RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ARHGAP35Q9NRY4 1499 aa31.46■■■□□ 2.63
SPSB3-208ENST00000566339 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
SPSB3-208ENST00000566339 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
SPSB3-208ENST00000566339 IGF1RP08069 1367 aa31.38■■■□□ 2.61
SPSB3-208ENST00000566339 KANK4Q5T7N3 995 aaPredicted RBP31.38■■■□□ 2.61
SPSB3-208ENST00000566339 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
SPSB3-208ENST00000566339 DNMBPQ6XZF7 1577 aa31.28■■■□□ 2.6
SPSB3-208ENST00000566339 RANGAP1P46060 587 aaPredicted RBP31.28■■■□□ 2.6
SPSB3-208ENST00000566339 TIAM1Q13009 1591 aa31.26■■■□□ 2.59
SPSB3-208ENST00000566339 CARMIL1Q5VZK9 1371 aa31.21■■■□□ 2.59
SPSB3-208ENST00000566339 IFT140Q96RY7 1462 aa31.2■■■□□ 2.59
SPSB3-208ENST00000566339 ABCA10Q8WWZ4 1543 aa31.17■■■□□ 2.58
SPSB3-208ENST00000566339 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
SPSB3-208ENST00000566339 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
SPSB3-208ENST00000566339 CFAP43Q8NDM7 1665 aa31.13■■■□□ 2.57
SPSB3-208ENST00000566339 TIMELESSQ9UNS1 1208 aa31.12■■■□□ 2.57
SPSB3-208ENST00000566339 MAPKBP1O60336 1514 aa31.11■■■□□ 2.57
SPSB3-208ENST00000566339 CUL7Q14999 1698 aa31.1■■■□□ 2.57
SPSB3-208ENST00000566339 LRRC9Q6ZRR7 1453 aa31.1■■■□□ 2.57
SPSB3-208ENST00000566339 SETD5Q9C0A6 1442 aa31.09■■■□□ 2.57
SPSB3-208ENST00000566339 RAB3GAP2Q9H2M9 1393 aa31.09■■■□□ 2.57
SPSB3-208ENST00000566339 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
SPSB3-208ENST00000566339 WDR97A6NE52 1622 aa31.08■■■□□ 2.57
SPSB3-208ENST00000566339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.05■■■□□ 2.561e-6■■■■□ 25.8
SPSB3-208ENST00000566339 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
SPSB3-208ENST00000566339 EFCAB5A4FU69 1503 aa31.02■■■□□ 2.56
SPSB3-208ENST00000566339 SUPT16HQ9Y5B9 1047 aaKnown RBP31.02■■■□□ 2.56
SPSB3-208ENST00000566339 CTTNBP2Q8WZ74 1663 aa31.01■■■□□ 2.55
SPSB3-208ENST00000566339 RAD54L2Q9Y4B4 1467 aa31■■■□□ 2.55
SPSB3-208ENST00000566339 PCF11O94913 1555 aaKnown RBP30.99■■■□□ 2.55
SPSB3-208ENST00000566339 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
SPSB3-208ENST00000566339 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.552e-8■■■■■ 44.6
SPSB3-208ENST00000566339 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
SPSB3-208ENST00000566339 FYCO1Q9BQS8 1478 aa30.89■■■□□ 2.54
SPSB3-208ENST00000566339 ABCA5Q8WWZ7 1642 aa30.88■■■□□ 2.53
SPSB3-208ENST00000566339 TDRD9Q8NDG6 1382 aaKnown RBP30.88■■■□□ 2.53
SPSB3-208ENST00000566339 PHLDB1Q86UU1 1377 aa30.87■■■□□ 2.53
SPSB3-208ENST00000566339 CASKIN1Q8WXD9 1431 aa30.8■■■□□ 2.52
SPSB3-208ENST00000566339 SAMD9Q5K651 1589 aa30.75■■■□□ 2.51
SPSB3-208ENST00000566339 ITGAEP38570 1179 aa30.74■■■□□ 2.51
SPSB3-208ENST00000566339 FHOD3Q2V2M9 1422 aa30.73■■■□□ 2.51
SPSB3-208ENST00000566339 FBLN2P98095 1184 aa30.72■■■□□ 2.51
SPSB3-208ENST00000566339 CCER2I3L3R5 266 aa30.71■■■□□ 2.51
SPSB3-208ENST00000566339 SNAPC4Q5SXM2 1469 aa30.69■■■□□ 2.5
SPSB3-208ENST00000566339 FMN1Q68DA7 1419 aa30.66■■■□□ 2.5
SPSB3-208ENST00000566339 CHD1O14646 1710 aa30.66■■■□□ 2.5
SPSB3-208ENST00000566339 PPP1R15AO75807 674 aaPredicted RBP30.66■■■□□ 2.5
SPSB3-208ENST00000566339 FAM50AQ14320 339 aaKnown RBP30.61■■■□□ 2.49
SPSB3-208ENST00000566339 GRIN2BQ13224 1484 aa30.6■■■□□ 2.49
SPSB3-208ENST00000566339 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
SPSB3-208ENST00000566339 TSHZ2Q9NRE2 1034 aa30.6■■■□□ 2.49
SPSB3-208ENST00000566339 LRRIQ1Q96JM4 1722 aa30.58■■■□□ 2.49
SPSB3-208ENST00000566339 FGD6Q6ZV73 1430 aa30.57■■■□□ 2.48
SPSB3-208ENST00000566339 HFM1A2PYH4 1435 aa30.54■■■□□ 2.48
SPSB3-208ENST00000566339 PBRM1Q86U86 1689 aa30.54■■■□□ 2.48
SPSB3-208ENST00000566339 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
SPSB3-208ENST00000566339 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
SPSB3-208ENST00000566339 UACAQ9BZF9 1416 aa30.53■■■□□ 2.48
SPSB3-208ENST00000566339 SIN3AQ96ST3 1273 aa30.52■■■□□ 2.48
SPSB3-208ENST00000566339 DDX10Q13206 875 aaKnown RBP30.5■■■□□ 2.47
SPSB3-208ENST00000566339 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
SPSB3-208ENST00000566339 CCDC18Q5T9S5 1454 aa30.47■■■□□ 2.47
SPSB3-208ENST00000566339 ANP32CO43423 234 aa30.46■■■□□ 2.47
SPSB3-208ENST00000566339 PTPN23Q9H3S7 1636 aa30.45■■■□□ 2.46
SPSB3-208ENST00000566339 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
SPSB3-208ENST00000566339 KCNH8Q96L42 1107 aa30.43■■■□□ 2.46
SPSB3-208ENST00000566339 TONSLQ96HA7 1378 aa30.43■■■□□ 2.46
SPSB3-208ENST00000566339 RIMBP3CA6NJZ7 1639 aa30.42■■■□□ 2.46
SPSB3-208ENST00000566339 RIMBP3BA6NNM3 1639 aa30.42■■■□□ 2.46
SPSB3-208ENST00000566339 RIMBP3Q9UFD9 1639 aa30.42■■■□□ 2.46
SPSB3-208ENST00000566339 EHBP1L1Q8N3D4 1523 aa30.41■■■□□ 2.46
SPSB3-208ENST00000566339 NEFLP07196 543 aa30.39■■■□□ 2.46
SPSB3-208ENST00000566339 SUPT6HQ7KZ85 1726 aaKnown RBP30.38■■■□□ 2.45
SPSB3-208ENST00000566339 ARHGEF11O15085 1522 aa30.38■■■□□ 2.45
SPSB3-208ENST00000566339 MYOM3Q5VTT5 1437 aa30.37■■■□□ 2.45
SPSB3-208ENST00000566339 MTUS2Q5JR59 1369 aa30.37■■■□□ 2.45
SPSB3-208ENST00000566339 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
SPSB3-208ENST00000566339 ANP32EQ9BTT0 268 aa30.33■■■□□ 2.45
SPSB3-208ENST00000566339 AKNAQ7Z591 1439 aa30.33■■■□□ 2.45
SPSB3-208ENST00000566339 NAIPQ13075 1403 aa30.32■■■□□ 2.44
SPSB3-208ENST00000566339 NCOA2Q15596 1464 aa30.31■■■□□ 2.44
SPSB3-208ENST00000566339 FKBP8Q14318 412 aa30.31■■■□□ 2.44
SPSB3-208ENST00000566339 UGGT2Q9NYU1 1516 aa30.3■■■□□ 2.44
SPSB3-208ENST00000566339 IQGAP2Q13576 1575 aa30.28■■■□□ 2.44
SPSB3-208ENST00000566339 ATP1B4Q9UN42 357 aaPredicted RBP30.28■■■□□ 2.44
SPSB3-208ENST00000566339 HECW1Q76N89 1606 aa30.28■■■□□ 2.44
SPSB3-208ENST00000566339 TCOF1Q13428 1488 aaKnown RBP30.27■■■□□ 2.44
SPSB3-208ENST00000566339 CLASP1Q7Z460 1538 aa30.26■■■□□ 2.43
SPSB3-208ENST00000566339 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
SPSB3-208ENST00000566339 KDM5BQ9UGL1 1544 aa30.23■■■□□ 2.43
SPSB3-208ENST00000566339 GCC2Q8IWJ2 1684 aa30.23■■■□□ 2.43
SPSB3-208ENST00000566339 MAGI3Q5TCQ9 1506 aa30.23■■■□□ 2.43
SPSB3-208ENST00000566339 GRIN2AQ12879 1464 aa30.22■■■□□ 2.43
SPSB3-208ENST00000566339 CYB5RLQ6IPT4 315 aa30.22■■■□□ 2.43
SPSB3-208ENST00000566339 ERICH6BQ5W0A0 696 aa30.13■■■□□ 2.41
SPSB3-208ENST00000566339 MIA2Q96PC5 1412 aa30.11■■■□□ 2.41
SPSB3-208ENST00000566339 CEP170Q5SW79 1584 aa30.09■■■□□ 2.41
SPSB3-208ENST00000566339 EPRSP07814 1512 aaKnown RBP30.09■■■□□ 2.41
SPSB3-208ENST00000566339 NUP160Q12769 1436 aa30.07■■■□□ 2.4
SPSB3-208ENST00000566339 BCANQ96GW7 911 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms