP1-207ENST00000566901 WDR7Q9Y4E6 1490 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms