RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
BBS4-210ENST00000566400 TIAM1Q13009 1591 aa13.76□□□□□ -0.21
BBS4-210ENST00000566400 KANK4Q5T7N3 995 aaPredicted RBP13.75□□□□□ -0.21
BBS4-210ENST00000566400 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
BBS4-210ENST00000566400 WDR62O43379 1518 aa13.74□□□□□ -0.21
BBS4-210ENST00000566400 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
BBS4-210ENST00000566400 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 31
BBS4-210ENST00000566400 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
BBS4-210ENST00000566400 CFAP43Q8NDM7 1665 aa13.7□□□□□ -0.22
BBS4-210ENST00000566400 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
BBS4-210ENST00000566400 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
BBS4-210ENST00000566400 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
BBS4-210ENST00000566400 CTTNBP2Q8WZ74 1663 aa13.68□□□□□ -0.22
BBS4-210ENST00000566400 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
BBS4-210ENST00000566400 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
BBS4-210ENST00000566400 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
BBS4-210ENST00000566400 CASKIN1Q8WXD9 1431 aa13.65□□□□□ -0.22
BBS4-210ENST00000566400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
BBS4-210ENST00000566400 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
BBS4-210ENST00000566400 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
BBS4-210ENST00000566400 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
BBS4-210ENST00000566400 SCAF1Q9H7N4 1312 aaKnown RBP13.63□□□□□ -0.23
BBS4-210ENST00000566400 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
BBS4-210ENST00000566400 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
BBS4-210ENST00000566400 SETD5Q9C0A6 1442 aa13.59□□□□□ -0.23
BBS4-210ENST00000566400 FHOD3Q2V2M9 1422 aa13.57□□□□□ -0.24
BBS4-210ENST00000566400 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
BBS4-210ENST00000566400 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
BBS4-210ENST00000566400 NEUROD1Q13562 356 aa13.55□□□□□ -0.24
BBS4-210ENST00000566400 PHLDB1Q86UU1 1377 aa13.55□□□□□ -0.24
BBS4-210ENST00000566400 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
BBS4-210ENST00000566400 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.24
BBS4-210ENST00000566400 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
BBS4-210ENST00000566400 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
BBS4-210ENST00000566400 ITGAEP38570 1179 aa13.5□□□□□ -0.25
BBS4-210ENST00000566400 P3H3Q8IVL6 736 aa13.5□□□□□ -0.25
BBS4-210ENST00000566400 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
BBS4-210ENST00000566400 ATP1B4Q9UN42 357 aaPredicted RBP13.49□□□□□ -0.25
BBS4-210ENST00000566400 MTUS2Q5JR59 1369 aa13.49□□□□□ -0.25
BBS4-210ENST00000566400 CCDC18Q5T9S5 1454 aa13.49□□□□□ -0.25
BBS4-210ENST00000566400 MIER1Q8N108 512 aa13.48□□□□□ -0.25
BBS4-210ENST00000566400 MAPKBP1O60336 1514 aa13.48□□□□□ -0.25
BBS4-210ENST00000566400 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
BBS4-210ENST00000566400 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
BBS4-210ENST00000566400 GRIN2BQ13224 1484 aa13.46□□□□□ -0.25
BBS4-210ENST00000566400 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
BBS4-210ENST00000566400 PBRM1Q86U86 1689 aa13.45□□□□□ -0.26
BBS4-210ENST00000566400 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
BBS4-210ENST00000566400 GTF3C3Q9Y5Q9 886 aa13.44□□□□□ -0.26
BBS4-210ENST00000566400 HECW1Q76N89 1606 aa13.43□□□□□ -0.26
BBS4-210ENST00000566400 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
BBS4-210ENST00000566400 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
BBS4-210ENST00000566400 IQGAP2Q13576 1575 aa13.42□□□□□ -0.26
BBS4-210ENST00000566400 RIMBP3CA6NJZ7 1639 aa13.41□□□□□ -0.26
BBS4-210ENST00000566400 RIMBP3BA6NNM3 1639 aa13.41□□□□□ -0.26
BBS4-210ENST00000566400 RIMBP3Q9UFD9 1639 aa13.41□□□□□ -0.26
BBS4-210ENST00000566400 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
BBS4-210ENST00000566400 HFM1A2PYH4 1435 aa13.4□□□□□ -0.26
BBS4-210ENST00000566400 NCOA2Q15596 1464 aa13.4□□□□□ -0.26
BBS4-210ENST00000566400 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
BBS4-210ENST00000566400 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
BBS4-210ENST00000566400 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
BBS4-210ENST00000566400 YTHDC1Q96MU7 727 aaKnown RBP13.36□□□□□ -0.27
BBS4-210ENST00000566400 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
BBS4-210ENST00000566400 AKNAQ7Z591 1439 aa13.35□□□□□ -0.27
BBS4-210ENST00000566400 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
BBS4-210ENST00000566400 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
BBS4-210ENST00000566400 PTPN23Q9H3S7 1636 aa13.34□□□□□ -0.27
BBS4-210ENST00000566400 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
BBS4-210ENST00000566400 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
BBS4-210ENST00000566400 NAIPQ13075 1403 aa13.3□□□□□ -0.28
BBS4-210ENST00000566400 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
BBS4-210ENST00000566400 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
BBS4-210ENST00000566400 PPP1R15AO75807 674 aaPredicted RBP13.29□□□□□ -0.28
BBS4-210ENST00000566400 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
BBS4-210ENST00000566400 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
BBS4-210ENST00000566400 KIAA0556O60303 1618 aa13.26□□□□□ -0.29
BBS4-210ENST00000566400 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
BBS4-210ENST00000566400 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
BBS4-210ENST00000566400 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
BBS4-210ENST00000566400 ZNF608Q9ULD9 1512 aaPredicted RBP13.26□□□□□ -0.29
BBS4-210ENST00000566400 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
BBS4-210ENST00000566400 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
BBS4-210ENST00000566400 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
BBS4-210ENST00000566400 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
BBS4-210ENST00000566400 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.29
BBS4-210ENST00000566400 DISP1Q96F81 1524 aa13.21□□□□□ -0.3
BBS4-210ENST00000566400 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
BBS4-210ENST00000566400 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
BBS4-210ENST00000566400 CCER2I3L3R5 266 aa13.18□□□□□ -0.3
BBS4-210ENST00000566400 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
BBS4-210ENST00000566400 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
BBS4-210ENST00000566400 CHD1O14646 1710 aa13.17□□□□□ -0.3
BBS4-210ENST00000566400 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
BBS4-210ENST00000566400 ITSN2Q9NZM3 1697 aa13.16□□□□□ -0.3
BBS4-210ENST00000566400 DAPK1P53355 1430 aa13.15□□□□□ -0.3
BBS4-210ENST00000566400 ANP32CO43423 234 aa13.15□□□□□ -0.3
BBS4-210ENST00000566400 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
BBS4-210ENST00000566400 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
BBS4-210ENST00000566400 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms