RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 NEFLP07196 543 aa28.91■■■□□ 2.22
E4F1-204ENST00000564139 LRRC9Q6ZRR7 1453 aa28.9■■■□□ 2.22
E4F1-204ENST00000564139 SIN3AQ96ST3 1273 aa28.9■■■□□ 2.22
E4F1-204ENST00000564139 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
E4F1-204ENST00000564139 TIMELESSQ9UNS1 1208 aa28.89■■■□□ 2.22
E4F1-204ENST00000564139 CCER2I3L3R5 266 aa28.87■■■□□ 2.21
E4F1-204ENST00000564139 PHLDB1Q86UU1 1377 aa28.87■■■□□ 2.21
E4F1-204ENST00000564139 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
E4F1-204ENST00000564139 RBM19Q9Y4C8 960 aaKnown RBP28.83■■■□□ 2.21
E4F1-204ENST00000564139 CFTRP13569 1480 aa28.82■■■□□ 2.2
E4F1-204ENST00000564139 IGF1RP08069 1367 aa28.79■■■□□ 2.2
E4F1-204ENST00000564139 BCL11AQ9H165 835 aa28.79■■■□□ 2.2
E4F1-204ENST00000564139 FAM50AQ14320 339 aaKnown RBP28.78■■■□□ 2.2
E4F1-204ENST00000564139 ANP32CO43423 234 aa28.77■■■□□ 2.2
E4F1-204ENST00000564139 CFAP43Q8NDM7 1665 aa28.76■■■□□ 2.19
E4F1-204ENST00000564139 TRIM52Q96A61 297 aa28.75■■■□□ 2.19
E4F1-204ENST00000564139 FHAD1B1AJZ9 1412 aa28.72■■■□□ 2.19
E4F1-204ENST00000564139 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
E4F1-204ENST00000564139 CARMIL1Q5VZK9 1371 aa28.69■■■□□ 2.18
E4F1-204ENST00000564139 PCF11O94913 1555 aaKnown RBP28.66■■■□□ 2.18
E4F1-204ENST00000564139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.178e-7■■■■□ 20
E4F1-204ENST00000564139 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
E4F1-204ENST00000564139 TONSLQ96HA7 1378 aa28.55■■■□□ 2.16
E4F1-204ENST00000564139 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
E4F1-204ENST00000564139 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
E4F1-204ENST00000564139 MSH5O43196 834 aa28.49■■■□□ 2.15
E4F1-204ENST00000564139 P3H3Q8IVL6 736 aa28.48■■■□□ 2.15
E4F1-204ENST00000564139 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
E4F1-204ENST00000564139 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
E4F1-204ENST00000564139 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
E4F1-204ENST00000564139 FHOD3Q2V2M9 1422 aa28.45■■■□□ 2.15
E4F1-204ENST00000564139 FANCIQ9NVI1 1328 aa28.44■■■□□ 2.14
E4F1-204ENST00000564139 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.141e-6■■■■■ 73.8
E4F1-204ENST00000564139 FGD6Q6ZV73 1430 aa28.43■■■□□ 2.14
E4F1-204ENST00000564139 UACAQ9BZF9 1416 aa28.43■■■□□ 2.14
E4F1-204ENST00000564139 EFCAB5A4FU69 1503 aa28.42■■■□□ 2.14
E4F1-204ENST00000564139 HFM1A2PYH4 1435 aa28.39■■■□□ 2.14
E4F1-204ENST00000564139 HNRNPUQ00839 825 aaKnown RBP eCLIP28.39■■■□□ 2.14
E4F1-204ENST00000564139 CDK11AQ9UQ88 783 aaPredicted RBP28.38■■■□□ 2.13
E4F1-204ENST00000564139 PTPN23Q9H3S7 1636 aa28.36■■■□□ 2.13
E4F1-204ENST00000564139 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
E4F1-204ENST00000564139 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
E4F1-204ENST00000564139 PTPRKQ15262 1439 aa28.32■■■□□ 2.12
E4F1-204ENST00000564139 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
E4F1-204ENST00000564139 ERICH6BQ5W0A0 696 aa28.29■■■□□ 2.12
E4F1-204ENST00000564139 NAIPQ13075 1403 aa28.26■■■□□ 2.12
E4F1-204ENST00000564139 FMN1Q68DA7 1419 aa28.25■■■□□ 2.11
E4F1-204ENST00000564139 ERICH6Q7L0X2 663 aa28.24■■■□□ 2.11
E4F1-204ENST00000564139 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
E4F1-204ENST00000564139 MTUS2Q5JR59 1369 aa28.23■■■□□ 2.11
E4F1-204ENST00000564139 WASHC2AQ641Q2 1341 aa28.22■■■□□ 2.11
E4F1-204ENST00000564139 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
E4F1-204ENST00000564139 PPP4R2Q9NY27 417 aa28.19■■■□□ 2.1
E4F1-204ENST00000564139 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
E4F1-204ENST00000564139 HSPA5P11021 654 aaKnown RBP28.17■■■□□ 2.1
E4F1-204ENST00000564139 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
E4F1-204ENST00000564139 NCOA2Q15596 1464 aa28.17■■■□□ 2.1
E4F1-204ENST00000564139 CUL7Q14999 1698 aa28.16■■■□□ 2.1
E4F1-204ENST00000564139 MYOM3Q5VTT5 1437 aa28.16■■■□□ 2.1
E4F1-204ENST00000564139 CNTLNQ9NXG0 1405 aa28.13■■■□□ 2.09
E4F1-204ENST00000564139 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
E4F1-204ENST00000564139 DNMBPQ6XZF7 1577 aa28.09■■■□□ 2.09
E4F1-204ENST00000564139 FANCD2Q9BXW9 1451 aa28.09■■■□□ 2.09
E4F1-204ENST00000564139 EIF4G2P78344 907 aaKnown RBP eCLIP28.08■■■□□ 2.09
E4F1-204ENST00000564139 LRRIQ1Q96JM4 1722 aa28.07■■■□□ 2.08
E4F1-204ENST00000564139 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
E4F1-204ENST00000564139 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
E4F1-204ENST00000564139 CCDC184Q52MB2 194 aa28.06■■■□□ 2.08
E4F1-204ENST00000564139 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
E4F1-204ENST00000564139 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
E4F1-204ENST00000564139 GRIN2BQ13224 1484 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 EHBP1L1Q8N3D4 1523 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
E4F1-204ENST00000564139 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
E4F1-204ENST00000564139 DENND4BO75064 1496 aaPredicted RBP28.03■■■□□ 2.08
E4F1-204ENST00000564139 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.07
E4F1-204ENST00000564139 ZBED9Q6R2W3 1325 aa28■■■□□ 2.07
E4F1-204ENST00000564139 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
E4F1-204ENST00000564139 UGGT2Q9NYU1 1516 aa28■■■□□ 2.07
E4F1-204ENST00000564139 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
E4F1-204ENST00000564139 NCOA1Q15788 1441 aa27.99■■■□□ 2.07
E4F1-204ENST00000564139 CCDC7Q96M83 1385 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 RRP7BPQ9NSQ0 103 aa27.97■■■□□ 2.07
E4F1-204ENST00000564139 B4GALNT3Q6L9W6 998 aa27.96■■■□□ 2.07
E4F1-204ENST00000564139 FAM9BQ8IZU0 186 aa27.95■■■□□ 2.07
E4F1-204ENST00000564139 AKNAQ7Z591 1439 aa27.95■■■□□ 2.06
E4F1-204ENST00000564139 TCOF1Q13428 1488 aaKnown RBP27.94■■■□□ 2.06
E4F1-204ENST00000564139 MRS2Q9HD23 443 aa27.94■■■□□ 2.06
E4F1-204ENST00000564139 C11orf95C9JLR9 678 aaPredicted RBP27.92■■■□□ 2.06
E4F1-204ENST00000564139 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
E4F1-204ENST00000564139 CHIC2Q9UKJ5 165 aa27.89■■■□□ 2.06
E4F1-204ENST00000564139 KDM6BO15054 1643 aa27.89■■■□□ 2.05
E4F1-204ENST00000564139 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
E4F1-204ENST00000564139 MPHOSPH9Q99550 1183 aa27.86■■■□□ 2.05
E4F1-204ENST00000564139 DEKP35659 375 aaKnown RBP27.84■■■□□ 2.05
E4F1-204ENST00000564139 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.04
E4F1-204ENST00000564139 NOP58Q9Y2X3 529 aaKnown RBP27.81■■■□□ 2.04
E4F1-204ENST00000564139 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
E4F1-204ENST00000564139 SMG6Q86US8 1419 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms