RNA–Protein interactions for RNA: ENST00000564145.1

HERC2P4-202, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 3 BASIC

Gene HERC2P4, Length 683 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-202ENST00000564145 FBXO3Q9UK99 471 aa18.1■□□□□ 0.49
HERC2P4-202ENST00000564145 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
HERC2P4-202ENST00000564145 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
HERC2P4-202ENST00000564145 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
HERC2P4-202ENST00000564145 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
HERC2P4-202ENST00000564145 CUX2O14529 1486 aa17.96■□□□□ 0.47
HERC2P4-202ENST00000564145 FXR2P51116 673 aaKnown RBP eCLIP17.95■□□□□ 0.46
HERC2P4-202ENST00000564145 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
HERC2P4-202ENST00000564145 CFTRP13569 1480 aa17.94■□□□□ 0.46
HERC2P4-202ENST00000564145 PIP4P2Q8N4L2 257 aa17.91■□□□□ 0.46
HERC2P4-202ENST00000564145 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
HERC2P4-202ENST00000564145 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
HERC2P4-202ENST00000564145 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
HERC2P4-202ENST00000564145 MIER1Q8N108 512 aa17.84■□□□□ 0.45
HERC2P4-202ENST00000564145 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
HERC2P4-202ENST00000564145 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.44
HERC2P4-202ENST00000564145 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
HERC2P4-202ENST00000564145 PLCD3Q8N3E9 789 aa17.79■□□□□ 0.44
HERC2P4-202ENST00000564145 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
HERC2P4-202ENST00000564145 POTEHQ6S545 545 aa17.76■□□□□ 0.43
HERC2P4-202ENST00000564145 CHADLQ6NUI6 762 aa17.75■□□□□ 0.43
HERC2P4-202ENST00000564145 CREBZFQ9NS37 354 aa17.75■□□□□ 0.43
HERC2P4-202ENST00000564145 VASPP50552 380 aaPredicted RBP17.73■□□□□ 0.43
HERC2P4-202ENST00000564145 WDR62O43379 1518 aa17.7■□□□□ 0.42
HERC2P4-202ENST00000564145 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
HERC2P4-202ENST00000564145 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
HERC2P4-202ENST00000564145 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
HERC2P4-202ENST00000564145 FARP1Q9Y4F1 1045 aaPredicted RBP17.63■□□□□ 0.41
HERC2P4-202ENST00000564145 NPM1P06748 294 aaKnown RBP eCLIP17.61■□□□□ 0.41
HERC2P4-202ENST00000564145 ABCC8Q09428 1581 aa17.58■□□□□ 0.41
HERC2P4-202ENST00000564145 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
HERC2P4-202ENST00000564145 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
HERC2P4-202ENST00000564145 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
HERC2P4-202ENST00000564145 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
HERC2P4-202ENST00000564145 IFT140Q96RY7 1462 aa17.5■□□□□ 0.39
HERC2P4-202ENST00000564145 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
HERC2P4-202ENST00000564145 HAX1O00165 279 aa17.45■□□□□ 0.38
HERC2P4-202ENST00000564145 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
HERC2P4-202ENST00000564145 SOGA1O94964 1423 aa17.43■□□□□ 0.38
HERC2P4-202ENST00000564145 ZNF608Q9ULD9 1512 aaPredicted RBP17.41■□□□□ 0.38
HERC2P4-202ENST00000564145 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
HERC2P4-202ENST00000564145 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
HERC2P4-202ENST00000564145 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
HERC2P4-202ENST00000564145 CUX1P39880 1505 aa17.37■□□□□ 0.37
HERC2P4-202ENST00000564145 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
HERC2P4-202ENST00000564145 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.37
HERC2P4-202ENST00000564145 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
HERC2P4-202ENST00000564145 SPOCK2Q92563 424 aa17.35■□□□□ 0.37
HERC2P4-202ENST00000564145 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
HERC2P4-202ENST00000564145 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
HERC2P4-202ENST00000564145 CD44P16070 742 aaKnown RBP17.32■□□□□ 0.36
HERC2P4-202ENST00000564145 NUBP1P53384 320 aa17.28■□□□□ 0.36
HERC2P4-202ENST00000564145 TARBP1Q13395 1621 aaKnown RBP17.26■□□□□ 0.35
HERC2P4-202ENST00000564145 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
HERC2P4-202ENST00000564145 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
HERC2P4-202ENST00000564145 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
HERC2P4-202ENST00000564145 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
HERC2P4-202ENST00000564145 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
HERC2P4-202ENST00000564145 DCAF8Q5TAQ9 597 aa17.21■□□□□ 0.35
HERC2P4-202ENST00000564145 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
HERC2P4-202ENST00000564145 GSE1Q14687 1217 aa17.18■□□□□ 0.34
HERC2P4-202ENST00000564145 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
HERC2P4-202ENST00000564145 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
HERC2P4-202ENST00000564145 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
HERC2P4-202ENST00000564145 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
HERC2P4-202ENST00000564145 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
HERC2P4-202ENST00000564145 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
HERC2P4-202ENST00000564145 EVX2Q03828 476 aa17.13■□□□□ 0.33
HERC2P4-202ENST00000564145 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
HERC2P4-202ENST00000564145 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
HERC2P4-202ENST00000564145 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
HERC2P4-202ENST00000564145 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
HERC2P4-202ENST00000564145 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
HERC2P4-202ENST00000564145 CLCN6P51797 869 aa17.08■□□□□ 0.32
HERC2P4-202ENST00000564145 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
HERC2P4-202ENST00000564145 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
HERC2P4-202ENST00000564145 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
HERC2P4-202ENST00000564145 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
HERC2P4-202ENST00000564145 KIF27Q86VH2 1401 aa17■□□□□ 0.31
HERC2P4-202ENST00000564145 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
HERC2P4-202ENST00000564145 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
HERC2P4-202ENST00000564145 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
HERC2P4-202ENST00000564145 CHD1O14646 1710 aa16.96■□□□□ 0.31
HERC2P4-202ENST00000564145 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
HERC2P4-202ENST00000564145 IGF1RP08069 1367 aa16.94■□□□□ 0.3
HERC2P4-202ENST00000564145 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
HERC2P4-202ENST00000564145 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
HERC2P4-202ENST00000564145 ARHGEF11O15085 1522 aa16.92■□□□□ 0.3
HERC2P4-202ENST00000564145 PYGBP11216 843 aa16.92■□□□□ 0.3
HERC2P4-202ENST00000564145 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
HERC2P4-202ENST00000564145 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
HERC2P4-202ENST00000564145 KIF12Q96FN5 646 aa16.91■□□□□ 0.3
HERC2P4-202ENST00000564145 GABBR2O75899 941 aa16.9■□□□□ 0.3
HERC2P4-202ENST00000564145 SGIP1Q9BQI5 828 aa16.89■□□□□ 0.29
HERC2P4-202ENST00000564145 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
HERC2P4-202ENST00000564145 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
HERC2P4-202ENST00000564145 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
HERC2P4-202ENST00000564145 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
HERC2P4-202ENST00000564145 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
HERC2P4-202ENST00000564145 MAP3K13O43283 966 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms