RNA–Protein interactions for RNA: ENST00000566035.5

SNAP23-211, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-211ENST00000566035 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
SNAP23-211ENST00000566035 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
SNAP23-211ENST00000566035 MAPKBP1O60336 1514 aa13.55□□□□□ -0.24
SNAP23-211ENST00000566035 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
SNAP23-211ENST00000566035 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
SNAP23-211ENST00000566035 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
SNAP23-211ENST00000566035 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNAP23-211ENST00000566035 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
SNAP23-211ENST00000566035 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
SNAP23-211ENST00000566035 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
SNAP23-211ENST00000566035 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
SNAP23-211ENST00000566035 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
SNAP23-211ENST00000566035 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
SNAP23-211ENST00000566035 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
SNAP23-211ENST00000566035 PTPRMP28827 1452 aa13.39□□□□□ -0.27
SNAP23-211ENST00000566035 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
SNAP23-211ENST00000566035 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
SNAP23-211ENST00000566035 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
SNAP23-211ENST00000566035 HSPA2P54652 639 aa13.35□□□□□ -0.27
SNAP23-211ENST00000566035 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
SNAP23-211ENST00000566035 WDR97A6NE52 1622 aa13.33□□□□□ -0.28
SNAP23-211ENST00000566035 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
SNAP23-211ENST00000566035 PPRC1Q5VV67 1664 aaKnown RBP13.33□□□□□ -0.28
SNAP23-211ENST00000566035 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
SNAP23-211ENST00000566035 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
SNAP23-211ENST00000566035 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
SNAP23-211ENST00000566035 KIF21BO75037 1637 aa13.24□□□□□ -0.29
SNAP23-211ENST00000566035 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
SNAP23-211ENST00000566035 SOGA1O94964 1423 aa13.23□□□□□ -0.29
SNAP23-211ENST00000566035 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
SNAP23-211ENST00000566035 ADAMTSL3P82987 1691 aa13.2□□□□□ -0.3
SNAP23-211ENST00000566035 IQSEC2Q5JU85 1478 aa13.18□□□□□ -0.3
SNAP23-211ENST00000566035 PRG4Q92954 1404 aaPredicted RBP13.18□□□□□ -0.3
SNAP23-211ENST00000566035 GLI2P10070 1586 aa13.18□□□□□ -0.3
SNAP23-211ENST00000566035 IFFO2Q5TF58 517 aa13.16□□□□□ -0.3
SNAP23-211ENST00000566035 WIZO95785 1651 aa13.15□□□□□ -0.3
SNAP23-211ENST00000566035 NUP160Q12769 1436 aa13.15□□□□□ -0.3
SNAP23-211ENST00000566035 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
SNAP23-211ENST00000566035 PBRM1Q86U86 1689 aa13.13□□□□□ -0.31
SNAP23-211ENST00000566035 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
SNAP23-211ENST00000566035 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
SNAP23-211ENST00000566035 PLB1Q6P1J6 1458 aa13.06□□□□□ -0.32
SNAP23-211ENST00000566035 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
SNAP23-211ENST00000566035 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
SNAP23-211ENST00000566035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■□□□□ 11.2
SNAP23-211ENST00000566035 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
SNAP23-211ENST00000566035 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.32
SNAP23-211ENST00000566035 PTPRTO14522 1441 aa13.02□□□□□ -0.33
SNAP23-211ENST00000566035 KIAA0586Q9BVV6 1533 aa13.02□□□□□ -0.33
SNAP23-211ENST00000566035 HSPA1LP34931 641 aa13.01□□□□□ -0.33
SNAP23-211ENST00000566035 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
SNAP23-211ENST00000566035 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
SNAP23-211ENST00000566035 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
SNAP23-211ENST00000566035 JPH4Q96JJ6 628 aa13□□□□□ -0.33
SNAP23-211ENST00000566035 CFAP43Q8NDM7 1665 aa12.98□□□□□ -0.33
SNAP23-211ENST00000566035 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
SNAP23-211ENST00000566035 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
SNAP23-211ENST00000566035 EPRSP07814 1512 aaKnown RBP12.94□□□□□ -0.34
SNAP23-211ENST00000566035 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
SNAP23-211ENST00000566035 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
SNAP23-211ENST00000566035 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
SNAP23-211ENST00000566035 ABCC2Q92887 1545 aa12.92□□□□□ -0.34
SNAP23-211ENST00000566035 TOP2AP11388 1531 aaKnown RBP12.91□□□□□ -0.34
SNAP23-211ENST00000566035 RGS17Q9UGC6 210 aaPredicted RBP12.88□□□□□ -0.35
SNAP23-211ENST00000566035 SRCAPQ6ZRS2 3230 aa12.88□□□□□ -0.35
SNAP23-211ENST00000566035 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
SNAP23-211ENST00000566035 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
SNAP23-211ENST00000566035 PIP4K2BP78356 416 aa12.84□□□□□ -0.35
SNAP23-211ENST00000566035 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
SNAP23-211ENST00000566035 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
SNAP23-211ENST00000566035 CUL7Q14999 1698 aa12.83□□□□□ -0.36
SNAP23-211ENST00000566035 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
SNAP23-211ENST00000566035 POTEHQ6S545 545 aa12.82□□□□□ -0.36
SNAP23-211ENST00000566035 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
SNAP23-211ENST00000566035 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
SNAP23-211ENST00000566035 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
SNAP23-211ENST00000566035 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNAP23-211ENST00000566035 DSG3P32926 999 aa12.77□□□□□ -0.37
SNAP23-211ENST00000566035 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
SNAP23-211ENST00000566035 PTPRGP23470 1445 aa12.76□□□□□ -0.37
SNAP23-211ENST00000566035 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
SNAP23-211ENST00000566035 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
SNAP23-211ENST00000566035 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
SNAP23-211ENST00000566035 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
SNAP23-211ENST00000566035 ARAP3Q8WWN8 1544 aa12.73□□□□□ -0.37
SNAP23-211ENST00000566035 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
SNAP23-211ENST00000566035 TOM1O60784 492 aa12.73□□□□□ -0.37
SNAP23-211ENST00000566035 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.37
SNAP23-211ENST00000566035 POGZQ7Z3K3 1410 aa12.71□□□□□ -0.38
SNAP23-211ENST00000566035 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
SNAP23-211ENST00000566035 CUX1P39880 1505 aa12.7□□□□□ -0.38
SNAP23-211ENST00000566035 CAPN15O75808 1086 aa12.68□□□□□ -0.38
SNAP23-211ENST00000566035 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
SNAP23-211ENST00000566035 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.38
SNAP23-211ENST00000566035 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
SNAP23-211ENST00000566035 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
SNAP23-211ENST00000566035 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
SNAP23-211ENST00000566035 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
SNAP23-211ENST00000566035 FANCAO15360 1455 aa12.63□□□□□ -0.39
SNAP23-211ENST00000566035 RAPGEF3O95398 923 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms