RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
KARS-204ENST00000564578 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
KARS-204ENST00000564578 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
KARS-204ENST00000564578 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
KARS-204ENST00000564578 IQGAP2Q13576 1575 aa20.45■□□□□ 0.86
KARS-204ENST00000564578 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
KARS-204ENST00000564578 UBTFP17480 764 aaKnown RBP20.42■□□□□ 0.86
KARS-204ENST00000564578 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
KARS-204ENST00000564578 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
KARS-204ENST00000564578 ERCC6L2Q5T890 1561 aa20.4■□□□□ 0.86
KARS-204ENST00000564578 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
KARS-204ENST00000564578 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
KARS-204ENST00000564578 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
KARS-204ENST00000564578 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
KARS-204ENST00000564578 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
KARS-204ENST00000564578 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
KARS-204ENST00000564578 TNIKQ9UKE5 1360 aa20.3■□□□□ 0.84
KARS-204ENST00000564578 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
KARS-204ENST00000564578 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
KARS-204ENST00000564578 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
KARS-204ENST00000564578 CYB5RLQ6IPT4 315 aa20.25■□□□□ 0.83
KARS-204ENST00000564578 KIAA0556O60303 1618 aa20.25■□□□□ 0.83
KARS-204ENST00000564578 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
KARS-204ENST00000564578 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
KARS-204ENST00000564578 PTPRGP23470 1445 aa20.2■□□□□ 0.82
KARS-204ENST00000564578 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
KARS-204ENST00000564578 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
KARS-204ENST00000564578 EFCAB5A4FU69 1503 aa20.17■□□□□ 0.82
KARS-204ENST00000564578 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
KARS-204ENST00000564578 CLIP1P30622 1438 aa20.13■□□□□ 0.81
KARS-204ENST00000564578 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
KARS-204ENST00000564578 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.8
KARS-204ENST00000564578 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
KARS-204ENST00000564578 ADCY10Q96PN6 1610 aa20.04■□□□□ 0.8
KARS-204ENST00000564578 ABCA8O94911 1581 aa20.03■□□□□ 0.8
KARS-204ENST00000564578 UHRF1BP1LA0JNW5 1464 aa20.02■□□□□ 0.8
KARS-204ENST00000564578 ABCC2Q92887 1545 aa20.01■□□□□ 0.79
KARS-204ENST00000564578 FMN1Q68DA7 1419 aa19.99■□□□□ 0.79
KARS-204ENST00000564578 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
KARS-204ENST00000564578 KDM5BQ9UGL1 1544 aa19.94■□□□□ 0.78
KARS-204ENST00000564578 NUP153P49790 1475 aaKnown RBP19.94■□□□□ 0.78
KARS-204ENST00000564578 ARID3CA6NKF2 412 aa19.92■□□□□ 0.78
KARS-204ENST00000564578 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
KARS-204ENST00000564578 ATP10BO94823 1461 aa19.9■□□□□ 0.78
KARS-204ENST00000564578 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.78
KARS-204ENST00000564578 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
KARS-204ENST00000564578 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
KARS-204ENST00000564578 ZCCHC11Q5TAX3 1644 aaKnown RBP19.87■□□□□ 0.77
KARS-204ENST00000564578 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
KARS-204ENST00000564578 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
KARS-204ENST00000564578 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
KARS-204ENST00000564578 HECW1Q76N89 1606 aa19.83■□□□□ 0.77
KARS-204ENST00000564578 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
KARS-204ENST00000564578 ASXL2Q76L83 1435 aa19.82■□□□□ 0.76
KARS-204ENST00000564578 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
KARS-204ENST00000564578 LRRIQ1Q96JM4 1722 aa19.8■□□□□ 0.76
KARS-204ENST00000564578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
KARS-204ENST00000564578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
KARS-204ENST00000564578 WDR7Q9Y4E6 1490 aa19.75■□□□□ 0.75
KARS-204ENST00000564578 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
KARS-204ENST00000564578 ABCC10Q5T3U5 1492 aa19.74■□□□□ 0.75
KARS-204ENST00000564578 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
KARS-204ENST00000564578 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
KARS-204ENST00000564578 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
KARS-204ENST00000564578 FAM69CQ0P6D2 419 aa19.69■□□□□ 0.74
KARS-204ENST00000564578 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
KARS-204ENST00000564578 DIP2BQ9P265 1576 aa19.69■□□□□ 0.74
KARS-204ENST00000564578 MAGI3Q5TCQ9 1506 aa19.69■□□□□ 0.74
KARS-204ENST00000564578 KIF13AQ9H1H9 1805 aa19.65■□□□□ 0.74
KARS-204ENST00000564578 TROQ12816 1431 aaPredicted RBP19.65■□□□□ 0.74
KARS-204ENST00000564578 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
KARS-204ENST00000564578 MAP3K1Q13233 1512 aa19.63■□□□□ 0.73
KARS-204ENST00000564578 GLI2P10070 1586 aa19.63■□□□□ 0.73
KARS-204ENST00000564578 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
KARS-204ENST00000564578 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
KARS-204ENST00000564578 MTUS2Q5JR59 1369 aa19.59■□□□□ 0.73
KARS-204ENST00000564578 KIF14Q15058 1648 aa19.58■□□□□ 0.73
KARS-204ENST00000564578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.58■□□□□ 0.73
KARS-204ENST00000564578 LRRC9Q6ZRR7 1453 aa19.58■□□□□ 0.73
KARS-204ENST00000564578 APLP2Q06481 763 aa19.57■□□□□ 0.72
KARS-204ENST00000564578 ABCA9Q8IUA7 1624 aa19.57■□□□□ 0.72
KARS-204ENST00000564578 MAP3K4Q9Y6R4 1608 aa19.56■□□□□ 0.72
KARS-204ENST00000564578 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
KARS-204ENST00000564578 TTC37Q6PGP7 1564 aa19.54■□□□□ 0.72
KARS-204ENST00000564578 EHBP1L1Q8N3D4 1523 aa19.54■□□□□ 0.72
KARS-204ENST00000564578 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
KARS-204ENST00000564578 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
KARS-204ENST00000564578 PLCH2O75038 1416 aa19.47■□□□□ 0.71
KARS-204ENST00000564578 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
KARS-204ENST00000564578 GPATCH8Q9UKJ3 1502 aaKnown RBP19.45■□□□□ 0.7
KARS-204ENST00000564578 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
KARS-204ENST00000564578 SUPT6HQ7KZ85 1726 aaKnown RBP19.44■□□□□ 0.7
KARS-204ENST00000564578 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
KARS-204ENST00000564578 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
KARS-204ENST00000564578 MYO5CQ9NQX4 1742 aa19.41■□□□□ 0.7
KARS-204ENST00000564578 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
KARS-204ENST00000564578 CDC42BPAQ5VT25 1732 aa19.41■□□□□ 0.7
KARS-204ENST00000564578 FANCAO15360 1455 aa19.4■□□□□ 0.7
KARS-204ENST00000564578 CDC42BPBQ9Y5S2 1711 aa19.4■□□□□ 0.7
KARS-204ENST00000564578 PREX2Q70Z35 1606 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms