RNA–Protein interactions for RNA: ENST00000565678.5

RNPS1-216, Transcript of RNA binding protein with serine rich domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNPS1, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-216ENST00000565678 LAMC3Q9Y6N6 1575 aa22.05■■□□□ 1.12
RNPS1-216ENST00000565678 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
RNPS1-216ENST00000565678 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
RNPS1-216ENST00000565678 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
RNPS1-216ENST00000565678 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
RNPS1-216ENST00000565678 CUL7Q14999 1698 aa22.03■■□□□ 1.12
RNPS1-216ENST00000565678 FHOD3Q2V2M9 1422 aa22.01■■□□□ 1.11
RNPS1-216ENST00000565678 CFAP43Q8NDM7 1665 aa22■■□□□ 1.11
RNPS1-216ENST00000565678 WDR97A6NE52 1622 aa22■■□□□ 1.11
RNPS1-216ENST00000565678 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
RNPS1-216ENST00000565678 MIER1Q8N108 512 aa21.99■■□□□ 1.11
RNPS1-216ENST00000565678 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
RNPS1-216ENST00000565678 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
RNPS1-216ENST00000565678 DNAJC5BQ9UF47 199 aa21.96■■□□□ 1.11
RNPS1-216ENST00000565678 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
RNPS1-216ENST00000565678 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
RNPS1-216ENST00000565678 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
RNPS1-216ENST00000565678 FYCO1Q9BQS8 1478 aa21.92■■□□□ 1.1
RNPS1-216ENST00000565678 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
RNPS1-216ENST00000565678 CASKIN1Q8WXD9 1431 aa21.9■■□□□ 1.1
RNPS1-216ENST00000565678 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
RNPS1-216ENST00000565678 YTHDC1Q96MU7 727 aaKnown RBP21.89■■□□□ 1.09
RNPS1-216ENST00000565678 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.093e-7■■■■□ 22.2
RNPS1-216ENST00000565678 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
RNPS1-216ENST00000565678 GTF3C3Q9Y5Q9 886 aa21.88■■□□□ 1.09
RNPS1-216ENST00000565678 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
RNPS1-216ENST00000565678 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
RNPS1-216ENST00000565678 SETD5Q9C0A6 1442 aa21.86■■□□□ 1.09
RNPS1-216ENST00000565678 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
RNPS1-216ENST00000565678 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
RNPS1-216ENST00000565678 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
RNPS1-216ENST00000565678 SAMD9Q5K651 1589 aa21.79■■□□□ 1.08
RNPS1-216ENST00000565678 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
RNPS1-216ENST00000565678 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
RNPS1-216ENST00000565678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
RNPS1-216ENST00000565678 FGD6Q6ZV73 1430 aa21.7■■□□□ 1.06
RNPS1-216ENST00000565678 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
RNPS1-216ENST00000565678 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
RNPS1-216ENST00000565678 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
RNPS1-216ENST00000565678 PBRM1Q86U86 1689 aa21.65■■□□□ 1.06
RNPS1-216ENST00000565678 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
RNPS1-216ENST00000565678 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
RNPS1-216ENST00000565678 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
RNPS1-216ENST00000565678 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
RNPS1-216ENST00000565678 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.04
RNPS1-216ENST00000565678 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
RNPS1-216ENST00000565678 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
RNPS1-216ENST00000565678 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
RNPS1-216ENST00000565678 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
RNPS1-216ENST00000565678 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
RNPS1-216ENST00000565678 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
RNPS1-216ENST00000565678 CCDC18Q5T9S5 1454 aa21.53■■□□□ 1.04
RNPS1-216ENST00000565678 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
RNPS1-216ENST00000565678 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.03
RNPS1-216ENST00000565678 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.03
RNPS1-216ENST00000565678 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
RNPS1-216ENST00000565678 TIMELESSQ9UNS1 1208 aa21.49■■□□□ 1.03
RNPS1-216ENST00000565678 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
RNPS1-216ENST00000565678 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
RNPS1-216ENST00000565678 NAIPQ13075 1403 aa21.47■■□□□ 1.03
RNPS1-216ENST00000565678 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
RNPS1-216ENST00000565678 PPP1R15AO75807 674 aaPredicted RBP21.45■■□□□ 1.02
RNPS1-216ENST00000565678 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
RNPS1-216ENST00000565678 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
RNPS1-216ENST00000565678 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
RNPS1-216ENST00000565678 WDR62O43379 1518 aa21.42■■□□□ 1.02
RNPS1-216ENST00000565678 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
RNPS1-216ENST00000565678 ARID3CA6NKF2 412 aa21.39■■□□□ 1.02
RNPS1-216ENST00000565678 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
RNPS1-216ENST00000565678 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
RNPS1-216ENST00000565678 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
RNPS1-216ENST00000565678 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
RNPS1-216ENST00000565678 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
RNPS1-216ENST00000565678 KCNH8Q96L42 1107 aa21.35■■□□□ 1.01
RNPS1-216ENST00000565678 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
RNPS1-216ENST00000565678 DISP1Q96F81 1524 aa21.33■■□□□ 1
RNPS1-216ENST00000565678 KIAA0556O60303 1618 aa21.32■■□□□ 1
RNPS1-216ENST00000565678 GCC2Q8IWJ2 1684 aa21.32■■□□□ 1
RNPS1-216ENST00000565678 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
RNPS1-216ENST00000565678 MIA2Q96PC5 1412 aa21.3■■□□□ 1
RNPS1-216ENST00000565678 GRIN2AQ12879 1464 aa21.3■■□□□ 1
RNPS1-216ENST00000565678 KDM6BO15054 1643 aa21.29■■□□□ 1
RNPS1-216ENST00000565678 AKNAQ7Z591 1439 aa21.27■□□□□ 0.99
RNPS1-216ENST00000565678 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
RNPS1-216ENST00000565678 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
RNPS1-216ENST00000565678 NUP153P49790 1475 aaKnown RBP21.25■□□□□ 0.99
RNPS1-216ENST00000565678 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
RNPS1-216ENST00000565678 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
RNPS1-216ENST00000565678 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
RNPS1-216ENST00000565678 DAPK1P53355 1430 aa21.18■□□□□ 0.98
RNPS1-216ENST00000565678 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
RNPS1-216ENST00000565678 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
RNPS1-216ENST00000565678 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
RNPS1-216ENST00000565678 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
RNPS1-216ENST00000565678 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
RNPS1-216ENST00000565678 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
RNPS1-216ENST00000565678 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
RNPS1-216ENST00000565678 ABCC5O15440 1437 aa21.15■□□□□ 0.98
RNPS1-216ENST00000565678 SYNJ2O15056 1496 aa21.14■□□□□ 0.97
RNPS1-216ENST00000565678 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms