RNA–Protein interactions for RNA: ENST00000566785.5

KATNB1-208, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-208ENST00000566785 SHROOM2Q13796 1616 aa25.12■■□□□ 1.61
KATNB1-208ENST00000566785 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
KATNB1-208ENST00000566785 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
KATNB1-208ENST00000566785 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
KATNB1-208ENST00000566785 KIF21BO75037 1637 aa25.09■■□□□ 1.61
KATNB1-208ENST00000566785 JPH4Q96JJ6 628 aa25.07■■□□□ 1.6
KATNB1-208ENST00000566785 CTTNBP2Q8WZ74 1663 aa25.06■■□□□ 1.6
KATNB1-208ENST00000566785 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
KATNB1-208ENST00000566785 PRG4Q92954 1404 aaPredicted RBP24.98■■□□□ 1.59
KATNB1-208ENST00000566785 GOLGA3Q08378 1498 aa24.96■■□□□ 1.59
KATNB1-208ENST00000566785 UGGT2Q9NYU1 1516 aa24.92■■□□□ 1.58
KATNB1-208ENST00000566785 CARMIL2Q6F5E8 1435 aa24.92■■□□□ 1.58
KATNB1-208ENST00000566785 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
KATNB1-208ENST00000566785 ERCC6L2Q5T890 1561 aa24.9■■□□□ 1.58
KATNB1-208ENST00000566785 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
KATNB1-208ENST00000566785 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
KATNB1-208ENST00000566785 DISP1Q96F81 1524 aa24.81■■□□□ 1.56
KATNB1-208ENST00000566785 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
KATNB1-208ENST00000566785 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
KATNB1-208ENST00000566785 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
KATNB1-208ENST00000566785 PTPRGP23470 1445 aa24.73■■□□□ 1.55
KATNB1-208ENST00000566785 SAMD9Q5K651 1589 aa24.72■■□□□ 1.55
KATNB1-208ENST00000566785 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
KATNB1-208ENST00000566785 RANGAP1P46060 587 aaPredicted RBP24.61■■□□□ 1.53
KATNB1-208ENST00000566785 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
KATNB1-208ENST00000566785 UACAQ9BZF9 1416 aa24.59■■□□□ 1.53
KATNB1-208ENST00000566785 UHRF1BP1LA0JNW5 1464 aa24.58■■□□□ 1.52
KATNB1-208ENST00000566785 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
KATNB1-208ENST00000566785 ADCY10Q96PN6 1610 aa24.57■■□□□ 1.52
KATNB1-208ENST00000566785 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
KATNB1-208ENST00000566785 ABCC2Q92887 1545 aa24.54■■□□□ 1.52
KATNB1-208ENST00000566785 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
KATNB1-208ENST00000566785 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
KATNB1-208ENST00000566785 ABCA8O94911 1581 aa24.51■■□□□ 1.51
KATNB1-208ENST00000566785 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
KATNB1-208ENST00000566785 CLIP1P30622 1438 aa24.48■■□□□ 1.51
KATNB1-208ENST00000566785 PLB1Q6P1J6 1458 aa24.48■■□□□ 1.51
KATNB1-208ENST00000566785 FMN1Q68DA7 1419 aa24.47■■□□□ 1.51
KATNB1-208ENST00000566785 RAPGEF6Q8TEU7 1601 aa24.45■■□□□ 1.5
KATNB1-208ENST00000566785 KDM5BQ9UGL1 1544 aa24.43■■□□□ 1.5
KATNB1-208ENST00000566785 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
KATNB1-208ENST00000566785 MAPKBP1O60336 1514 aa24.42■■□□□ 1.5
KATNB1-208ENST00000566785 ZCCHC11Q5TAX3 1644 aaKnown RBP24.37■■□□□ 1.49
KATNB1-208ENST00000566785 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
KATNB1-208ENST00000566785 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
KATNB1-208ENST00000566785 ATP10BO94823 1461 aa24.29■■□□□ 1.48
KATNB1-208ENST00000566785 ASXL2Q76L83 1435 aa24.28■■□□□ 1.48
KATNB1-208ENST00000566785 TRHP20396 242 aaPredicted RBP24.28■■□□□ 1.48
KATNB1-208ENST00000566785 CASKIN1Q8WXD9 1431 aa24.27■■□□□ 1.48
KATNB1-208ENST00000566785 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
KATNB1-208ENST00000566785 FYCO1Q9BQS8 1478 aa24.24■■□□□ 1.47
KATNB1-208ENST00000566785 WDR7Q9Y4E6 1490 aa24.23■■□□□ 1.47
KATNB1-208ENST00000566785 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
KATNB1-208ENST00000566785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.22■■□□□ 1.47
KATNB1-208ENST00000566785 HNRNPUL2Q1KMD3 747 aaKnown RBP24.22■■□□□ 1.47
KATNB1-208ENST00000566785 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
KATNB1-208ENST00000566785 DIP2BQ9P265 1576 aa24.21■■□□□ 1.47
KATNB1-208ENST00000566785 EPRSP07814 1512 aaKnown RBP24.2■■□□□ 1.47
KATNB1-208ENST00000566785 ARID3CA6NKF2 412 aa24.2■■□□□ 1.46
KATNB1-208ENST00000566785 KIF13AQ9H1H9 1805 aa24.19■■□□□ 1.46
KATNB1-208ENST00000566785 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
KATNB1-208ENST00000566785 GLI2P10070 1586 aa24.17■■□□□ 1.46
KATNB1-208ENST00000566785 FAM69CQ0P6D2 419 aa24.17■■□□□ 1.46
KATNB1-208ENST00000566785 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
KATNB1-208ENST00000566785 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
KATNB1-208ENST00000566785 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
KATNB1-208ENST00000566785 CDK13Q14004 1512 aaKnown RBP24.14■■□□□ 1.45
KATNB1-208ENST00000566785 LRRIQ1Q96JM4 1722 aa24.12■■□□□ 1.45
KATNB1-208ENST00000566785 KCNH8Q96L42 1107 aa24.07■■□□□ 1.44
KATNB1-208ENST00000566785 CFAP43Q8NDM7 1665 aa24.05■■□□□ 1.44
KATNB1-208ENST00000566785 MAP3K4Q9Y6R4 1608 aa24.04■■□□□ 1.44
KATNB1-208ENST00000566785 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
KATNB1-208ENST00000566785 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
KATNB1-208ENST00000566785 CD109Q6YHK3 1445 aa23.98■■□□□ 1.43
KATNB1-208ENST00000566785 TSPOAP1O95153 1857 aa23.97■■□□□ 1.43
KATNB1-208ENST00000566785 KIF14Q15058 1648 aa23.97■■□□□ 1.43
KATNB1-208ENST00000566785 TEX14Q8IWB6 1497 aa23.97■■□□□ 1.43
KATNB1-208ENST00000566785 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
KATNB1-208ENST00000566785 MAGI3Q5TCQ9 1506 aa23.94■■□□□ 1.42
KATNB1-208ENST00000566785 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
KATNB1-208ENST00000566785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.42
KATNB1-208ENST00000566785 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
KATNB1-208ENST00000566785 MTUS2Q5JR59 1369 aa23.92■■□□□ 1.42
KATNB1-208ENST00000566785 APLP2Q06481 763 aa23.92■■□□□ 1.42
KATNB1-208ENST00000566785 EHBP1L1Q8N3D4 1523 aa23.9■■□□□ 1.42
KATNB1-208ENST00000566785 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
KATNB1-208ENST00000566785 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
KATNB1-208ENST00000566785 PHLDB1Q86UU1 1377 aa23.85■■□□□ 1.41
KATNB1-208ENST00000566785 ARAP3Q8WWN8 1544 aa23.84■■□□□ 1.41
KATNB1-208ENST00000566785 CFAP74Q9C0B2 1584 aa23.83■■□□□ 1.41
KATNB1-208ENST00000566785 LRRC9Q6ZRR7 1453 aa23.82■■□□□ 1.4
KATNB1-208ENST00000566785 PLCH2O75038 1416 aa23.82■■□□□ 1.4
KATNB1-208ENST00000566785 NEO1Q92859 1461 aa23.81■■□□□ 1.4
KATNB1-208ENST00000566785 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
KATNB1-208ENST00000566785 KDM6BO15054 1643 aa23.78■■□□□ 1.4
KATNB1-208ENST00000566785 FANCAO15360 1455 aa23.77■■□□□ 1.4
KATNB1-208ENST00000566785 PREX2Q70Z35 1606 aa23.76■■□□□ 1.39
KATNB1-208ENST00000566785 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
KATNB1-208ENST00000566785 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
KATNB1-208ENST00000566785 CDC42BPAQ5VT25 1732 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms