RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
TCF4-224ENST00000564403 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
TCF4-224ENST00000564403 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
TCF4-224ENST00000564403 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
TCF4-224ENST00000564403 KANK4Q5T7N3 995 aaPredicted RBP13.61□□□□□ -0.23
TCF4-224ENST00000564403 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
TCF4-224ENST00000564403 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
TCF4-224ENST00000564403 TULP1O00294 542 aaPredicted RBP13.58□□□□□ -0.23
TCF4-224ENST00000564403 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.23
TCF4-224ENST00000564403 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
TCF4-224ENST00000564403 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
TCF4-224ENST00000564403 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
TCF4-224ENST00000564403 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
TCF4-224ENST00000564403 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.24
TCF4-224ENST00000564403 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
TCF4-224ENST00000564403 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.25
TCF4-224ENST00000564403 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
TCF4-224ENST00000564403 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
TCF4-224ENST00000564403 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
TCF4-224ENST00000564403 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.26
TCF4-224ENST00000564403 ITGAEP38570 1179 aa13.44□□□□□ -0.26
TCF4-224ENST00000564403 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
TCF4-224ENST00000564403 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
TCF4-224ENST00000564403 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
TCF4-224ENST00000564403 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
TCF4-224ENST00000564403 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
TCF4-224ENST00000564403 ABCA5Q8WWZ7 1642 aa13.37□□□□□ -0.27
TCF4-224ENST00000564403 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
TCF4-224ENST00000564403 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
TCF4-224ENST00000564403 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
TCF4-224ENST00000564403 PDE4CQ08493 712 aa13.34□□□□□ -0.27
TCF4-224ENST00000564403 CUL7Q14999 1698 aa13.34□□□□□ -0.27
TCF4-224ENST00000564403 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
TCF4-224ENST00000564403 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
TCF4-224ENST00000564403 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
TCF4-224ENST00000564403 PHLDB1Q86UU1 1377 aa13.3□□□□□ -0.28
TCF4-224ENST00000564403 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
TCF4-224ENST00000564403 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
TCF4-224ENST00000564403 TIAM1Q13009 1591 aa13.3□□□□□ -0.28
TCF4-224ENST00000564403 NEFLP07196 543 aa13.29□□□□□ -0.28
TCF4-224ENST00000564403 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
TCF4-224ENST00000564403 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
TCF4-224ENST00000564403 RRBP1Q9P2E9 1410 aaKnown RBP13.28□□□□□ -0.28
TCF4-224ENST00000564403 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.28
TCF4-224ENST00000564403 FBLN2P98095 1184 aa13.26□□□□□ -0.29
TCF4-224ENST00000564403 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
TCF4-224ENST00000564403 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
TCF4-224ENST00000564403 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
TCF4-224ENST00000564403 WDR62O43379 1518 aa13.23□□□□□ -0.29
TCF4-224ENST00000564403 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
TCF4-224ENST00000564403 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
TCF4-224ENST00000564403 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
TCF4-224ENST00000564403 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
TCF4-224ENST00000564403 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.29
TCF4-224ENST00000564403 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.3
TCF4-224ENST00000564403 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
TCF4-224ENST00000564403 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
TCF4-224ENST00000564403 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
TCF4-224ENST00000564403 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
TCF4-224ENST00000564403 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
TCF4-224ENST00000564403 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
TCF4-224ENST00000564403 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
TCF4-224ENST00000564403 SAMD9Q5K651 1589 aa13.18□□□□□ -0.3
TCF4-224ENST00000564403 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
TCF4-224ENST00000564403 RAB3GAP2Q9H2M9 1393 aa13.16□□□□□ -0.3
TCF4-224ENST00000564403 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
TCF4-224ENST00000564403 CFAP43Q8NDM7 1665 aa13.15□□□□□ -0.3
TCF4-224ENST00000564403 KCNA4P22459 653 aa13.15□□□□□ -0.31
TCF4-224ENST00000564403 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
TCF4-224ENST00000564403 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
TCF4-224ENST00000564403 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
TCF4-224ENST00000564403 GTF3C3Q9Y5Q9 886 aa13.13□□□□□ -0.31
TCF4-224ENST00000564403 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
TCF4-224ENST00000564403 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
TCF4-224ENST00000564403 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
TCF4-224ENST00000564403 MAGI3Q5TCQ9 1506 aa13.1□□□□□ -0.31
TCF4-224ENST00000564403 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.31
TCF4-224ENST00000564403 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.31
TCF4-224ENST00000564403 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
TCF4-224ENST00000564403 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
TCF4-224ENST00000564403 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
TCF4-224ENST00000564403 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
TCF4-224ENST00000564403 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.32
TCF4-224ENST00000564403 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
TCF4-224ENST00000564403 PTPRKQ15262 1439 aa13.07□□□□□ -0.32
TCF4-224ENST00000564403 FGD1P98174 961 aa13.07□□□□□ -0.32
TCF4-224ENST00000564403 CHIC2Q9UKJ5 165 aa13.07□□□□□ -0.32
TCF4-224ENST00000564403 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
TCF4-224ENST00000564403 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
TCF4-224ENST00000564403 NEUROD1Q13562 356 aa13.06□□□□□ -0.32
TCF4-224ENST00000564403 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
TCF4-224ENST00000564403 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
TCF4-224ENST00000564403 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
TCF4-224ENST00000564403 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
TCF4-224ENST00000564403 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
TCF4-224ENST00000564403 TPRNQ4KMQ1 711 aa13.04□□□□□ -0.32
TCF4-224ENST00000564403 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
TCF4-224ENST00000564403 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
TCF4-224ENST00000564403 MAGI1Q96QZ7 1491 aaPredicted RBP13.03□□□□□ -0.32
TCF4-224ENST00000564403 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1038.6 ms